RNA–Protein interactions for RNA: ENST00000339877.8

RBPMS-203, Transcript of RNA binding protein, mRNA processing factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBPMS, Length 1,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBPMS-203ENST00000339877 AMPHP49418 695 aa24.24■■□□□ 1.47
RBPMS-203ENST00000339877 ZCRB1Q8TBF4 217 aaKnown RBP24.24■■□□□ 1.47
RBPMS-203ENST00000339877 COL24A1Q17RW2 1714 aa24.24■■□□□ 1.47
RBPMS-203ENST00000339877 HOXC9P31274 260 aa24.22■■□□□ 1.47
RBPMS-203ENST00000339877 NLGN2Q8NFZ4 835 aa24.22■■□□□ 1.47
RBPMS-203ENST00000339877 CCNL1Q9UK58 526 aaPredicted RBP24.22■■□□□ 1.47
RBPMS-203ENST00000339877 MAP3K19Q56UN5 1328 aa24.21■■□□□ 1.47
RBPMS-203ENST00000339877 MSH5O43196 834 aa24.21■■□□□ 1.47
RBPMS-203ENST00000339877 GRIN3BO60391 1043 aa24.2■■□□□ 1.46
RBPMS-203ENST00000339877 DOT1LQ8TEK3 1739 aa24.2■■□□□ 1.46
RBPMS-203ENST00000339877 NSD2O96028 1365 aa24.19■■□□□ 1.46
RBPMS-203ENST00000339877 LY75O60449 1722 aa24.19■■□□□ 1.46
RBPMS-203ENST00000339877 TUBGCP6Q96RT7 1819 aa24.19■■□□□ 1.46
RBPMS-203ENST00000339877 GOLGB1Q14789 3259 aaKnown RBP24.19■■□□□ 1.46
RBPMS-203ENST00000339877 USP47Q96K76 1375 aa24.18■■□□□ 1.46
RBPMS-203ENST00000339877 SLC24A1O60721 1099 aa24.16■■□□□ 1.46
RBPMS-203ENST00000339877 HMGB2P26583 209 aaKnown RBP24.16■■□□□ 1.46
RBPMS-203ENST00000339877 FBLN1P23142 703 aa24.15■■□□□ 1.46
RBPMS-203ENST00000339877 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
RBPMS-203ENST00000339877 COL23A1Q86Y22 540 aaPredicted RBP24.15■■□□□ 1.46
RBPMS-203ENST00000339877 CGNL1Q0VF96 1302 aa24.15■■□□□ 1.46
RBPMS-203ENST00000339877 MEGF6O75095 1541 aa24.14■■□□□ 1.46
RBPMS-203ENST00000339877 YBX3P16989 372 aaKnown RBP eCLIP24.13■■□□□ 1.45
RBPMS-203ENST00000339877 RAPGEF4Q8WZA2 1011 aa24.13■■□□□ 1.45
RBPMS-203ENST00000339877 RTL1A6NKG5 1358 aa24.13■■□□□ 1.45
RBPMS-203ENST00000339877 TONSLQ96HA7 1378 aa24.13■■□□□ 1.45
RBPMS-203ENST00000339877 NBPF6Q5VWK0 638 aa24.12■■□□□ 1.45
RBPMS-203ENST00000339877 NBPF4Q96M43 638 aa24.12■■□□□ 1.45
RBPMS-203ENST00000339877 SHANK3Q9BYB0 1731 aa24.12■■□□□ 1.45
RBPMS-203ENST00000339877 RGPD2P0DJD1 1756 aa24.12■■□□□ 1.45
RBPMS-203ENST00000339877 FLAD1Q8NFF5 587 aa24.1■■□□□ 1.45
RBPMS-203ENST00000339877 TESK2Q96S53 571 aa24.1■■□□□ 1.45
RBPMS-203ENST00000339877 SMG6Q86US8 1419 aaKnown RBP24.1■■□□□ 1.45
RBPMS-203ENST00000339877 ST20-MTHFSA0A0A6YYL1 179 aa24.1■■□□□ 1.45
RBPMS-203ENST00000339877 TATP17735 454 aaPredicted RBP24.1■■□□□ 1.45
RBPMS-203ENST00000339877 MSL1Q68DK7 614 aa24.1■■□□□ 1.45
RBPMS-203ENST00000339877 RRS1Q15050 365 aaKnown RBP24.09■■□□□ 1.45
RBPMS-203ENST00000339877 USHBP1Q8N6Y0 703 aa24.09■■□□□ 1.45
RBPMS-203ENST00000339877 CD2APQ9Y5K6 639 aa24.08■■□□□ 1.44
RBPMS-203ENST00000339877 PCDH11XQ9BZA7 1347 aa24.06■■□□□ 1.44
RBPMS-203ENST00000339877 PCDH11YQ9BZA8 1340 aa24.06■■□□□ 1.44
RBPMS-203ENST00000339877 FYB1O15117 783 aa24.05■■□□□ 1.44
RBPMS-203ENST00000339877 GGNBP2Q9H3C7 697 aa24.05■■□□□ 1.44
RBPMS-203ENST00000339877 C5P01031 1676 aa24.03■■□□□ 1.44
RBPMS-203ENST00000339877 PALLDQ8WX93 1383 aa24.03■■□□□ 1.44
RBPMS-203ENST00000339877 IFFO2Q5TF58 517 aa24.03■■□□□ 1.44
RBPMS-203ENST00000339877 MPRIPQ6WCQ1 1025 aa24.03■■□□□ 1.44
RBPMS-203ENST00000339877 CEP350Q5VT06 3117 aa24.02■■□□□ 1.44
RBPMS-203ENST00000339877 ATP10DQ9P241 1426 aa24.02■■□□□ 1.44
RBPMS-203ENST00000339877 SMARCC1Q92922 1105 aaPredicted RBP24.02■■□□□ 1.44
RBPMS-203ENST00000339877 INSRP06213 1382 aa24.01■■□□□ 1.43
RBPMS-203ENST00000339877 HSP90AB2PQ58FF8 381 aa24.01■■□□□ 1.43
RBPMS-203ENST00000339877 GPBP1L1Q9HC44 474 aaPredicted RBP24.01■■□□□ 1.43
RBPMS-203ENST00000339877 AK7Q96M32 723 aa24■■□□□ 1.43
RBPMS-203ENST00000339877 TMF1P82094 1093 aa23.99■■□□□ 1.43
RBPMS-203ENST00000339877 FLT4P35916 1363 aa23.98■■□□□ 1.43
RBPMS-203ENST00000339877 KIF24Q5T7B8 1368 aa23.98■■□□□ 1.43
RBPMS-203ENST00000339877 TAF1LQ8IZX4 1826 aa23.97■■□□□ 1.43
RBPMS-203ENST00000339877 CYP27B1O15528 508 aa23.97■■□□□ 1.43
RBPMS-203ENST00000339877 NSD3Q9BZ95 1437 aa23.95■■□□□ 1.42
RBPMS-203ENST00000339877 C4BP0C0L5 1744 aa23.95■■□□□ 1.42
RBPMS-203ENST00000339877 PHF14O94880 888 aa23.94■■□□□ 1.42
RBPMS-203ENST00000339877 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.93■■□□□ 1.42
RBPMS-203ENST00000339877 ZNF526Q8TF50 670 aaPredicted RBP23.93■■□□□ 1.42
RBPMS-203ENST00000339877 IGSF1Q8N6C5 1336 aa23.93■■□□□ 1.42
RBPMS-203ENST00000339877 ADCY9O60503 1353 aa23.92■■□□□ 1.42
RBPMS-203ENST00000339877 CDCA8Q53HL2 280 aa23.92■■□□□ 1.42
RBPMS-203ENST00000339877 PIGBQ92521 554 aa23.92■■□□□ 1.42
RBPMS-203ENST00000339877 SSFA2P28290 1259 aa23.91■■□□□ 1.42
RBPMS-203ENST00000339877 SPG7Q9UQ90 795 aa23.91■■□□□ 1.42
RBPMS-203ENST00000339877 ITGB4P16144 1822 aa23.91■■□□□ 1.42
RBPMS-203ENST00000339877 HSPA6P17066 643 aa23.9■■□□□ 1.42
RBPMS-203ENST00000339877 NKX1-1Q15270 411 aaPredicted RBP23.9■■□□□ 1.42
RBPMS-203ENST00000339877 AMIGO3Q86WK7 504 aa23.9■■□□□ 1.42
RBPMS-203ENST00000339877 KIF20BQ96Q89 1820 aa23.89■■□□□ 1.41
RBPMS-203ENST00000339877 LOC102724428A0A0B4J2F2 783 aa23.88■■□□□ 1.41
RBPMS-203ENST00000339877 SIK1P57059 783 aa23.88■■□□□ 1.41
RBPMS-203ENST00000339877 WWC3Q9ULE0 1092 aa23.88■■□□□ 1.41
RBPMS-203ENST00000339877 TOGARAM1Q9Y4F4 1720 aa23.88■■□□□ 1.41
RBPMS-203ENST00000339877 UBR3Q6ZT12 1888 aa23.88■■□□□ 1.41
RBPMS-203ENST00000339877 SMIM5Q71RC9 77 aa23.87■■□□□ 1.41
RBPMS-203ENST00000339877 EMILIN1Q9Y6C2 1016 aa23.87■■□□□ 1.41
RBPMS-203ENST00000339877 PKD1L3Q7Z443 1732 aa23.87■■□□□ 1.41
RBPMS-203ENST00000339877 PPM1GO15355 546 aaPredicted RBP23.86■■□□□ 1.41
RBPMS-203ENST00000339877 TMOD3Q9NYL9 352 aa23.86■■□□□ 1.41
RBPMS-203ENST00000339877 LINC00116Q8NCU8 138 aa23.85■■□□□ 1.41
RBPMS-203ENST00000339877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.84■■□□□ 1.41
RBPMS-203ENST00000339877 NCAPD2Q15021 1401 aa23.83■■□□□ 1.41
RBPMS-203ENST00000339877 GNPATO15228 680 aa23.83■■□□□ 1.4
RBPMS-203ENST00000339877 ATP6V1AP38606 617 aa23.83■■□□□ 1.4
RBPMS-203ENST00000339877 CARD14Q9BXL6 1004 aa23.83■■□□□ 1.4
RBPMS-203ENST00000339877 IFNL2Q8IZJ0 200 aa23.82■■□□□ 1.4
RBPMS-203ENST00000339877 ASAP1Q9ULH1 1129 aa23.82■■□□□ 1.4
RBPMS-203ENST00000339877 WASHC2AQ641Q2 1341 aa23.82■■□□□ 1.4
RBPMS-203ENST00000339877 MAP2P11137 1827 aaKnown RBP23.81■■□□□ 1.4
RBPMS-203ENST00000339877 EYA1Q99502 592 aa23.81■■□□□ 1.4
RBPMS-203ENST00000339877 ITPK1Q13572 414 aa23.8■■□□□ 1.4
RBPMS-203ENST00000339877 KIF3CO14782 793 aa23.79■■□□□ 1.4
RBPMS-203ENST00000339877 MMP10P09238 476 aa23.79■■□□□ 1.4
RBPMS-203ENST00000339877 PCGF6Q9BYE7 350 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms