RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 RBM33Q96EV2 1170 aaKnown RBP24.84■■□□□ 1.57
NFIL3-201ENST00000297689 SOX12O15370 315 aa24.84■■□□□ 1.57
NFIL3-201ENST00000297689 RGS12O14924 1447 aa24.83■■□□□ 1.57
NFIL3-201ENST00000297689 CRB1P82279 1406 aa24.83■■□□□ 1.57
NFIL3-201ENST00000297689 MAP3K19Q56UN5 1328 aa24.83■■□□□ 1.57
NFIL3-201ENST00000297689 INTS3Q68E01 1043 aaKnown RBP24.82■■□□□ 1.56
NFIL3-201ENST00000297689 C1orf115Q9H7X2 142 aa24.82■■□□□ 1.56
NFIL3-201ENST00000297689 ARHGEF10O15013 1369 aa24.82■■□□□ 1.56
NFIL3-201ENST00000297689 MFAP1P55081 439 aaKnown RBP24.82■■□□□ 1.56
NFIL3-201ENST00000297689 USP54Q70EL1 1684 aa24.81■■□□□ 1.56
NFIL3-201ENST00000297689 RBM25P49756 843 aaKnown RBP24.81■■□□□ 1.56
NFIL3-201ENST00000297689 KDRP35968 1356 aa24.8■■□□□ 1.56
NFIL3-201ENST00000297689 HSPA2P54652 639 aa24.8■■□□□ 1.56
NFIL3-201ENST00000297689 HAP1P54257 671 aaPredicted RBP24.79■■□□□ 1.56
NFIL3-201ENST00000297689 ANKRD45Q5TZF3 282 aa24.79■■□□□ 1.56
NFIL3-201ENST00000297689 LMTK3Q96Q04 1460 aa24.79■■□□□ 1.56
NFIL3-201ENST00000297689 SLKQ9H2G2 1235 aaPredicted RBP24.79■■□□□ 1.56
NFIL3-201ENST00000297689 SBNO1A3KN83 1393 aa24.78■■□□□ 1.56
NFIL3-201ENST00000297689 KRT24Q2M2I5 525 aa24.77■■□□□ 1.56
NFIL3-201ENST00000297689 MCM10Q7L590 875 aa24.77■■□□□ 1.56
NFIL3-201ENST00000297689 ADGRL3Q9HAR2 1447 aa24.77■■□□□ 1.56
NFIL3-201ENST00000297689 FLT4P35916 1363 aa24.76■■□□□ 1.55
NFIL3-201ENST00000297689 NLRP6P59044 892 aa24.76■■□□□ 1.55
NFIL3-201ENST00000297689 PHF8Q9UPP1 1060 aa24.75■■□□□ 1.55
NFIL3-201ENST00000297689 NUTM2GQ5VZR2 741 aa24.74■■□□□ 1.55
NFIL3-201ENST00000297689 AEBP2Q6ZN18 517 aaPredicted RBP24.74■■□□□ 1.55
NFIL3-201ENST00000297689 ATP10DQ9P241 1426 aa24.74■■□□□ 1.55
NFIL3-201ENST00000297689 DCTPP1Q9H773 170 aa24.74■■□□□ 1.55
NFIL3-201ENST00000297689 IGSF1Q8N6C5 1336 aa24.73■■□□□ 1.55
NFIL3-201ENST00000297689 PTPRCP08575 1304 aa24.73■■□□□ 1.55
NFIL3-201ENST00000297689 NWD1Q149M9 1564 aa24.73■■□□□ 1.55
NFIL3-201ENST00000297689 MTHFSDQ2M296 383 aaKnown RBP24.72■■□□□ 1.55
NFIL3-201ENST00000297689 ANKRD44Q8N8A2 993 aa24.71■■□□□ 1.55
NFIL3-201ENST00000297689 SNX21Q969T3 373 aa24.71■■□□□ 1.55
NFIL3-201ENST00000297689 NCOA3Q9Y6Q9 1424 aa24.71■■□□□ 1.55
NFIL3-201ENST00000297689 ABTB2Q8N961 1025 aa24.7■■□□□ 1.54
NFIL3-201ENST00000297689 AMPHP49418 695 aa24.7■■□□□ 1.54
NFIL3-201ENST00000297689 EYA1Q99502 592 aa24.7■■□□□ 1.54
NFIL3-201ENST00000297689 FOXO3O43524 673 aa24.69■■□□□ 1.54
NFIL3-201ENST00000297689 KIF2CQ99661 725 aa24.69■■□□□ 1.54
NFIL3-201ENST00000297689 RPAP2Q8IXW5 612 aaPredicted RBP24.68■■□□□ 1.54
NFIL3-201ENST00000297689 STRCQ7RTU9 1775 aa24.67■■□□□ 1.54
NFIL3-201ENST00000297689 RTL1A6NKG5 1358 aa24.67■■□□□ 1.54
NFIL3-201ENST00000297689 DDIT3P35638 169 aa24.67■■□□□ 1.54
NFIL3-201ENST00000297689 TBC1D9Q6ZT07 1266 aa24.67■■□□□ 1.54
NFIL3-201ENST00000297689 PLEKHM2Q8IWE5 1019 aa24.66■■□□□ 1.54
NFIL3-201ENST00000297689 LRRC37A3O60309 1634 aa24.66■■□□□ 1.54
NFIL3-201ENST00000297689 HOXC9P31274 260 aa24.66■■□□□ 1.54
NFIL3-201ENST00000297689 ESCO1Q5FWF5 840 aa24.65■■□□□ 1.54
NFIL3-201ENST00000297689 CEP85Q6P2H3 762 aa24.65■■□□□ 1.54
NFIL3-201ENST00000297689 HTATSF1O43719 755 aaKnown RBP24.65■■□□□ 1.54
NFIL3-201ENST00000297689 CHMP5Q9NZZ3 219 aa24.65■■□□□ 1.54
NFIL3-201ENST00000297689 MSH6P52701 1360 aa24.64■■□□□ 1.54
NFIL3-201ENST00000297689 GSPT1P15170 499 aaKnown RBP24.64■■□□□ 1.53
NFIL3-201ENST00000297689 GAS2L2Q8NHY3 880 aa24.63■■□□□ 1.53
NFIL3-201ENST00000297689 LTN1O94822 1766 aa24.62■■□□□ 1.53
NFIL3-201ENST00000297689 SLC4A2P04920 1241 aa24.62■■□□□ 1.53
NFIL3-201ENST00000297689 HSCBQ8IWL3 235 aa24.62■■□□□ 1.53
NFIL3-201ENST00000297689 MIS18AQ9NYP9 233 aa24.62■■□□□ 1.53
NFIL3-201ENST00000297689 NFAT5O94916 1531 aa24.62■■□□□ 1.53
NFIL3-201ENST00000297689 C14orf37Q86TY3 774 aa24.62■■□□□ 1.53
NFIL3-201ENST00000297689 STRCP1A6NGW2 1772 aa24.61■■□□□ 1.53
NFIL3-201ENST00000297689 RTF1Q92541 710 aaKnown RBP24.61■■□□□ 1.53
NFIL3-201ENST00000297689 ORAI2Q96SN7 254 aa24.61■■□□□ 1.53
NFIL3-201ENST00000297689 MEIS3Q99687 375 aa24.61■■□□□ 1.53
NFIL3-201ENST00000297689 TSPYL4Q9UJ04 414 aa24.61■■□□□ 1.53
NFIL3-201ENST00000297689 CDC45O75419 566 aa24.6■■□□□ 1.53
NFIL3-201ENST00000297689 PSME1Q06323 249 aa24.6■■□□□ 1.53
NFIL3-201ENST00000297689 SPRYD3Q8NCJ5 442 aa24.6■■□□□ 1.53
NFIL3-201ENST00000297689 MCM4P33991 863 aa24.58■■□□□ 1.53
NFIL3-201ENST00000297689 TTC22Q5TAA0 569 aa24.58■■□□□ 1.53
NFIL3-201ENST00000297689 G2E3Q7L622 706 aa24.58■■□□□ 1.53
NFIL3-201ENST00000297689 IL27Q8NEV9 243 aa24.58■■□□□ 1.53
NFIL3-201ENST00000297689 PROSER2Q86WR7 435 aaPredicted RBP24.57■■□□□ 1.52
NFIL3-201ENST00000297689 C16orf71Q8IYS4 520 aaPredicted RBP24.57■■□□□ 1.52
NFIL3-201ENST00000297689 CCT4P50991 539 aaKnown RBP24.54■■□□□ 1.52
NFIL3-201ENST00000297689 LTV1Q96GA3 475 aaPredicted RBP24.54■■□□□ 1.52
NFIL3-201ENST00000297689 TRPM3Q9HCF6 1732 aaPredicted RBP24.54■■□□□ 1.52
NFIL3-201ENST00000297689 GNAT3A8MTJ3 354 aa24.54■■□□□ 1.52
NFIL3-201ENST00000297689 BABAM1Q9NWV8 329 aa24.54■■□□□ 1.52
NFIL3-201ENST00000297689 SOS1Q07889 1333 aaPredicted RBP24.53■■□□□ 1.52
NFIL3-201ENST00000297689 OTUD7AQ8TE49 926 aaPredicted RBP24.53■■□□□ 1.52
NFIL3-201ENST00000297689 BRPF3Q9ULD4 1205 aa24.53■■□□□ 1.52
NFIL3-201ENST00000297689 EIF5BO60841 1220 aaKnown RBP24.52■■□□□ 1.52
NFIL3-201ENST00000297689 CD2BP2O95400 341 aaKnown RBP24.52■■□□□ 1.52
NFIL3-201ENST00000297689 XPCQ01831 940 aaPredicted RBP24.52■■□□□ 1.52
NFIL3-201ENST00000297689 IL17REQ8NFR9 667 aa24.52■■□□□ 1.52
NFIL3-201ENST00000297689 IP6K1Q92551 441 aa24.52■■□□□ 1.52
NFIL3-201ENST00000297689 FAM208AQ9UK61 1670 aaKnown RBP24.52■■□□□ 1.52
NFIL3-201ENST00000297689 CIZ1Q9ULV3 898 aaPredicted RBP24.52■■□□□ 1.52
NFIL3-201ENST00000297689 PHRF1Q9P1Y6 1649 aaKnown RBP24.52■■□□□ 1.52
NFIL3-201ENST00000297689 C1orf167Q5SNV9 1468 aa24.51■■□□□ 1.51
NFIL3-201ENST00000297689 F6X3S4 739 aa24.51■■□□□ 1.51
NFIL3-201ENST00000297689 CACNA1FO60840 1977 aa24.51■■□□□ 1.51
NFIL3-201ENST00000297689 MAP3K5Q99683 1374 aa24.5■■□□□ 1.51
NFIL3-201ENST00000297689 SLIT3O75094 1523 aa24.49■■□□□ 1.51
NFIL3-201ENST00000297689 OSBPL3Q9H4L5 887 aa24.49■■□□□ 1.51
NFIL3-201ENST00000297689 TMEM94Q12767 1356 aa24.48■■□□□ 1.51
NFIL3-201ENST00000297689 KIF1AQ12756 1690 aa24.48■■□□□ 1.51
NFIL3-201ENST00000297689 USHBP1Q8N6Y0 703 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms