RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
TUBGCP3-201ENST00000261965 SPC24Q8NBT2 197 aa17.09■□□□□ 0.33
TUBGCP3-201ENST00000261965 MCCP23508 829 aa17.09■□□□□ 0.33
TUBGCP3-201ENST00000261965 CLCN1P35523 988 aa17.09■□□□□ 0.33
TUBGCP3-201ENST00000261965 FOSBP53539 338 aa17.09■□□□□ 0.33
TUBGCP3-201ENST00000261965 INTS3Q68E01 1043 aaKnown RBP17.09■□□□□ 0.33
TUBGCP3-201ENST00000261965 ZNF592Q92610 1267 aa17.09■□□□□ 0.33
TUBGCP3-201ENST00000261965 SNX21Q969T3 373 aa17.08■□□□□ 0.33
TUBGCP3-201ENST00000261965 CCDC61Q9Y6R9 512 aa17.08■□□□□ 0.33
TUBGCP3-201ENST00000261965 VWDEQ8N2E2 1590 aa17.08■□□□□ 0.33
TUBGCP3-201ENST00000261965 FKBP5Q13451 457 aaPredicted RBP17.08■□□□□ 0.32
TUBGCP3-201ENST00000261965 ZHX1Q9UKY1 873 aaPredicted RBP17.08■□□□□ 0.32
TUBGCP3-201ENST00000261965 NRXN1Q9ULB1 1477 aa17.08■□□□□ 0.32
TUBGCP3-201ENST00000261965 ERBB4Q15303 1308 aa17.08■□□□□ 0.32
TUBGCP3-201ENST00000261965 TTC22Q5TAA0 569 aa17.07■□□□□ 0.32
TUBGCP3-201ENST00000261965 DEPDC5O75140 1603 aa17.07■□□□□ 0.32
TUBGCP3-201ENST00000261965 EIF4A2Q14240 407 aaKnown RBP17.07■□□□□ 0.32
TUBGCP3-201ENST00000261965 PUS7Q96PZ0 661 aaKnown RBP17.07■□□□□ 0.32
TUBGCP3-201ENST00000261965 IL1RAPL2Q9NP60 686 aa17.07■□□□□ 0.32
TUBGCP3-201ENST00000261965 RRP9O43818 475 aaKnown RBP17.07■□□□□ 0.32
TUBGCP3-201ENST00000261965 AMPHP49418 695 aa17.07■□□□□ 0.32
TUBGCP3-201ENST00000261965 ABCC3O15438 1527 aa17.06■□□□□ 0.32
TUBGCP3-201ENST00000261965 FIBPO43427 364 aa17.06■□□□□ 0.32
TUBGCP3-201ENST00000261965 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.06■□□□□ 0.32
TUBGCP3-201ENST00000261965 CHAF1AQ13111 956 aaPredicted RBP17.06■□□□□ 0.32
TUBGCP3-201ENST00000261965 VPS37CA5D8V6 355 aaPredicted RBP17.05■□□□□ 0.32
TUBGCP3-201ENST00000261965 EIF2S2P20042 333 aaKnown RBP17.05■□□□□ 0.32
TUBGCP3-201ENST00000261965 NGDNQ8NEJ9 315 aaKnown RBP17.05■□□□□ 0.32
TUBGCP3-201ENST00000261965 ZSCAN30Q86W11 494 aa17.05■□□□□ 0.32
TUBGCP3-201ENST00000261965 RABEP1Q15276 862 aa17.05■□□□□ 0.32
TUBGCP3-201ENST00000261965 CCDC173Q0VFZ6 552 aa17.04■□□□□ 0.32
TUBGCP3-201ENST00000261965 KIAA1210Q9ULL0 1709 aa17.04■□□□□ 0.32
TUBGCP3-201ENST00000261965 IGSF3O75054 1194 aa17.04■□□□□ 0.32
TUBGCP3-201ENST00000261965 CEP85Q6P2H3 762 aa17.04■□□□□ 0.32
TUBGCP3-201ENST00000261965 TSC1Q92574 1164 aa17.04■□□□□ 0.32
TUBGCP3-201ENST00000261965 STK31Q9BXU1 1019 aa17.04■□□□□ 0.32
TUBGCP3-201ENST00000261965 DCTPP1Q9H773 170 aa17.04■□□□□ 0.32
TUBGCP3-201ENST00000261965 CIZ1Q9ULV3 898 aaPredicted RBP17.04■□□□□ 0.32
TUBGCP3-201ENST00000261965 NPHP1O15259 732 aa17.04■□□□□ 0.32
TUBGCP3-201ENST00000261965 NUCB2P80303 420 aa17.04■□□□□ 0.32
TUBGCP3-201ENST00000261965 ABCA9Q8IUA7 1624 aa17.03■□□□□ 0.32
TUBGCP3-201ENST00000261965 ARHGAP45Q92619 1136 aa17.03■□□□□ 0.32
TUBGCP3-201ENST00000261965 CAMSAP1Q5T5Y3 1602 aa17.03■□□□□ 0.32
TUBGCP3-201ENST00000261965 RBM33Q96EV2 1170 aaKnown RBP17.02■□□□□ 0.32
TUBGCP3-201ENST00000261965 USP26Q9BXU7 913 aa17.02■□□□□ 0.32
TUBGCP3-201ENST00000261965 MSH6P52701 1360 aa17.02■□□□□ 0.32
TUBGCP3-201ENST00000261965 ABCC4O15439 1325 aa17.02■□□□□ 0.32
TUBGCP3-201ENST00000261965 HMMRO75330 724 aa17.02■□□□□ 0.31
TUBGCP3-201ENST00000261965 ANKRD44Q8N8A2 993 aa17.01■□□□□ 0.31
TUBGCP3-201ENST00000261965 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
TUBGCP3-201ENST00000261965 REC8O95072 547 aa17.01■□□□□ 0.31
TUBGCP3-201ENST00000261965 PRIM1P49642 420 aaKnown RBP17.01■□□□□ 0.31
TUBGCP3-201ENST00000261965 ARAP3Q8WWN8 1544 aa17.01■□□□□ 0.31
TUBGCP3-201ENST00000261965 LRRC7Q96NW7 1537 aa17.01■□□□□ 0.31
TUBGCP3-201ENST00000261965 PTMSP20962 102 aa17■□□□□ 0.31
TUBGCP3-201ENST00000261965 SETBP1Q9Y6X0 1596 aa17■□□□□ 0.31
TUBGCP3-201ENST00000261965 NUTM1Q86Y26 1132 aa17■□□□□ 0.31
TUBGCP3-201ENST00000261965 SYAP1Q96A49 352 aaPredicted RBP17■□□□□ 0.31
TUBGCP3-201ENST00000261965 CBX1P83916 185 aa16.99■□□□□ 0.31
TUBGCP3-201ENST00000261965 CEBPAP49715 358 aaPredicted RBP16.99■□□□□ 0.31
TUBGCP3-201ENST00000261965 ACEP12821 1306 aa16.99■□□□□ 0.31
TUBGCP3-201ENST00000261965 ERC2O15083 957 aa16.99■□□□□ 0.31
TUBGCP3-201ENST00000261965 ZNF853P0CG23 659 aa16.99■□□□□ 0.31
TUBGCP3-201ENST00000261965 RIMS2Q9UQ26 1411 aa16.99■□□□□ 0.31
TUBGCP3-201ENST00000261965 FAM135BQ49AJ0 1406 aa16.98■□□□□ 0.31
TUBGCP3-201ENST00000261965 RPAP2Q8IXW5 612 aaPredicted RBP16.98■□□□□ 0.31
TUBGCP3-201ENST00000261965 C17orf53Q8N3J3 647 aaPredicted RBP16.98■□□□□ 0.31
TUBGCP3-201ENST00000261965 METP08581 1390 aa16.98■□□□□ 0.31
TUBGCP3-201ENST00000261965 ANXA1P04083 346 aa16.98■□□□□ 0.31
TUBGCP3-201ENST00000261965 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
TUBGCP3-201ENST00000261965 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
TUBGCP3-201ENST00000261965 FRMPD1Q5SYB0 1578 aa16.98■□□□□ 0.31
TUBGCP3-201ENST00000261965 USP25Q9UHP3 1055 aa16.97■□□□□ 0.31
TUBGCP3-201ENST00000261965 CD163L1Q9NR16 1453 aa16.97■□□□□ 0.31
TUBGCP3-201ENST00000261965 TPM2P07951 284 aa16.97■□□□□ 0.31
TUBGCP3-201ENST00000261965 ZSCAN23Q3MJ62 389 aa16.97■□□□□ 0.31
TUBGCP3-201ENST00000261965 AK9Q5TCS8 1911 aa16.97■□□□□ 0.31
TUBGCP3-201ENST00000261965 NEXMIFQ5QGS0 1516 aa16.97■□□□□ 0.31
TUBGCP3-201ENST00000261965 COL3A1P02461 1466 aaPredicted RBP16.97■□□□□ 0.31
TUBGCP3-201ENST00000261965 ZMYM3Q14202 1370 aa16.96■□□□□ 0.31
TUBGCP3-201ENST00000261965 PNPLA6Q8IY17 1366 aa16.96■□□□□ 0.31
TUBGCP3-201ENST00000261965 NLRP6P59044 892 aa16.96■□□□□ 0.31
TUBGCP3-201ENST00000261965 PTPRMP28827 1452 aa16.96■□□□□ 0.31
TUBGCP3-201ENST00000261965 PDE1AP54750 535 aa16.96■□□□□ 0.31
TUBGCP3-201ENST00000261965 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
TUBGCP3-201ENST00000261965 FERMT3Q86UX7 667 aa16.96■□□□□ 0.31
TUBGCP3-201ENST00000261965 PPLO60437 1756 aa16.96■□□□□ 0.3
TUBGCP3-201ENST00000261965 PPFIA3O75145 1194 aa16.96■□□□□ 0.3
TUBGCP3-201ENST00000261965 ZRSR1Q15695 479 aaKnown RBP16.96■□□□□ 0.3
TUBGCP3-201ENST00000261965 RBSNQ9H1K0 784 aa16.96■□□□□ 0.3
TUBGCP3-201ENST00000261965 NSFL1CQ9UNZ2 370 aaKnown RBP16.96■□□□□ 0.3
TUBGCP3-201ENST00000261965 A0A0G2JS52 829 aa16.95■□□□□ 0.3
TUBGCP3-201ENST00000261965 SPDYE4A6NLX3 237 aa16.95■□□□□ 0.3
TUBGCP3-201ENST00000261965 GNAI2P04899 355 aa16.95■□□□□ 0.3
TUBGCP3-201ENST00000261965 DDIT3P35638 169 aa16.95■□□□□ 0.3
TUBGCP3-201ENST00000261965 KLHL40Q2TBA0 621 aa16.95■□□□□ 0.3
TUBGCP3-201ENST00000261965 LRRFIP2Q9Y608 721 aaKnown RBP16.95■□□□□ 0.3
TUBGCP3-201ENST00000261965 PRR36Q9H6K5 1346 aa16.95■□□□□ 0.3
TUBGCP3-201ENST00000261965 PNMA6EA0A0J9YXQ4 647 aa16.95■□□□□ 0.3
TUBGCP3-201ENST00000261965 CEBPZQ03701 1054 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms