RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 KIAA0232Q92628 1395 aa28.72■■■□□ 2.19
PREB-201ENST00000260643 OFD1O75665 1012 aa28.72■■■□□ 2.19
PREB-201ENST00000260643 TERF1P54274 439 aa28.72■■■□□ 2.19
PREB-201ENST00000260643 NME9Q86XW9 330 aa28.72■■■□□ 2.19
PREB-201ENST00000260643 WAPLQ7Z5K2 1190 aa28.71■■■□□ 2.19
PREB-201ENST00000260643 PDLIM2Q96JY6 352 aa28.71■■■□□ 2.19
PREB-201ENST00000260643 RTL1A6NKG5 1358 aa28.71■■■□□ 2.19
PREB-201ENST00000260643 FAM83GA6ND36 823 aa28.71■■■□□ 2.19
PREB-201ENST00000260643 REC8O95072 547 aa28.71■■■□□ 2.19
PREB-201ENST00000260643 PTPRCP08575 1304 aa28.7■■■□□ 2.19
PREB-201ENST00000260643 NRKQ7Z2Y5 1582 aa28.7■■■□□ 2.18
PREB-201ENST00000260643 CAVIN1Q6NZI2 390 aaKnown RBP28.69■■■□□ 2.18
PREB-201ENST00000260643 FBXO31Q5XUX0 539 aaPredicted RBP28.69■■■□□ 2.18
PREB-201ENST00000260643 OTUD7AQ8TE49 926 aaPredicted RBP28.69■■■□□ 2.18
PREB-201ENST00000260643 WASLO00401 505 aaPredicted RBP28.68■■■□□ 2.18
PREB-201ENST00000260643 MON2Q7Z3U7 1717 aa28.68■■■□□ 2.18
PREB-201ENST00000260643 CHL1O00533 1208 aa28.68■■■□□ 2.18
PREB-201ENST00000260643 PKP1Q13835 747 aa28.68■■■□□ 2.18
PREB-201ENST00000260643 COG3Q96JB2 828 aa28.68■■■□□ 2.18
PREB-201ENST00000260643 OSBPL3Q9H4L5 887 aa28.67■■■□□ 2.18
PREB-201ENST00000260643 ZDHHC9Q9Y397 364 aa28.67■■■□□ 2.18
PREB-201ENST00000260643 A2ML1A8K2U0 1454 aa28.66■■■□□ 2.18
PREB-201ENST00000260643 MSNP26038 577 aaKnown RBP28.66■■■□□ 2.18
PREB-201ENST00000260643 CPS1P31327 1500 aa28.66■■■□□ 2.18
PREB-201ENST00000260643 DCTN1Q14203 1278 aa28.65■■■□□ 2.18
PREB-201ENST00000260643 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.65■■■□□ 2.18
PREB-201ENST00000260643 KIAA1211Q6ZU35 1233 aa28.65■■■□□ 2.18
PREB-201ENST00000260643 RBSNQ9H1K0 784 aa28.65■■■□□ 2.18
PREB-201ENST00000260643 ZRANB1Q9UGI0 708 aa28.65■■■□□ 2.18
PREB-201ENST00000260643 NOL7Q9UMY1 257 aaKnown RBP28.65■■■□□ 2.18
PREB-201ENST00000260643 MSH6P52701 1360 aa28.65■■■□□ 2.18
PREB-201ENST00000260643 AK9Q5TCS8 1911 aa28.64■■■□□ 2.18
PREB-201ENST00000260643 ERC2O15083 957 aa28.64■■■□□ 2.18
PREB-201ENST00000260643 CYB5RLQ6IPT4 315 aa28.64■■■□□ 2.17
PREB-201ENST00000260643 ZGPATQ8N5A5 531 aaKnown RBP28.64■■■□□ 2.17
PREB-201ENST00000260643 C3P01024 1663 aa28.63■■■□□ 2.17
PREB-201ENST00000260643 GPT2Q8TD30 523 aa28.63■■■□□ 2.17
PREB-201ENST00000260643 ZNF500O60304 480 aaPredicted RBP28.62■■■□□ 2.17
PREB-201ENST00000260643 STAG3Q9UJ98 1225 aa28.62■■■□□ 2.17
PREB-201ENST00000260643 NCLP19338 710 aaKnown RBP28.61■■■□□ 2.17
PREB-201ENST00000260643 RRS1Q15050 365 aaKnown RBP28.61■■■□□ 2.17
PREB-201ENST00000260643 PRPF40AO75400 957 aaKnown RBP28.61■■■□□ 2.17
PREB-201ENST00000260643 PRIM1P49642 420 aaKnown RBP28.61■■■□□ 2.17
PREB-201ENST00000260643 SMARCA5O60264 1052 aaPredicted RBP28.6■■■□□ 2.17
PREB-201ENST00000260643 HMMRO75330 724 aa28.6■■■□□ 2.17
PREB-201ENST00000260643 MEIS3Q99687 375 aa28.6■■■□□ 2.17
PREB-201ENST00000260643 PDCL3Q9H2J4 239 aa28.59■■■□□ 2.17
PREB-201ENST00000260643 AKAP12Q02952 1782 aa28.59■■■□□ 2.17
PREB-201ENST00000260643 MCM2P49736 904 aa28.58■■■□□ 2.17
PREB-201ENST00000260643 LRSAM1Q6UWE0 723 aa28.58■■■□□ 2.17
PREB-201ENST00000260643 NUDT16Q96DE0 195 aaKnown RBP28.58■■■□□ 2.17
PREB-201ENST00000260643 SIRT1Q96EB6 747 aa28.58■■■□□ 2.17
PREB-201ENST00000260643 PPP6R1Q9UPN7 881 aa28.58■■■□□ 2.17
PREB-201ENST00000260643 CCDC61Q9Y6R9 512 aa28.58■■■□□ 2.17
PREB-201ENST00000260643 SPATA31D1Q6ZQQ2 1576 aa28.57■■■□□ 2.16
PREB-201ENST00000260643 MCM5P33992 734 aa28.57■■■□□ 2.16
PREB-201ENST00000260643 KRT24Q2M2I5 525 aa28.56■■■□□ 2.16
PREB-201ENST00000260643 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.56■■■□□ 2.16
PREB-201ENST00000260643 PDE1AP54750 535 aa28.55■■■□□ 2.16
PREB-201ENST00000260643 NRXN3Q9Y4C0 1643 aa28.55■■■□□ 2.16
PREB-201ENST00000260643 MBD3O95983 291 aa28.55■■■□□ 2.16
PREB-201ENST00000260643 EIF4A2Q14240 407 aaKnown RBP28.55■■■□□ 2.16
PREB-201ENST00000260643 TMEM63CQ9P1W3 806 aa28.54■■■□□ 2.16
PREB-201ENST00000260643 TECPR2O15040 1411 aa28.54■■■□□ 2.16
PREB-201ENST00000260643 CRB1P82279 1406 aa28.54■■■□□ 2.16
PREB-201ENST00000260643 CUL4AQ13619 759 aa28.54■■■□□ 2.16
PREB-201ENST00000260643 IL17RAQ96F46 866 aa28.54■■■□□ 2.16
PREB-201ENST00000260643 AEBP1Q8IUX7 1158 aa28.53■■■□□ 2.16
PREB-201ENST00000260643 SALL3Q9BXA9 1300 aa28.53■■■□□ 2.16
PREB-201ENST00000260643 SULT6B1Q6IMI4 303 aa28.52■■■□□ 2.16
PREB-201ENST00000260643 RBM27Q9P2N5 1060 aaKnown RBP28.52■■■□□ 2.16
PREB-201ENST00000260643 BRD1O95696 1058 aa28.52■■■□□ 2.16
PREB-201ENST00000260643 TMX3Q96JJ7 454 aa28.52■■■□□ 2.16
PREB-201ENST00000260643 ZKSCAN5Q9Y2L8 839 aa28.51■■■□□ 2.16
PREB-201ENST00000260643 ITSN1Q15811 1721 aa28.51■■■□□ 2.15
PREB-201ENST00000260643 CCT4P50991 539 aaKnown RBP28.51■■■□□ 2.15
PREB-201ENST00000260643 ANAPC15P60006 121 aa28.51■■■□□ 2.15
PREB-201ENST00000260643 INTS4Q96HW7 963 aaKnown RBP28.51■■■□□ 2.15
PREB-201ENST00000260643 RGPD1P0DJD0 1748 aa28.5■■■□□ 2.15
PREB-201ENST00000260643 AGLP35573 1532 aa28.5■■■□□ 2.15
PREB-201ENST00000260643 SLC4A2P04920 1241 aa28.49■■■□□ 2.15
PREB-201ENST00000260643 MCM10Q7L590 875 aa28.49■■■□□ 2.15
PREB-201ENST00000260643 METP08581 1390 aa28.49■■■□□ 2.15
PREB-201ENST00000260643 APBB1O00213 710 aa28.48■■■□□ 2.15
PREB-201ENST00000260643 NEK4P51957 841 aa28.48■■■□□ 2.15
PREB-201ENST00000260643 VSIG10Q8N0Z9 540 aa28.48■■■□□ 2.15
PREB-201ENST00000260643 ESYT1Q9BSJ8 1104 aa28.48■■■□□ 2.15
PREB-201ENST00000260643 TUBGCP6Q96RT7 1819 aa28.48■■■□□ 2.15
PREB-201ENST00000260643 SSH2Q76I76 1423 aa28.48■■■□□ 2.15
PREB-201ENST00000260643 ARHGEF10O15013 1369 aa28.47■■■□□ 2.15
PREB-201ENST00000260643 SYCE3A1L190 88 aa28.46■■■□□ 2.15
PREB-201ENST00000260643 CSPP1Q1MSJ5 1256 aa28.46■■■□□ 2.15
PREB-201ENST00000260643 CCDC39Q9UFE4 941 aa28.46■■■□□ 2.15
PREB-201ENST00000260643 NSFL1CQ9UNZ2 370 aaKnown RBP28.46■■■□□ 2.15
PREB-201ENST00000260643 OVOS2A0A0J9YW53 1432 aa28.46■■■□□ 2.15
PREB-201ENST00000260643 OVOS2Q6IE36 1432 aa28.46■■■□□ 2.15
PREB-201ENST00000260643 NCKAP5LQ9HCH0 1330 aa28.45■■■□□ 2.15
PREB-201ENST00000260643 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.45■■■□□ 2.14
PREB-201ENST00000260643 MCCP23508 829 aa28.44■■■□□ 2.14
PREB-201ENST00000260643 EPB41L2O43491 1005 aaKnown RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms