RNA–Protein interactions for RNA: ENST00000258742.9

NUPL2-201, Transcript of nucleoporin like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUPL2, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUPL2-201ENST00000258742 KIF1AQ12756 1690 aa16.4■□□□□ 0.22
NUPL2-201ENST00000258742 CHL1O00533 1208 aa16.4■□□□□ 0.22
NUPL2-201ENST00000258742 RGS3P49796 1198 aa16.4■□□□□ 0.22
NUPL2-201ENST00000258742 CADPS2Q86UW7 1296 aa16.4■□□□□ 0.22
NUPL2-201ENST00000258742 MRPL50Q8N5N7 158 aaKnown RBP16.4■□□□□ 0.22
NUPL2-201ENST00000258742 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
NUPL2-201ENST00000258742 TMEM57Q8N5G2 664 aa16.39■□□□□ 0.21
NUPL2-201ENST00000258742 C8orf58Q8NAV2 365 aa16.39■□□□□ 0.21
NUPL2-201ENST00000258742 DLG5Q8TDM6 1919 aa16.39■□□□□ 0.21
NUPL2-201ENST00000258742 GNAT3A8MTJ3 354 aa16.38■□□□□ 0.21
NUPL2-201ENST00000258742 GCP02774 474 aa16.38■□□□□ 0.21
NUPL2-201ENST00000258742 DDX17Q92841 729 aaKnown RBP16.38■□□□□ 0.21
NUPL2-201ENST00000258742 API5Q9BZZ5 524 aaKnown RBP16.38■□□□□ 0.21
NUPL2-201ENST00000258742 TSPYL4Q9UJ04 414 aa16.38■□□□□ 0.21
NUPL2-201ENST00000258742 MARF1Q9Y4F3 1742 aaKnown RBP16.38■□□□□ 0.21
NUPL2-201ENST00000258742 NFAT5O94916 1531 aa16.38■□□□□ 0.21
NUPL2-201ENST00000258742 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
NUPL2-201ENST00000258742 ERICH6Q7L0X2 663 aa16.38■□□□□ 0.21
NUPL2-201ENST00000258742 BACH2Q9BYV9 841 aa16.38■□□□□ 0.21
NUPL2-201ENST00000258742 PCDHB15Q9Y5E8 787 aa16.38■□□□□ 0.21
NUPL2-201ENST00000258742 SKAP1Q86WV1 359 aa16.37■□□□□ 0.21
NUPL2-201ENST00000258742 MAP3K5Q99683 1374 aa16.37■□□□□ 0.21
NUPL2-201ENST00000258742 CRB1P82279 1406 aa16.36■□□□□ 0.21
NUPL2-201ENST00000258742 USHBP1Q8N6Y0 703 aa16.36■□□□□ 0.21
NUPL2-201ENST00000258742 SLAIN2Q9P270 581 aa16.36■□□□□ 0.21
NUPL2-201ENST00000258742 USP19O94966 1318 aa16.35■□□□□ 0.21
NUPL2-201ENST00000258742 FAM161AQ3B820 660 aa16.34■□□□□ 0.21
NUPL2-201ENST00000258742 ARHGEF25Q86VW2 580 aa16.34■□□□□ 0.21
NUPL2-201ENST00000258742 NPHP3Q7Z494 1330 aa16.34■□□□□ 0.21
NUPL2-201ENST00000258742 LTN1O94822 1766 aa16.34■□□□□ 0.21
NUPL2-201ENST00000258742 SLIT3O75094 1523 aa16.34■□□□□ 0.21
NUPL2-201ENST00000258742 BRINP3Q76B58 766 aa16.33■□□□□ 0.21
NUPL2-201ENST00000258742 HDAC1Q13547 482 aaPredicted RBP16.32■□□□□ 0.2
NUPL2-201ENST00000258742 NBPF6Q5VWK0 638 aa16.32■□□□□ 0.2
NUPL2-201ENST00000258742 NPM2Q86SE8 214 aaKnown RBP16.32■□□□□ 0.2
NUPL2-201ENST00000258742 NBPF4Q96M43 638 aa16.32■□□□□ 0.2
NUPL2-201ENST00000258742 ZBTB40Q9NUA8 1239 aa16.32■□□□□ 0.2
NUPL2-201ENST00000258742 PLEKHO1Q53GL0 409 aaPredicted RBP16.31■□□□□ 0.2
NUPL2-201ENST00000258742 ANKRD24Q8TF21 1146 aa16.31■□□□□ 0.2
NUPL2-201ENST00000258742 MIS18AQ9NYP9 233 aa16.31■□□□□ 0.2
NUPL2-201ENST00000258742 ABCC4O15439 1325 aa16.31■□□□□ 0.2
NUPL2-201ENST00000258742 BABAM1Q9NWV8 329 aa16.31■□□□□ 0.2
NUPL2-201ENST00000258742 TRPM3Q9HCF6 1732 aaPredicted RBP16.3■□□□□ 0.2
NUPL2-201ENST00000258742 PTPRCP08575 1304 aa16.3■□□□□ 0.2
NUPL2-201ENST00000258742 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
NUPL2-201ENST00000258742 AMOTQ4VCS5 1084 aa16.3■□□□□ 0.2
NUPL2-201ENST00000258742 STK31Q9BXU1 1019 aa16.3■□□□□ 0.2
NUPL2-201ENST00000258742 PHRF1Q9P1Y6 1649 aaKnown RBP16.29■□□□□ 0.2
NUPL2-201ENST00000258742 KRT24Q2M2I5 525 aa16.29■□□□□ 0.2
NUPL2-201ENST00000258742 PDZRN3Q9UPQ7 1066 aa16.29■□□□□ 0.2
NUPL2-201ENST00000258742 C1orf141Q5JVX7 400 aa16.28■□□□□ 0.2
NUPL2-201ENST00000258742 LRRC59Q96AG4 307 aaKnown RBP16.28■□□□□ 0.2
NUPL2-201ENST00000258742 SOS1Q07889 1333 aaPredicted RBP16.28■□□□□ 0.2
NUPL2-201ENST00000258742 ZC3H6P61129 1189 aaKnown RBP16.28■□□□□ 0.2
NUPL2-201ENST00000258742 ZNF530Q6P9A1 599 aaPredicted RBP16.28■□□□□ 0.2
NUPL2-201ENST00000258742 IPO9Q96P70 1041 aaKnown RBP16.27■□□□□ 0.2
NUPL2-201ENST00000258742 ZBTB7BO15156 539 aaPredicted RBP16.26■□□□□ 0.19
NUPL2-201ENST00000258742 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
NUPL2-201ENST00000258742 AKAP4Q5JQC9 854 aa16.26■□□□□ 0.19
NUPL2-201ENST00000258742 CCDC30Q5VVM6 783 aa16.26■□□□□ 0.19
NUPL2-201ENST00000258742 IL17REQ8NFR9 667 aa16.26■□□□□ 0.19
NUPL2-201ENST00000258742 CHMP4AQ9BY43 222 aa16.26■□□□□ 0.19
NUPL2-201ENST00000258742 TNS3Q68CZ2 1445 aa16.26■□□□□ 0.19
NUPL2-201ENST00000258742 PXDNQ92626 1479 aa16.26■□□□□ 0.19
NUPL2-201ENST00000258742 TEFQ10587 303 aa16.25■□□□□ 0.19
NUPL2-201ENST00000258742 LRRC37A3O60309 1634 aa16.24■□□□□ 0.19
NUPL2-201ENST00000258742 C8orf34Q49A92 452 aa16.24■□□□□ 0.19
NUPL2-201ENST00000258742 ALS2Q96Q42 1657 aa16.24■□□□□ 0.19
NUPL2-201ENST00000258742 CSB-PGBD3P0DP91 1061 aa16.23■□□□□ 0.19
NUPL2-201ENST00000258742 INTS3Q68E01 1043 aaKnown RBP16.23■□□□□ 0.19
NUPL2-201ENST00000258742 DDRGK1Q96HY6 314 aa16.23■□□□□ 0.19
NUPL2-201ENST00000258742 ZBTB47Q9UFB7 747 aaPredicted RBP16.23■□□□□ 0.19
NUPL2-201ENST00000258742 MSH5O43196 834 aa16.23■□□□□ 0.19
NUPL2-201ENST00000258742 SMC5Q8IY18 1101 aa16.23■□□□□ 0.19
NUPL2-201ENST00000258742 RAPGEF4Q8WZA2 1011 aa16.23■□□□□ 0.19
NUPL2-201ENST00000258742 NLRP2Q9NX02 1062 aa16.23■□□□□ 0.19
NUPL2-201ENST00000258742 NOP58Q9Y2X3 529 aaKnown RBP16.23■□□□□ 0.19
NUPL2-201ENST00000258742 ROBO1Q9Y6N7 1651 aa16.22■□□□□ 0.19
NUPL2-201ENST00000258742 ERBB3P21860 1342 aa16.22■□□□□ 0.19
NUPL2-201ENST00000258742 NCAPD2Q15021 1401 aa16.22■□□□□ 0.19
NUPL2-201ENST00000258742 GCC1Q96CN9 775 aa16.22■□□□□ 0.19
NUPL2-201ENST00000258742 AXIN2Q9Y2T1 843 aa16.22■□□□□ 0.19
NUPL2-201ENST00000258742 SPATA31A3Q5VYP0 1347 aa16.22■□□□□ 0.19
NUPL2-201ENST00000258742 C1orf115Q9H7X2 142 aa16.21■□□□□ 0.19
NUPL2-201ENST00000258742 CEMIPQ8WUJ3 1361 aa16.21■□□□□ 0.19
NUPL2-201ENST00000258742 SOS2Q07890 1332 aaPredicted RBP16.21■□□□□ 0.19
NUPL2-201ENST00000258742 CCT4P50991 539 aaKnown RBP16.21■□□□□ 0.18
NUPL2-201ENST00000258742 MED1Q15648 1581 aaPredicted RBP16.2■□□□□ 0.18
NUPL2-201ENST00000258742 CERKQ8TCT0 537 aa16.2■□□□□ 0.18
NUPL2-201ENST00000258742 UPF2Q9HAU5 1272 aaKnown RBP16.2■□□□□ 0.18
NUPL2-201ENST00000258742 NHSL1Q5SYE7 1610 aa16.19■□□□□ 0.18
NUPL2-201ENST00000258742 BTBD11A6QL63 1104 aa16.19■□□□□ 0.18
NUPL2-201ENST00000258742 TATP17735 454 aaPredicted RBP16.19■□□□□ 0.18
NUPL2-201ENST00000258742 PIP4K2BP78356 416 aa16.19■□□□□ 0.18
NUPL2-201ENST00000258742 HDGFL1Q5TGJ6 251 aa16.19■□□□□ 0.18
NUPL2-201ENST00000258742 SLC4A10Q6U841 1118 aa16.19■□□□□ 0.18
NUPL2-201ENST00000258742 FKBP5Q13451 457 aaPredicted RBP16.18■□□□□ 0.18
NUPL2-201ENST00000258742 MPRIPQ6WCQ1 1025 aa16.18■□□□□ 0.18
NUPL2-201ENST00000258742 CABLES1Q8TDN4 633 aa16.18■□□□□ 0.18
NUPL2-201ENST00000258742 NECTIN2Q92692 538 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms