RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 COL4A5P29400 1685 aa3.73□□□□□ -1.81
RGPD6-201ENST00000329516 BTAF1O14981 1849 aa3.73□□□□□ -1.81
RGPD6-201ENST00000329516 LY75O60449 1722 aa3.73□□□□□ -1.81
RGPD6-201ENST00000329516 OTOGQ6ZRI0 2925 aa3.73□□□□□ -1.81
RGPD6-201ENST00000329516 A0A1W2PP64 1363 aa3.73□□□□□ -1.81
RGPD6-201ENST00000329516 ANKRD31Q8N7Z5 1873 aa3.73□□□□□ -1.81
RGPD6-201ENST00000329516 TNRC6CQ9HCJ0 1690 aaKnown RBP3.72□□□□□ -1.81
RGPD6-201ENST00000329516 TSGA10IPQ3SY00 556 aa3.72□□□□□ -1.81
RGPD6-201ENST00000329516 KIF13BQ9NQT8 1826 aa3.72□□□□□ -1.81
RGPD6-201ENST00000329516 BACH2Q9BYV9 841 aa3.72□□□□□ -1.81
RGPD6-201ENST00000329516 UTP20O75691 2785 aaKnown RBP3.71□□□□□ -1.81
RGPD6-201ENST00000329516 ARFGEF1Q9Y6D6 1849 aa3.71□□□□□ -1.82
RGPD6-201ENST00000329516 UBE2Q2Q8WVN8 375 aa3.71□□□□□ -1.82
RGPD6-201ENST00000329516 ITGAEP38570 1179 aa3.71□□□□□ -1.82
RGPD6-201ENST00000329516 DDX10Q13206 875 aaKnown RBP3.71□□□□□ -1.82
RGPD6-201ENST00000329516 TANC1Q9C0D5 1861 aa3.71□□□□□ -1.82
RGPD6-201ENST00000329516 IDI1Q13907 227 aa3.71□□□□□ -1.82
RGPD6-201ENST00000329516 BRAPQ7Z569 592 aa3.71□□□□□ -1.82
RGPD6-201ENST00000329516 CEMIPQ8WUJ3 1361 aa3.7□□□□□ -1.82
RGPD6-201ENST00000329516 NSFL1CQ9UNZ2 370 aaKnown RBP3.7□□□□□ -1.82
RGPD6-201ENST00000329516 CLEC17AQ6ZS10 378 aa3.7□□□□□ -1.82
RGPD6-201ENST00000329516 JARID2Q92833 1246 aaPredicted RBP3.7□□□□□ -1.82
RGPD6-201ENST00000329516 HSD3B7Q9H2F3 369 aa3.7□□□□□ -1.82
RGPD6-201ENST00000329516 MED15Q96RN5 788 aa3.7□□□□□ -1.82
RGPD6-201ENST00000329516 MYH7P12883 1935 aa3.7□□□□□ -1.82
RGPD6-201ENST00000329516 EDIL3O43854 480 aa3.7□□□□□ -1.82
RGPD6-201ENST00000329516 CHGBP05060 677 aa3.69□□□□□ -1.82
RGPD6-201ENST00000329516 NUP98P52948 1817 aa3.69□□□□□ -1.82
RGPD6-201ENST00000329516 NSD3Q9BZ95 1437 aa3.69□□□□□ -1.82
RGPD6-201ENST00000329516 PLXNA1Q9UIW2 1896 aa3.69□□□□□ -1.82
RGPD6-201ENST00000329516 FAM53CQ9NYF3 392 aa3.69□□□□□ -1.82
RGPD6-201ENST00000329516 PHACTR3Q96KR7 559 aa3.69□□□□□ -1.82
RGPD6-201ENST00000329516 ADAMTS8Q9UP79 889 aa3.68□□□□□ -1.82
RGPD6-201ENST00000329516 RRP7BPQ9NSQ0 103 aa3.68□□□□□ -1.82
RGPD6-201ENST00000329516 IRS2Q9Y4H2 1338 aa3.68□□□□□ -1.82
RGPD6-201ENST00000329516 HNRNPMP52272 730 aaKnown RBP eCLIP3.68□□□□□ -1.82
RGPD6-201ENST00000329516 PKP1Q13835 747 aa3.68□□□□□ -1.82
RGPD6-201ENST00000329516 DCCP43146 1447 aa3.68□□□□□ -1.82
RGPD6-201ENST00000329516 SENP3-EIF4A1A0A087X0R7 540 aa3.67□□□□□ -1.82
RGPD6-201ENST00000329516 BRPF1P55201 1214 aaPredicted RBP3.67□□□□□ -1.82
RGPD6-201ENST00000329516 BRD4O60885 1362 aaPredicted RBP3.67□□□□□ -1.82
RGPD6-201ENST00000329516 NKRFO15226 690 aaKnown RBP eCLIP3.67□□□□□ -1.82
RGPD6-201ENST00000329516 RIPK4P57078 832 aa3.67□□□□□ -1.82
RGPD6-201ENST00000329516 KRT24Q2M2I5 525 aa3.67□□□□□ -1.82
RGPD6-201ENST00000329516 FUCA2Q9BTY2 467 aa3.67□□□□□ -1.82
RGPD6-201ENST00000329516 C1orf167Q5SNV9 1468 aa3.67□□□□□ -1.82
RGPD6-201ENST00000329516 PHIPQ8WWQ0 1821 aa3.67□□□□□ -1.82
RGPD6-201ENST00000329516 NEFLP07196 543 aa3.67□□□□□ -1.82
RGPD6-201ENST00000329516 USP16Q9Y5T5 823 aa3.67□□□□□ -1.82
RGPD6-201ENST00000329516 ZRANB1Q9UGI0 708 aa3.67□□□□□ -1.82
RGPD6-201ENST00000329516 SCN9AQ15858 1988 aa3.67□□□□□ -1.82
RGPD6-201ENST00000329516 TRIM52Q96A61 297 aa3.66□□□□□ -1.82
RGPD6-201ENST00000329516 TTBK1Q5TCY1 1321 aaPredicted RBP3.66□□□□□ -1.82
RGPD6-201ENST00000329516 SBNO1A3KN83 1393 aa3.66□□□□□ -1.82
RGPD6-201ENST00000329516 SLFN5Q08AF3 891 aa3.66□□□□□ -1.82
RGPD6-201ENST00000329516 C14orf93Q9H972 538 aaKnown RBP3.66□□□□□ -1.82
RGPD6-201ENST00000329516 BRPF3Q9ULD4 1205 aa3.66□□□□□ -1.82
RGPD6-201ENST00000329516 WDR33Q9C0J8 1336 aaKnown RBP3.66□□□□□ -1.82
RGPD6-201ENST00000329516 PSME4Q14997 1843 aa3.66□□□□□ -1.82
RGPD6-201ENST00000329516 MYH13Q9UKX3 1938 aa3.65□□□□□ -1.82
RGPD6-201ENST00000329516 GSPT1P15170 499 aaKnown RBP3.65□□□□□ -1.82
RGPD6-201ENST00000329516 KDM6AO15550 1401 aaPredicted RBP3.65□□□□□ -1.83
RGPD6-201ENST00000329516 CFAP46Q8IYW2 2715 aa3.65□□□□□ -1.83
RGPD6-201ENST00000329516 AMIGO3Q86WK7 504 aa3.65□□□□□ -1.83
RGPD6-201ENST00000329516 MXRA5Q9NR99 2828 aa3.65□□□□□ -1.83
RGPD6-201ENST00000329516 RGPD3A6NKT7 1758 aaPredicted RBP3.64□□□□□ -1.83
RGPD6-201ENST00000329516 RGPD4Q7Z3J3 1758 aa3.64□□□□□ -1.83
RGPD6-201ENST00000329516 EIF3AQ14152 1382 aaKnown RBP3.64□□□□□ -1.83
RGPD6-201ENST00000329516 LTKP29376 864 aa3.64□□□□□ -1.83
RGPD6-201ENST00000329516 EXOC6Q8TAG9 804 aa3.64□□□□□ -1.83
RGPD6-201ENST00000329516 FNDC1Q4ZHG4 1894 aaPredicted RBP3.64□□□□□ -1.83
RGPD6-201ENST00000329516 TULP1O00294 542 aaPredicted RBP3.64□□□□□ -1.83
RGPD6-201ENST00000329516 ADAMTS3O15072 1205 aa3.64□□□□□ -1.83
RGPD6-201ENST00000329516 TSPYL6Q8N831 410 aa3.64□□□□□ -1.83
RGPD6-201ENST00000329516 ARID4BQ4LE39 1312 aaPredicted RBP3.64□□□□□ -1.83
RGPD6-201ENST00000329516 MYH3P11055 1940 aa3.64□□□□□ -1.83
RGPD6-201ENST00000329516 PDIA6Q15084 440 aa3.64□□□□□ -1.83
RGPD6-201ENST00000329516 ZC3H4Q9UPT8 1303 aaKnown RBP3.64□□□□□ -1.83
RGPD6-201ENST00000329516 NSD2O96028 1365 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 MAP1AP78559 2803 aaPredicted RBP3.63□□□□□ -1.83
RGPD6-201ENST00000329516 BCAR3O75815 825 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 QSER1Q2KHR3 1735 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 FYB1O15117 783 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 IL16Q14005 1332 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 ARHGEF10O15013 1369 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 SPATA31A3Q5VYP0 1347 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 UBR3Q6ZT12 1888 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 PXDNLA1KZ92 1463 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 TNS2Q63HR2 1409 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 PLIN1O60240 522 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 MEGF6O75095 1541 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 ZBTB48P10074 688 aaPredicted RBP3.63□□□□□ -1.83
RGPD6-201ENST00000329516 INHBEP58166 350 aa3.63□□□□□ -1.83
RGPD6-201ENST00000329516 ZMYM3Q14202 1370 aa3.62□□□□□ -1.83
RGPD6-201ENST00000329516 PPP2R1AP30153 589 aa3.62□□□□□ -1.83
RGPD6-201ENST00000329516 MTUS2Q5JR59 1369 aa3.62□□□□□ -1.83
RGPD6-201ENST00000329516 ARID2Q68CP9 1835 aa3.62□□□□□ -1.83
RGPD6-201ENST00000329516 PKD2Q13563 968 aa3.62□□□□□ -1.83
RGPD6-201ENST00000329516 SNRKQ9NRH2 765 aa3.62□□□□□ -1.83
RGPD6-201ENST00000329516 BRWD3Q6RI45 1802 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms