RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 NECTIN2Q92692 538 aa12.29□□□□□ -0.44
HMGCR-201ENST00000287936 METP08581 1390 aa12.29□□□□□ -0.44
HMGCR-201ENST00000287936 MCM2P49736 904 aa12.29□□□□□ -0.44
HMGCR-201ENST00000287936 HSP90AB2PQ58FF8 381 aa12.29□□□□□ -0.44
HMGCR-201ENST00000287936 SYAP1Q96A49 352 aaPredicted RBP12.29□□□□□ -0.44
HMGCR-201ENST00000287936 C1orf141Q5JVX7 400 aa12.29□□□□□ -0.44
HMGCR-201ENST00000287936 LRRCC1Q9C099 1032 aa12.29□□□□□ -0.44
HMGCR-201ENST00000287936 ADGRB2O60241 1585 aa12.29□□□□□ -0.44
HMGCR-201ENST00000287936 AGLP35573 1532 aa12.29□□□□□ -0.44
HMGCR-201ENST00000287936 FLT4P35916 1363 aa12.28□□□□□ -0.44
HMGCR-201ENST00000287936 TMEM131LA2VDJ0 1609 aa12.28□□□□□ -0.44
HMGCR-201ENST00000287936 NCKAP5LQ9HCH0 1330 aa12.28□□□□□ -0.44
HMGCR-201ENST00000287936 PLEKHG3A1L390 1219 aa12.28□□□□□ -0.44
HMGCR-201ENST00000287936 SRCIN1Q9C0H9 1055 aa12.28□□□□□ -0.44
HMGCR-201ENST00000287936 LRRC7Q96NW7 1537 aa12.28□□□□□ -0.44
HMGCR-201ENST00000287936 ZNF853P0CG23 659 aa12.28□□□□□ -0.44
HMGCR-201ENST00000287936 PIK3R4Q99570 1358 aa12.28□□□□□ -0.44
HMGCR-201ENST00000287936 HTATSF1O43719 755 aaKnown RBP12.28□□□□□ -0.44
HMGCR-201ENST00000287936 KCNJ4P48050 445 aa12.28□□□□□ -0.44
HMGCR-201ENST00000287936 NUTM2GQ5VZR2 741 aa12.28□□□□□ -0.44
HMGCR-201ENST00000287936 EIF2S2P20042 333 aaKnown RBP12.27□□□□□ -0.44
HMGCR-201ENST00000287936 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.44
HMGCR-201ENST00000287936 PSME1Q06323 249 aa12.27□□□□□ -0.44
HMGCR-201ENST00000287936 ANO2Q9NQ90 1003 aa12.27□□□□□ -0.44
HMGCR-201ENST00000287936 PTCH1Q13635 1447 aa12.27□□□□□ -0.44
HMGCR-201ENST00000287936 KIAA0232Q92628 1395 aa12.27□□□□□ -0.44
HMGCR-201ENST00000287936 CHL1O00533 1208 aa12.27□□□□□ -0.45
HMGCR-201ENST00000287936 COL3A1P02461 1466 aaPredicted RBP12.27□□□□□ -0.45
HMGCR-201ENST00000287936 HDGFL1Q5TGJ6 251 aa12.27□□□□□ -0.45
HMGCR-201ENST00000287936 MIS18AQ9NYP9 233 aa12.26□□□□□ -0.45
HMGCR-201ENST00000287936 MSNP26038 577 aaKnown RBP12.26□□□□□ -0.45
HMGCR-201ENST00000287936 TNPO1Q92973 898 aaKnown RBP12.25□□□□□ -0.45
HMGCR-201ENST00000287936 PTMAP06454 111 aaKnown RBP12.25□□□□□ -0.45
HMGCR-201ENST00000287936 TAF7Q15545 349 aaPredicted RBP12.25□□□□□ -0.45
HMGCR-201ENST00000287936 MCTP1Q6DN14 999 aa12.25□□□□□ -0.45
HMGCR-201ENST00000287936 CEP85Q6P2H3 762 aa12.25□□□□□ -0.45
HMGCR-201ENST00000287936 RUFY2Q8WXA3 655 aa12.25□□□□□ -0.45
HMGCR-201ENST00000287936 ARHGEF10O15013 1369 aa12.25□□□□□ -0.45
HMGCR-201ENST00000287936 PLEKHO1Q53GL0 409 aaPredicted RBP12.25□□□□□ -0.45
HMGCR-201ENST00000287936 PLEKHM2Q8IWE5 1019 aa12.25□□□□□ -0.45
HMGCR-201ENST00000287936 TBX22Q9Y458 520 aa12.25□□□□□ -0.45
HMGCR-201ENST00000287936 SBNO1A3KN83 1393 aa12.24□□□□□ -0.45
HMGCR-201ENST00000287936 SMARCA5O60264 1052 aaPredicted RBP12.24□□□□□ -0.45
HMGCR-201ENST00000287936 GRPEL1Q9HAV7 217 aa12.24□□□□□ -0.45
HMGCR-201ENST00000287936 SOS1Q07889 1333 aaPredicted RBP12.24□□□□□ -0.45
HMGCR-201ENST00000287936 CPSF1Q10570 1443 aaKnown RBP12.24□□□□□ -0.45
HMGCR-201ENST00000287936 MEIS3Q99687 375 aa12.24□□□□□ -0.45
HMGCR-201ENST00000287936 RICTORQ6R327 1708 aa12.24□□□□□ -0.45
HMGCR-201ENST00000287936 TSPOAP1O95153 1857 aa12.24□□□□□ -0.45
HMGCR-201ENST00000287936 FLIIQ13045 1269 aa12.23□□□□□ -0.45
HMGCR-201ENST00000287936 CEBPAP49715 358 aaPredicted RBP12.23□□□□□ -0.45
HMGCR-201ENST00000287936 NEK4P51957 841 aa12.23□□□□□ -0.45
HMGCR-201ENST00000287936 MTHFSDQ2M296 383 aaKnown RBP12.23□□□□□ -0.45
HMGCR-201ENST00000287936 NOL8Q76FK4 1167 aaKnown RBP12.23□□□□□ -0.45
HMGCR-201ENST00000287936 C9orf78Q9NZ63 289 aaPredicted RBP12.23□□□□□ -0.45
HMGCR-201ENST00000287936 MAP3K19Q56UN5 1328 aa12.23□□□□□ -0.45
HMGCR-201ENST00000287936 PLEKHG1Q9ULL1 1385 aa12.23□□□□□ -0.45
HMGCR-201ENST00000287936 F6X3S4 739 aa12.23□□□□□ -0.45
HMGCR-201ENST00000287936 SURF6O75683 361 aaKnown RBP12.23□□□□□ -0.45
HMGCR-201ENST00000287936 ANTXR1Q9H6X2 564 aa12.23□□□□□ -0.45
HMGCR-201ENST00000287936 CLTCQ00610 1675 aaKnown RBP12.23□□□□□ -0.45
HMGCR-201ENST00000287936 PHF14O94880 888 aa12.23□□□□□ -0.45
HMGCR-201ENST00000287936 DDX58O95786 925 aaKnown RBP12.23□□□□□ -0.45
HMGCR-201ENST00000287936 CD163L1Q9NR16 1453 aa12.23□□□□□ -0.45
HMGCR-201ENST00000287936 MX1P20591 662 aa12.22□□□□□ -0.45
HMGCR-201ENST00000287936 DIAPH3Q9NSV4 1193 aa12.22□□□□□ -0.45
HMGCR-201ENST00000287936 SIGLEC1Q9BZZ2 1709 aa12.22□□□□□ -0.45
HMGCR-201ENST00000287936 MSH6P52701 1360 aa12.22□□□□□ -0.45
HMGCR-201ENST00000287936 EXOC6BQ9Y2D4 811 aa12.22□□□□□ -0.45
HMGCR-201ENST00000287936 CSPP1Q1MSJ5 1256 aa12.22□□□□□ -0.45
HMGCR-201ENST00000287936 CNTROBQ8N137 903 aa12.22□□□□□ -0.45
HMGCR-201ENST00000287936 KIF20BQ96Q89 1820 aa12.22□□□□□ -0.45
HMGCR-201ENST00000287936 SDSP20132 328 aa12.21□□□□□ -0.45
HMGCR-201ENST00000287936 KRT24Q2M2I5 525 aa12.21□□□□□ -0.45
HMGCR-201ENST00000287936 KCNH5Q8NCM2 988 aa12.21□□□□□ -0.45
HMGCR-201ENST00000287936 RAB11FIP3O75154 756 aa12.21□□□□□ -0.45
HMGCR-201ENST00000287936 RAB3GAP1Q15042 981 aa12.21□□□□□ -0.45
HMGCR-201ENST00000287936 GLIPR1L2Q4G1C9 344 aa12.21□□□□□ -0.45
HMGCR-201ENST00000287936 CDC42BPGQ6DT37 1551 aa12.21□□□□□ -0.46
HMGCR-201ENST00000287936 PRR36Q9H6K5 1346 aa12.21□□□□□ -0.46
HMGCR-201ENST00000287936 ANKLE2Q86XL3 938 aa12.21□□□□□ -0.46
HMGCR-201ENST00000287936 SPATA31D1Q6ZQQ2 1576 aa12.21□□□□□ -0.46
HMGCR-201ENST00000287936 PHF8Q9UPP1 1060 aa12.2□□□□□ -0.46
HMGCR-201ENST00000287936 ROBO2Q9HCK4 1378 aa12.2□□□□□ -0.46
HMGCR-201ENST00000287936 IFIT2P09913 472 aaKnown RBP12.2□□□□□ -0.46
HMGCR-201ENST00000287936 BABAM1Q9NWV8 329 aa12.2□□□□□ -0.46
HMGCR-201ENST00000287936 ATP6V1DQ9Y5K8 247 aa12.2□□□□□ -0.46
HMGCR-201ENST00000287936 USP6P35125 1406 aa12.2□□□□□ -0.46
HMGCR-201ENST00000287936 MBD3O95983 291 aa12.2□□□□□ -0.46
HMGCR-201ENST00000287936 EYA1Q99502 592 aa12.2□□□□□ -0.46
HMGCR-201ENST00000287936 ESCO1Q5FWF5 840 aa12.2□□□□□ -0.46
HMGCR-201ENST00000287936 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
HMGCR-201ENST00000287936 ZNF530Q6P9A1 599 aaPredicted RBP12.2□□□□□ -0.46
HMGCR-201ENST00000287936 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
HMGCR-201ENST00000287936 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
HMGCR-201ENST00000287936 CSB-PGBD3P0DP91 1061 aa12.19□□□□□ -0.46
HMGCR-201ENST00000287936 SSFA2P28290 1259 aa12.19□□□□□ -0.46
HMGCR-201ENST00000287936 NASPP49321 788 aaPredicted RBP12.19□□□□□ -0.46
HMGCR-201ENST00000287936 NLRP1Q9C000 1473 aa12.19□□□□□ -0.46
HMGCR-201ENST00000287936 NEXNQ0ZGT2 675 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms