RNA–Protein interactions for RNA: ENST00000307635.3

ZNF556-201, Transcript of zinc finger protein 556, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF556, Length 6,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556-201ENST00000307635 C6orf229H3BNL8 230 aa12.74□□□□□ -0.37
ZNF556-201ENST00000307635 HYPKQ9NX55 129 aa12.74□□□□□ -0.37
ZNF556-201ENST00000307635 CT47B1P0C2W7 299 aaPredicted RBP12.74□□□□□ -0.37
ZNF556-201ENST00000307635 PCDH11XQ9BZA7 1347 aa12.74□□□□□ -0.37
ZNF556-201ENST00000307635 PCDH11YQ9BZA8 1340 aa12.74□□□□□ -0.37
ZNF556-201ENST00000307635 MPHOSPH10O00566 681 aaKnown RBP12.74□□□□□ -0.37
ZNF556-201ENST00000307635 TMEM132AQ24JP5 1023 aa12.74□□□□□ -0.37
ZNF556-201ENST00000307635 SYAP1Q96A49 352 aaPredicted RBP12.74□□□□□ -0.37
ZNF556-201ENST00000307635 EIF2AK4Q9P2K8 1649 aaKnown RBP12.73□□□□□ -0.37
ZNF556-201ENST00000307635 MAST1Q9Y2H9 1570 aa12.73□□□□□ -0.37
ZNF556-201ENST00000307635 YEATS2Q9ULM3 1422 aa12.73□□□□□ -0.37
ZNF556-201ENST00000307635 ZCCHC11Q5TAX3 1644 aaKnown RBP12.73□□□□□ -0.37
ZNF556-201ENST00000307635 APBA3O96018 575 aa12.73□□□□□ -0.37
ZNF556-201ENST00000307635 METTL24Q5JXM2 366 aa12.73□□□□□ -0.37
ZNF556-201ENST00000307635 CRACR2BQ8N4Y2 399 aaPredicted RBP12.73□□□□□ -0.37
ZNF556-201ENST00000307635 COG6Q9Y2V7 657 aa12.73□□□□□ -0.37
ZNF556-201ENST00000307635 NOL8Q76FK4 1167 aaKnown RBP12.72□□□□□ -0.37
ZNF556-201ENST00000307635 CABLES1Q8TDN4 633 aa12.72□□□□□ -0.37
ZNF556-201ENST00000307635 ANKRD36BQ8N2N9 1353 aa12.72□□□□□ -0.37
ZNF556-201ENST00000307635 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
ZNF556-201ENST00000307635 GBP4Q96PP9 640 aa12.72□□□□□ -0.37
ZNF556-201ENST00000307635 ANKRD18BA2A2Z9 1011 aa12.72□□□□□ -0.37
ZNF556-201ENST00000307635 SLC5A1P13866 664 aa12.72□□□□□ -0.37
ZNF556-201ENST00000307635 MTMR7Q9Y216 660 aa12.72□□□□□ -0.37
ZNF556-201ENST00000307635 ABCC1P33527 1531 aa12.72□□□□□ -0.37
ZNF556-201ENST00000307635 DRC7Q8IY82 874 aa12.72□□□□□ -0.37
ZNF556-201ENST00000307635 JDP2Q8WYK2 163 aa12.71□□□□□ -0.37
ZNF556-201ENST00000307635 LRP2BPQ9P2M1 347 aa12.71□□□□□ -0.37
ZNF556-201ENST00000307635 CENPQQ7L2Z9 268 aaPredicted RBP12.71□□□□□ -0.37
ZNF556-201ENST00000307635 TMEM2Q9UHN6 1383 aa12.71□□□□□ -0.37
ZNF556-201ENST00000307635 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.38
ZNF556-201ENST00000307635 SNRPA1P09661 255 aaKnown RBP12.71□□□□□ -0.38
ZNF556-201ENST00000307635 TPD52L1Q16890 204 aaPredicted RBP12.71□□□□□ -0.38
ZNF556-201ENST00000307635 ATF7IPQ6VMQ6 1270 aa12.71□□□□□ -0.38
ZNF556-201ENST00000307635 QTRT2Q9H974 415 aaKnown RBP12.71□□□□□ -0.38
ZNF556-201ENST00000307635 MYD88Q99836 296 aa12.7□□□□□ -0.38
ZNF556-201ENST00000307635 CFAP43Q8NDM7 1665 aa12.7□□□□□ -0.38
ZNF556-201ENST00000307635 TRAPPC3LQ5T215 181 aa12.7□□□□□ -0.38
ZNF556-201ENST00000307635 DZIP1Q86YF9 867 aaKnown RBP12.7□□□□□ -0.38
ZNF556-201ENST00000307635 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
ZNF556-201ENST00000307635 PTPRKQ15262 1439 aa12.7□□□□□ -0.38
ZNF556-201ENST00000307635 EXOSC9Q06265 439 aaKnown RBP12.7□□□□□ -0.38
ZNF556-201ENST00000307635 IFIT5Q13325 482 aaKnown RBP12.7□□□□□ -0.38
ZNF556-201ENST00000307635 KDM5DQ9BY66 1539 aa12.7□□□□□ -0.38
ZNF556-201ENST00000307635 FAM98CQ17RN3 349 aaKnown RBP12.7□□□□□ -0.38
ZNF556-201ENST00000307635 BEGAINQ9BUH8 593 aa12.7□□□□□ -0.38
ZNF556-201ENST00000307635 ZBED9Q6R2W3 1325 aa12.69□□□□□ -0.38
ZNF556-201ENST00000307635 NPATQ14207 1427 aa12.69□□□□□ -0.38
ZNF556-201ENST00000307635 NBR1Q14596 966 aa12.69□□□□□ -0.38
ZNF556-201ENST00000307635 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
ZNF556-201ENST00000307635 FLAD1Q8NFF5 587 aa12.69□□□□□ -0.38
ZNF556-201ENST00000307635 PSMA5P28066 241 aa12.69□□□□□ -0.38
ZNF556-201ENST00000307635 CCDC87Q9NVE4 849 aa12.69□□□□□ -0.38
ZNF556-201ENST00000307635 CCNL1Q9UK58 526 aaPredicted RBP12.69□□□□□ -0.38
ZNF556-201ENST00000307635 CCDC152Q4G0S7 254 aa12.68□□□□□ -0.38
ZNF556-201ENST00000307635 NLRP1Q9C000 1473 aa12.68□□□□□ -0.38
ZNF556-201ENST00000307635 MCTP1Q6DN14 999 aa12.68□□□□□ -0.38
ZNF556-201ENST00000307635 ZNF428Q96B54 188 aa12.68□□□□□ -0.38
ZNF556-201ENST00000307635 ATP6V1DQ9Y5K8 247 aa12.68□□□□□ -0.38
ZNF556-201ENST00000307635 EMILIN1Q9Y6C2 1016 aa12.68□□□□□ -0.38
ZNF556-201ENST00000307635 USP5P45974 858 aa12.68□□□□□ -0.38
ZNF556-201ENST00000307635 SIL1Q9H173 461 aa12.68□□□□□ -0.38
ZNF556-201ENST00000307635 HOOK1Q9UJC3 728 aaKnown RBP12.68□□□□□ -0.38
ZNF556-201ENST00000307635 IFT57Q9NWB7 429 aa12.68□□□□□ -0.38
ZNF556-201ENST00000307635 UGGT1Q9NYU2 1555 aa12.68□□□□□ -0.38
ZNF556-201ENST00000307635 HECW2Q9P2P5 1572 aa12.67□□□□□ -0.38
ZNF556-201ENST00000307635 GPR162Q16538 588 aa12.67□□□□□ -0.38
ZNF556-201ENST00000307635 TCOF1Q13428 1488 aaKnown RBP12.67□□□□□ -0.38
ZNF556-201ENST00000307635 RRP12Q5JTH9 1297 aaKnown RBP12.67□□□□□ -0.38
ZNF556-201ENST00000307635 ABCC11Q96J66 1382 aa12.67□□□□□ -0.38
ZNF556-201ENST00000307635 DUSP27Q5VZP5 1158 aa12.67□□□□□ -0.38
ZNF556-201ENST00000307635 SPTY2D1Q68D10 685 aaPredicted RBP12.67□□□□□ -0.38
ZNF556-201ENST00000307635 CREBRFQ8IUR6 639 aa12.67□□□□□ -0.38
ZNF556-201ENST00000307635 YTHDC2Q9H6S0 1430 aaKnown RBP12.67□□□□□ -0.38
ZNF556-201ENST00000307635 SPRYD3Q8NCJ5 442 aa12.67□□□□□ -0.38
ZNF556-201ENST00000307635 EYA3Q99504 573 aa12.67□□□□□ -0.38
ZNF556-201ENST00000307635 DBF4Q9UBU7 674 aaPredicted RBP12.67□□□□□ -0.38
ZNF556-201ENST00000307635 RRP1P56182 461 aaKnown RBP12.66□□□□□ -0.38
ZNF556-201ENST00000307635 GCP02774 474 aa12.66□□□□□ -0.38
ZNF556-201ENST00000307635 POLR3DP05423 398 aaPredicted RBP12.66□□□□□ -0.38
ZNF556-201ENST00000307635 LDHCP07864 332 aa12.66□□□□□ -0.38
ZNF556-201ENST00000307635 SAMD9Q5K651 1589 aa12.66□□□□□ -0.38
ZNF556-201ENST00000307635 RBM17Q96I25 401 aaKnown RBP12.66□□□□□ -0.38
ZNF556-201ENST00000307635 MPHOSPH6Q99547 160 aaKnown RBP12.66□□□□□ -0.38
ZNF556-201ENST00000307635 CWC25Q9NXE8 425 aaPredicted RBP12.66□□□□□ -0.38
ZNF556-201ENST00000307635 AKAP4Q5JQC9 854 aa12.66□□□□□ -0.38
ZNF556-201ENST00000307635 MCM10Q7L590 875 aa12.66□□□□□ -0.38
ZNF556-201ENST00000307635 OGFOD1Q8N543 542 aa12.66□□□□□ -0.38
ZNF556-201ENST00000307635 ABCA8O94911 1581 aa12.66□□□□□ -0.38
ZNF556-201ENST00000307635 NLRP3Q96P20 1036 aa12.66□□□□□ -0.38
ZNF556-201ENST00000307635 GRM1Q13255 1194 aa12.65□□□□□ -0.38
ZNF556-201ENST00000307635 TPTE2Q6XPS3 522 aa12.65□□□□□ -0.38
ZNF556-201ENST00000307635 GPTP24298 496 aa12.65□□□□□ -0.38
ZNF556-201ENST00000307635 GSTO1P78417 241 aa12.65□□□□□ -0.38
ZNF556-201ENST00000307635 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.65□□□□□ -0.39
ZNF556-201ENST00000307635 TDO2P48775 406 aa12.65□□□□□ -0.39
ZNF556-201ENST00000307635 SOGA3Q5TF21 947 aa12.65□□□□□ -0.39
ZNF556-201ENST00000307635 CCDC85AQ96PX6 553 aaPredicted RBP12.65□□□□□ -0.39
ZNF556-201ENST00000307635 FKBP4Q02790 459 aaKnown RBP eCLIP12.64□□□□□ -0.39
ZNF556-201ENST00000307635 DNTTIP2Q5QJE6 756 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms