RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 SULT6B1Q6IMI4 303 aa17.15■□□□□ 0.34
SCARF1-201ENST00000263071 LTV1Q96GA3 475 aaPredicted RBP17.15■□□□□ 0.34
SCARF1-201ENST00000263071 EXOC6BQ9Y2D4 811 aa17.15■□□□□ 0.34
SCARF1-201ENST00000263071 HOMEZQ8IX15 550 aa17.14■□□□□ 0.33
SCARF1-201ENST00000263071 SLC52A1Q9NWF4 448 aa17.14■□□□□ 0.33
SCARF1-201ENST00000263071 ZCCHC11Q5TAX3 1644 aaKnown RBP17.14■□□□□ 0.33
SCARF1-201ENST00000263071 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.33
SCARF1-201ENST00000263071 ANKRD36BQ8N2N9 1353 aa17.14■□□□□ 0.33
SCARF1-201ENST00000263071 BMP2KLQ5H9B9 411 aa17.13■□□□□ 0.33
SCARF1-201ENST00000263071 NUTM2GQ5VZR2 741 aa17.13■□□□□ 0.33
SCARF1-201ENST00000263071 BAG4O95429 457 aaKnown RBP17.13■□□□□ 0.33
SCARF1-201ENST00000263071 GABPB1Q06547 395 aaPredicted RBP17.13■□□□□ 0.33
SCARF1-201ENST00000263071 CHAF1AQ13111 956 aaPredicted RBP17.13■□□□□ 0.33
SCARF1-201ENST00000263071 ABCC1P33527 1531 aa17.13■□□□□ 0.33
SCARF1-201ENST00000263071 NEK4P51957 841 aa17.12■□□□□ 0.33
SCARF1-201ENST00000263071 AXDND1Q5T1B0 1012 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-201ENST00000263071 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
SCARF1-201ENST00000263071 GSPT1P15170 499 aaKnown RBP17.12■□□□□ 0.33
SCARF1-201ENST00000263071 GNAI1P63096 354 aa17.12■□□□□ 0.33
SCARF1-201ENST00000263071 NFE2L2Q16236 605 aa17.12■□□□□ 0.33
SCARF1-201ENST00000263071 ZNF692Q9BU19 519 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-201ENST00000263071 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
SCARF1-201ENST00000263071 FEZ1Q99689 392 aa17.12■□□□□ 0.33
SCARF1-201ENST00000263071 UPF3BQ9BZI7 483 aaKnown RBP17.12■□□□□ 0.33
SCARF1-201ENST00000263071 TRPM2O94759 1503 aa17.11■□□□□ 0.33
SCARF1-201ENST00000263071 CASC1Q6TDU7 716 aa17.11■□□□□ 0.33
SCARF1-201ENST00000263071 MEIS3Q99687 375 aa17.11■□□□□ 0.33
SCARF1-201ENST00000263071 OGFRQ9NZT2 677 aa17.11■□□□□ 0.33
SCARF1-201ENST00000263071 FCHSD2O94868 740 aa17.11■□□□□ 0.33
SCARF1-201ENST00000263071 SLC4A2P04920 1241 aa17.11■□□□□ 0.33
SCARF1-201ENST00000263071 RBM25P49756 843 aaKnown RBP17.11■□□□□ 0.33
SCARF1-201ENST00000263071 RAB3GAP1Q15042 981 aa17.11■□□□□ 0.33
SCARF1-201ENST00000263071 ZNF622Q969S3 477 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCARF1-201ENST00000263071 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCARF1-201ENST00000263071 ANO2Q9NQ90 1003 aa17.11■□□□□ 0.33
SCARF1-201ENST00000263071 PLXNC1O60486 1568 aa17.1■□□□□ 0.33
SCARF1-201ENST00000263071 SYCE3A1L190 88 aa17.1■□□□□ 0.33
SCARF1-201ENST00000263071 GCC1Q96CN9 775 aa17.1■□□□□ 0.33
SCARF1-201ENST00000263071 COG3Q96JB2 828 aa17.1■□□□□ 0.33
SCARF1-201ENST00000263071 KIF2CQ99661 725 aa17.09■□□□□ 0.33
SCARF1-201ENST00000263071 TULP1O00294 542 aaPredicted RBP17.09■□□□□ 0.33
SCARF1-201ENST00000263071 MMP14P50281 582 aa17.09■□□□□ 0.33
SCARF1-201ENST00000263071 RBSNQ9H1K0 784 aa17.09■□□□□ 0.33
SCARF1-201ENST00000263071 LOC102724159A0A0B4J2E5 919 aa17.09■□□□□ 0.33
SCARF1-201ENST00000263071 NPATQ14207 1427 aa17.09■□□□□ 0.33
SCARF1-201ENST00000263071 PWP2Q15269 919 aaKnown RBP17.09■□□□□ 0.33
SCARF1-201ENST00000263071 KLHL40Q2TBA0 621 aa17.08■□□□□ 0.33
SCARF1-201ENST00000263071 DDX54Q8TDD1 881 aaKnown RBP17.08■□□□□ 0.33
SCARF1-201ENST00000263071 PDLIM2Q96JY6 352 aa17.08■□□□□ 0.33
SCARF1-201ENST00000263071 CHMP3Q9Y3E7 222 aa17.08■□□□□ 0.33
SCARF1-201ENST00000263071 SDSP20132 328 aa17.08■□□□□ 0.32
SCARF1-201ENST00000263071 PRIM1P49642 420 aaKnown RBP17.08■□□□□ 0.32
SCARF1-201ENST00000263071 PLEKHM2Q8IWE5 1019 aa17.08■□□□□ 0.32
SCARF1-201ENST00000263071 PPIP5K1Q6PFW1 1433 aa17.08■□□□□ 0.32
SCARF1-201ENST00000263071 FOXO3O43524 673 aa17.08■□□□□ 0.32
SCARF1-201ENST00000263071 CAPN2P17655 700 aa17.08■□□□□ 0.32
SCARF1-201ENST00000263071 CT47B1P0C2W7 299 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-201ENST00000263071 C17orf53Q8N3J3 647 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-201ENST00000263071 ATP7AQ04656 1500 aa17.07■□□□□ 0.32
SCARF1-201ENST00000263071 ZFYVE16Q7Z3T8 1539 aa17.07■□□□□ 0.32
SCARF1-201ENST00000263071 ST18O60284 1047 aa17.07■□□□□ 0.32
SCARF1-201ENST00000263071 IL1RAPL2Q9NP60 686 aa17.07■□□□□ 0.32
SCARF1-201ENST00000263071 GEMIN8Q9NWZ8 242 aaKnown RBP17.07■□□□□ 0.32
SCARF1-201ENST00000263071 CIZ1Q9ULV3 898 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-201ENST00000263071 API5Q9BZZ5 524 aaKnown RBP17.06■□□□□ 0.32
SCARF1-201ENST00000263071 ESF1Q9H501 851 aaKnown RBP17.06■□□□□ 0.32
SCARF1-201ENST00000263071 HSP90B1P14625 803 aaKnown RBP17.06■□□□□ 0.32
SCARF1-201ENST00000263071 ABCA6Q8N139 1617 aa17.05■□□□□ 0.32
SCARF1-201ENST00000263071 PSEN1P49768 467 aa17.05■□□□□ 0.32
SCARF1-201ENST00000263071 INTS3Q68E01 1043 aaKnown RBP17.05■□□□□ 0.32
SCARF1-201ENST00000263071 TAOK2Q9UL54 1235 aa17.05■□□□□ 0.32
SCARF1-201ENST00000263071 GTF2A1P52655 376 aaPredicted RBP17.05■□□□□ 0.32
SCARF1-201ENST00000263071 ALDH1L2Q3SY69 923 aa17.05■□□□□ 0.32
SCARF1-201ENST00000263071 IQGAP1P46940 1657 aa17.04■□□□□ 0.32
SCARF1-201ENST00000263071 GTF2F1P35269 517 aaKnown RBP eCLIP17.04■□□□□ 0.323e-7■■■■■ 35.7
SCARF1-201ENST00000263071 LMOD3Q0VAK6 560 aa17.04■□□□□ 0.32
SCARF1-201ENST00000263071 YY1AP1Q9H869 796 aa17.04■□□□□ 0.32
SCARF1-201ENST00000263071 DIAPH3Q9NSV4 1193 aa17.04■□□□□ 0.32
SCARF1-201ENST00000263071 NOLC1Q14978 699 aaKnown RBP eCLIP17.04■□□□□ 0.32
SCARF1-201ENST00000263071 ZSCAN23Q3MJ62 389 aa17.04■□□□□ 0.32
SCARF1-201ENST00000263071 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.04■□□□□ 0.32
SCARF1-201ENST00000263071 ABCC11Q96J66 1382 aa17.04■□□□□ 0.32
SCARF1-201ENST00000263071 SLFN14P0C7P3 912 aa17.03■□□□□ 0.32
SCARF1-201ENST00000263071 FKBP5Q13451 457 aaPredicted RBP17.03■□□□□ 0.32
SCARF1-201ENST00000263071 RTF1Q92541 710 aaKnown RBP17.03■□□□□ 0.32
SCARF1-201ENST00000263071 SNX21Q969T3 373 aa17.03■□□□□ 0.32
SCARF1-201ENST00000263071 MYOM1P52179 1685 aa17.03■□□□□ 0.32
SCARF1-201ENST00000263071 G2E3Q7L622 706 aa17.03■□□□□ 0.32
SCARF1-201ENST00000263071 NSFL1CQ9UNZ2 370 aaKnown RBP17.03■□□□□ 0.32
SCARF1-201ENST00000263071 ASXL2Q76L83 1435 aa17.03■□□□□ 0.32
SCARF1-201ENST00000263071 ZNF445P59923 1031 aa17.02■□□□□ 0.32
SCARF1-201ENST00000263071 HSP90AB2PQ58FF8 381 aa17.02■□□□□ 0.32
SCARF1-201ENST00000263071 BANK1Q8NDB2 785 aa17.02■□□□□ 0.32
SCARF1-201ENST00000263071 CLASP1Q7Z460 1538 aa17.02■□□□□ 0.32
SCARF1-201ENST00000263071 TTC22Q5TAA0 569 aa17.02■□□□□ 0.32
SCARF1-201ENST00000263071 CYB5RLQ6IPT4 315 aa17.02■□□□□ 0.32
SCARF1-201ENST00000263071 TMX1Q9H3N1 280 aa17.02■□□□□ 0.32
SCARF1-201ENST00000263071 EFCC1Q9HA90 598 aa17.02■□□□□ 0.32
SCARF1-201ENST00000263071 EIF2S2P20042 333 aaKnown RBP17.02■□□□□ 0.31
SCARF1-201ENST00000263071 RABEP1Q15276 862 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms