RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 PRKAR2BP31323 418 aa19.91■□□□□ 0.78
UPK3B-202ENST00000334348 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
UPK3B-202ENST00000334348 MBD3O95983 291 aa19.91■□□□□ 0.78
UPK3B-202ENST00000334348 IFT57Q9NWB7 429 aa19.91■□□□□ 0.78
UPK3B-202ENST00000334348 LRRC7Q96NW7 1537 aa19.9■□□□□ 0.78
UPK3B-202ENST00000334348 GNAI1P63096 354 aa19.9■□□□□ 0.78
UPK3B-202ENST00000334348 SRPK2P78362 688 aaKnown RBP19.9■□□□□ 0.78
UPK3B-202ENST00000334348 CASC1Q6TDU7 716 aa19.9■□□□□ 0.78
UPK3B-202ENST00000334348 ANKRD26Q9UPS8 1709 aa19.9■□□□□ 0.78
UPK3B-202ENST00000334348 ZFYVE9O95405 1425 aa19.9■□□□□ 0.78
UPK3B-202ENST00000334348 NFE2L2Q16236 605 aa19.9■□□□□ 0.78
UPK3B-202ENST00000334348 VGFO15240 615 aaPredicted RBP19.89■□□□□ 0.77
UPK3B-202ENST00000334348 ATAD2Q6PL18 1390 aa19.89■□□□□ 0.77
UPK3B-202ENST00000334348 TNRQ92752 1358 aa19.89■□□□□ 0.77
UPK3B-202ENST00000334348 ZNF853P0CG23 659 aa19.88■□□□□ 0.77
UPK3B-202ENST00000334348 NSFL1CQ9UNZ2 370 aaKnown RBP19.88■□□□□ 0.77
UPK3B-202ENST00000334348 SPATA31D1Q6ZQQ2 1576 aa19.88■□□□□ 0.77
UPK3B-202ENST00000334348 C16orf71Q8IYS4 520 aaPredicted RBP19.88■□□□□ 0.77
UPK3B-202ENST00000334348 SDSP20132 328 aa19.87■□□□□ 0.77
UPK3B-202ENST00000334348 PIK3C2BO00750 1634 aa19.87■□□□□ 0.77
UPK3B-202ENST00000334348 REC8O95072 547 aa19.87■□□□□ 0.77
UPK3B-202ENST00000334348 SAFB2Q14151 953 aaKnown RBP eCLIP19.87■□□□□ 0.77
UPK3B-202ENST00000334348 NUTM2DQ5VT03 806 aaPredicted RBP19.87■□□□□ 0.77
UPK3B-202ENST00000334348 CD163L1Q9NR16 1453 aa19.87■□□□□ 0.77
UPK3B-202ENST00000334348 TWISTNBQ3B726 338 aaPredicted RBP19.86■□□□□ 0.77
UPK3B-202ENST00000334348 MBIPQ9NS73 344 aa19.86■□□□□ 0.77
UPK3B-202ENST00000334348 THUMPD2Q9BTF0 503 aaKnown RBP19.86■□□□□ 0.77
UPK3B-202ENST00000334348 ELL2O00472 640 aaPredicted RBP19.85■□□□□ 0.77
UPK3B-202ENST00000334348 KIAA2012Q0VF49 1180 aa19.85■□□□□ 0.77
UPK3B-202ENST00000334348 ANKRD44Q8N8A2 993 aa19.85■□□□□ 0.77
UPK3B-202ENST00000334348 PHACTR3Q96KR7 559 aa19.85■□□□□ 0.77
UPK3B-202ENST00000334348 KNDC1Q76NI1 1749 aa19.84■□□□□ 0.77
UPK3B-202ENST00000334348 CHAMP1Q96JM3 812 aa19.84■□□□□ 0.77
UPK3B-202ENST00000334348 TSPY26PQ9H489 355 aa19.84■□□□□ 0.77
UPK3B-202ENST00000334348 RPAP2Q8IXW5 612 aaPredicted RBP19.83■□□□□ 0.77
UPK3B-202ENST00000334348 RNF214Q8ND24 703 aa19.83■□□□□ 0.77
UPK3B-202ENST00000334348 MYRIPQ8NFW9 859 aa19.83■□□□□ 0.77
UPK3B-202ENST00000334348 OTUD7AQ8TE49 926 aaPredicted RBP19.83■□□□□ 0.77
UPK3B-202ENST00000334348 CCDC94Q9BW85 323 aaPredicted RBP19.83■□□□□ 0.77
UPK3B-202ENST00000334348 BRD1O95696 1058 aa19.83■□□□□ 0.76
UPK3B-202ENST00000334348 HDGFL2Q7Z4V5 671 aaPredicted RBP19.83■□□□□ 0.76
UPK3B-202ENST00000334348 PTMAP06454 111 aaKnown RBP19.82■□□□□ 0.76
UPK3B-202ENST00000334348 ERC2O15083 957 aa19.81■□□□□ 0.76
UPK3B-202ENST00000334348 C8orf58Q8NAV2 365 aa19.81■□□□□ 0.76
UPK3B-202ENST00000334348 SYAP1Q96A49 352 aaPredicted RBP19.81■□□□□ 0.76
UPK3B-202ENST00000334348 SLC52A1Q9NWF4 448 aa19.81■□□□□ 0.76
UPK3B-202ENST00000334348 STAG3Q9UJ98 1225 aa19.81■□□□□ 0.76
UPK3B-202ENST00000334348 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.81■□□□□ 0.76
UPK3B-202ENST00000334348 NEXMIFQ5QGS0 1516 aa19.81■□□□□ 0.76
UPK3B-202ENST00000334348 MCM2P49736 904 aa19.81■□□□□ 0.76
UPK3B-202ENST00000334348 HSPA2P54652 639 aa19.81■□□□□ 0.76
UPK3B-202ENST00000334348 ATP10DQ9P241 1426 aa19.81■□□□□ 0.76
UPK3B-202ENST00000334348 TMX3Q96JJ7 454 aa19.8■□□□□ 0.76
UPK3B-202ENST00000334348 POLKQ9UBT6 870 aa19.8■□□□□ 0.76
UPK3B-202ENST00000334348 PRIMPOLQ96LW4 560 aa19.8■□□□□ 0.76
UPK3B-202ENST00000334348 MYO5BQ9ULV0 1848 aa19.79■□□□□ 0.76
UPK3B-202ENST00000334348 HMOX1P09601 288 aa19.79■□□□□ 0.76
UPK3B-202ENST00000334348 CUL4AQ13619 759 aa19.79■□□□□ 0.76
UPK3B-202ENST00000334348 CEP85Q6P2H3 762 aa19.79■□□□□ 0.76
UPK3B-202ENST00000334348 STK26Q9P289 416 aa19.78■□□□□ 0.76
UPK3B-202ENST00000334348 PHF14O94880 888 aa19.78■□□□□ 0.76
UPK3B-202ENST00000334348 LMOD3Q0VAK6 560 aa19.78■□□□□ 0.76
UPK3B-202ENST00000334348 UTP14CQ5TAP6 766 aaKnown RBP19.78■□□□□ 0.76
UPK3B-202ENST00000334348 FOXD4L5Q5VV16 416 aaPredicted RBP19.78■□□□□ 0.76
UPK3B-202ENST00000334348 FOXD4L4Q8WXT5 416 aaPredicted RBP19.78■□□□□ 0.76
UPK3B-202ENST00000334348 NEK4P51957 841 aa19.77■□□□□ 0.76
UPK3B-202ENST00000334348 HMGN5P82970 282 aaKnown RBP19.77■□□□□ 0.76
UPK3B-202ENST00000334348 UVSSAQ2YD98 709 aa19.77■□□□□ 0.76
UPK3B-202ENST00000334348 ARID3AQ99856 593 aa19.77■□□□□ 0.76
UPK3B-202ENST00000334348 SETD1BQ9UPS6 1966 aaKnown RBP19.77■□□□□ 0.76
UPK3B-202ENST00000334348 GTF2F1P35269 517 aaKnown RBP eCLIP19.77■□□□□ 0.75
UPK3B-202ENST00000334348 PIBF1Q8WXW3 757 aa19.77■□□□□ 0.75
UPK3B-202ENST00000334348 SMARCA5O60264 1052 aaPredicted RBP19.76■□□□□ 0.75
UPK3B-202ENST00000334348 FAM184AQ8NB25 1140 aa19.76■□□□□ 0.75
UPK3B-202ENST00000334348 INTS4Q96HW7 963 aaKnown RBP19.76■□□□□ 0.75
UPK3B-202ENST00000334348 MINK1Q8N4C8 1332 aaPredicted RBP19.76■□□□□ 0.75
UPK3B-202ENST00000334348 DNTTIP2Q5QJE6 756 aaKnown RBP19.76■□□□□ 0.75
UPK3B-202ENST00000334348 OSBPL3Q9H4L5 887 aa19.75■□□□□ 0.75
UPK3B-202ENST00000334348 DMTNQ08495 405 aa19.75■□□□□ 0.75
UPK3B-202ENST00000334348 TMEM131LA2VDJ0 1609 aa19.74■□□□□ 0.75
UPK3B-202ENST00000334348 A2ML1A8K2U0 1454 aa19.74■□□□□ 0.75
UPK3B-202ENST00000334348 IL13P35225 146 aa19.73■□□□□ 0.75
UPK3B-202ENST00000334348 NOLC1Q14978 699 aaKnown RBP eCLIP19.73■□□□□ 0.75
UPK3B-202ENST00000334348 PRAM1Q96QH2 718 aa19.73■□□□□ 0.75
UPK3B-202ENST00000334348 RTL1A6NKG5 1358 aa19.73■□□□□ 0.75
UPK3B-202ENST00000334348 YTHDC2Q9H6S0 1430 aaKnown RBP19.73■□□□□ 0.75
UPK3B-202ENST00000334348 KIF20BQ96Q89 1820 aa19.73■□□□□ 0.75
UPK3B-202ENST00000334348 CEP170BQ9Y4F5 1589 aaPredicted RBP19.73■□□□□ 0.75
UPK3B-202ENST00000334348 CABP1Q9NZU7 370 aa19.73■□□□□ 0.75
UPK3B-202ENST00000334348 CPSF1Q10570 1443 aaKnown RBP19.73■□□□□ 0.75
UPK3B-202ENST00000334348 FBLN1P23142 703 aa19.72■□□□□ 0.75
UPK3B-202ENST00000334348 PRDM10Q9NQV6 1147 aa19.72■□□□□ 0.75
UPK3B-202ENST00000334348 RGS12O14924 1447 aa19.72■□□□□ 0.75
UPK3B-202ENST00000334348 RIMS2Q9UQ26 1411 aa19.72■□□□□ 0.75
UPK3B-202ENST00000334348 UBR1Q8IWV7 1749 aa19.72■□□□□ 0.75
UPK3B-202ENST00000334348 LTKP29376 864 aa19.72■□□□□ 0.75
UPK3B-202ENST00000334348 ZNF710Q8N1W2 664 aa19.72■□□□□ 0.75
UPK3B-202ENST00000334348 APBB1O00213 710 aa19.71■□□□□ 0.75
UPK3B-202ENST00000334348 ZSCAN20P17040 1043 aaPredicted RBP19.71■□□□□ 0.75
UPK3B-202ENST00000334348 HAP1P54257 671 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms