RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 DCTPP1Q9H773 170 aa16.6■□□□□ 0.25
VHL-201ENST00000256474 RIMS2Q9UQ26 1411 aa16.6■□□□□ 0.25
VHL-201ENST00000256474 FAM135BQ49AJ0 1406 aa16.6■□□□□ 0.25
VHL-201ENST00000256474 COL3A1P02461 1466 aaPredicted RBP16.59■□□□□ 0.25
VHL-201ENST00000256474 MYO3AQ8NEV4 1616 aa16.59■□□□□ 0.25
VHL-201ENST00000256474 ZC3H13Q5T200 1668 aaKnown RBP16.59■□□□□ 0.25
VHL-201ENST00000256474 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
VHL-201ENST00000256474 LMOD2Q6P5Q4 547 aa16.59■□□□□ 0.25
VHL-201ENST00000256474 PNPLA6Q8IY17 1366 aa16.58■□□□□ 0.24
VHL-201ENST00000256474 ZNF853P0CG23 659 aa16.58■□□□□ 0.24
VHL-201ENST00000256474 RABEP1Q15276 862 aa16.58■□□□□ 0.24
VHL-201ENST00000256474 ANKRD44Q8N8A2 993 aa16.58■□□□□ 0.24
VHL-201ENST00000256474 ARHGEF28Q8N1W1 1705 aaKnown RBP16.58■□□□□ 0.24
VHL-201ENST00000256474 SIGLEC1Q9BZZ2 1709 aa16.58■□□□□ 0.24
VHL-201ENST00000256474 PRR36Q9H6K5 1346 aa16.58■□□□□ 0.24
VHL-201ENST00000256474 HMMRO75330 724 aa16.58■□□□□ 0.24
VHL-201ENST00000256474 MTHFSDQ2M296 383 aaKnown RBP16.57■□□□□ 0.24
VHL-201ENST00000256474 NLRP6P59044 892 aa16.57■□□□□ 0.24
VHL-201ENST00000256474 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
VHL-201ENST00000256474 PIK3C2BO00750 1634 aa16.57■□□□□ 0.24
VHL-201ENST00000256474 USP26Q9BXU7 913 aa16.57■□□□□ 0.24
VHL-201ENST00000256474 ZFYVE9O95405 1425 aa16.57■□□□□ 0.24
VHL-201ENST00000256474 ERBB4Q15303 1308 aa16.56■□□□□ 0.24
VHL-201ENST00000256474 CIZ1Q9ULV3 898 aaPredicted RBP16.56■□□□□ 0.24
VHL-201ENST00000256474 TTC21BQ7Z4L5 1316 aa16.56■□□□□ 0.24
VHL-201ENST00000256474 PLCB2Q00722 1185 aa16.56■□□□□ 0.24
VHL-201ENST00000256474 SKOR2Q2VWA4 1001 aaPredicted RBP16.56■□□□□ 0.24
VHL-201ENST00000256474 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
VHL-201ENST00000256474 NUTM1Q86Y26 1132 aa16.56■□□□□ 0.24
VHL-201ENST00000256474 ANXA1P04083 346 aa16.55■□□□□ 0.24
VHL-201ENST00000256474 REC8O95072 547 aa16.55■□□□□ 0.24
VHL-201ENST00000256474 RPAP2Q8IXW5 612 aaPredicted RBP16.55■□□□□ 0.24
VHL-201ENST00000256474 DDX54Q8TDD1 881 aaKnown RBP16.54■□□□□ 0.24
VHL-201ENST00000256474 OS9Q13438 667 aaPredicted RBP16.54■□□□□ 0.24
VHL-201ENST00000256474 ADGRB2O60241 1585 aa16.53■□□□□ 0.24
VHL-201ENST00000256474 ZMYM3Q14202 1370 aa16.53■□□□□ 0.24
VHL-201ENST00000256474 ERC2O15083 957 aa16.53■□□□□ 0.24
VHL-201ENST00000256474 MSNP26038 577 aaKnown RBP16.53■□□□□ 0.24
VHL-201ENST00000256474 ARHGEF40Q8TER5 1519 aa16.53■□□□□ 0.24
VHL-201ENST00000256474 HDGFP51858 240 aaKnown RBP16.53■□□□□ 0.24
VHL-201ENST00000256474 ALKQ9UM73 1620 aa16.52■□□□□ 0.24
VHL-201ENST00000256474 MAP3K19Q56UN5 1328 aa16.52■□□□□ 0.24
VHL-201ENST00000256474 HAP1P54257 671 aaPredicted RBP16.52■□□□□ 0.24
VHL-201ENST00000256474 LRRFIP2Q9Y608 721 aaKnown RBP16.52■□□□□ 0.24
VHL-201ENST00000256474 PNMA6EA0A0J9YXQ4 647 aa16.52■□□□□ 0.23
VHL-201ENST00000256474 SYCE3A1L190 88 aa16.52■□□□□ 0.23
VHL-201ENST00000256474 CHL1O00533 1208 aa16.52■□□□□ 0.23
VHL-201ENST00000256474 GNAI2P04899 355 aa16.52■□□□□ 0.23
VHL-201ENST00000256474 NUCB2P80303 420 aa16.52■□□□□ 0.23
VHL-201ENST00000256474 PDE1AP54750 535 aa16.51■□□□□ 0.23
VHL-201ENST00000256474 EDC4Q6P2E9 1401 aaKnown RBP16.51■□□□□ 0.23
VHL-201ENST00000256474 PTMAP06454 111 aaKnown RBP16.51■□□□□ 0.23
VHL-201ENST00000256474 MYO5BQ9ULV0 1848 aa16.51■□□□□ 0.23
VHL-201ENST00000256474 NEURL4Q96JN8 1562 aa16.51■□□□□ 0.23
VHL-201ENST00000256474 DIP2CQ9Y2E4 1556 aa16.51■□□□□ 0.23
VHL-201ENST00000256474 SURF6O75683 361 aaKnown RBP16.5■□□□□ 0.23
VHL-201ENST00000256474 RTL1A6NKG5 1358 aa16.49■□□□□ 0.23
VHL-201ENST00000256474 DDIT3P35638 169 aa16.49■□□□□ 0.23
VHL-201ENST00000256474 LRRCC1Q9C099 1032 aa16.49■□□□□ 0.23
VHL-201ENST00000256474 PALD1Q9ULE6 856 aa16.49■□□□□ 0.23
VHL-201ENST00000256474 AK9Q5TCS8 1911 aa16.49■□□□□ 0.23
VHL-201ENST00000256474 CLCN1P35523 988 aa16.49■□□□□ 0.23
VHL-201ENST00000256474 FLIIQ13045 1269 aa16.49■□□□□ 0.23
VHL-201ENST00000256474 EYA1Q99502 592 aa16.49■□□□□ 0.23
VHL-201ENST00000256474 VIRMAQ69YN4 1812 aaKnown RBP16.49■□□□□ 0.23
VHL-201ENST00000256474 PRIM1P49642 420 aaKnown RBP16.49■□□□□ 0.23
VHL-201ENST00000256474 PTCH1Q13635 1447 aa16.49■□□□□ 0.23
VHL-201ENST00000256474 ZSCAN23Q3MJ62 389 aa16.48■□□□□ 0.23
VHL-201ENST00000256474 CPS1P31327 1500 aa16.48■□□□□ 0.23
VHL-201ENST00000256474 BRPF1P55201 1214 aaPredicted RBP16.48■□□□□ 0.23
VHL-201ENST00000256474 MCCP23508 829 aa16.48■□□□□ 0.23
VHL-201ENST00000256474 NSFL1CQ9UNZ2 370 aaKnown RBP16.48■□□□□ 0.23
VHL-201ENST00000256474 MX1P20591 662 aa16.47■□□□□ 0.23
VHL-201ENST00000256474 UNC5CLQ8IV45 518 aa16.47■□□□□ 0.23
VHL-201ENST00000256474 ABTB2Q8N961 1025 aa16.47■□□□□ 0.23
VHL-201ENST00000256474 TMX3Q96JJ7 454 aa16.47■□□□□ 0.23
VHL-201ENST00000256474 PHAXQ9H814 394 aaKnown RBP16.47■□□□□ 0.23
VHL-201ENST00000256474 NEO1Q92859 1461 aa16.47■□□□□ 0.23
VHL-201ENST00000256474 LTKP29376 864 aa16.47■□□□□ 0.23
VHL-201ENST00000256474 KLHL40Q2TBA0 621 aa16.47■□□□□ 0.23
VHL-201ENST00000256474 UBTFL1P0CB47 393 aaPredicted RBP16.47■□□□□ 0.23
VHL-201ENST00000256474 HDGFL1Q5TGJ6 251 aa16.47■□□□□ 0.23
VHL-201ENST00000256474 CHMP3Q9Y3E7 222 aa16.47■□□□□ 0.23
VHL-201ENST00000256474 ARHGAP31Q2M1Z3 1444 aa16.46■□□□□ 0.23
VHL-201ENST00000256474 AMOTL2Q9Y2J4 779 aa16.46■□□□□ 0.23
VHL-201ENST00000256474 RBM10P98175 930 aaKnown RBP16.46■□□□□ 0.23
VHL-201ENST00000256474 HSP90AA2PQ14568 343 aaPredicted RBP16.46■□□□□ 0.23
VHL-201ENST00000256474 RBSNQ9H1K0 784 aa16.46■□□□□ 0.23
VHL-201ENST00000256474 ROBO2Q9HCK4 1378 aa16.46■□□□□ 0.23
VHL-201ENST00000256474 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
VHL-201ENST00000256474 CCT4P50991 539 aaKnown RBP16.45■□□□□ 0.22
VHL-201ENST00000256474 CCDC9Q9Y3X0 531 aaKnown RBP16.45■□□□□ 0.22
VHL-201ENST00000256474 MAP2P11137 1827 aaKnown RBP16.45■□□□□ 0.22
VHL-201ENST00000256474 CPA1P15085 419 aa16.45■□□□□ 0.22
VHL-201ENST00000256474 USP32Q8NFA0 1604 aa16.44■□□□□ 0.22
VHL-201ENST00000256474 LMBRD1Q9NUN5 540 aa16.44■□□□□ 0.22
VHL-201ENST00000256474 EID1Q9Y6B2 187 aa16.44■□□□□ 0.22
VHL-201ENST00000256474 TSPOAP1O95153 1857 aa16.44■□□□□ 0.22
VHL-201ENST00000256474 CCDC30Q5VVM6 783 aa16.44■□□□□ 0.22
VHL-201ENST00000256474 PTPRCP08575 1304 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms