RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 IFI16Q16666 785 aaKnown RBP10.55□□□□□ -0.72
LRP1-201ENST00000243077 PDRG1Q9NUG6 133 aa10.55□□□□□ -0.72
LRP1-201ENST00000243077 ANKRD30BQ9BXX2 1392 aa10.55□□□□□ -0.72
LRP1-201ENST00000243077 LRRC27Q9C0I9 530 aa10.55□□□□□ -0.72
LRP1-201ENST00000243077 CCDC27Q2M243 656 aa10.55□□□□□ -0.72
LRP1-201ENST00000243077 CNKSR2Q8WXI2 1034 aa10.55□□□□□ -0.72
LRP1-201ENST00000243077 KIF1BPQ96EK5 621 aa10.55□□□□□ -0.72
LRP1-201ENST00000243077 LRRC9Q6ZRR7 1453 aa10.54□□□□□ -0.72
LRP1-201ENST00000243077 UQCRHLA0A096LP55 91 aa10.54□□□□□ -0.72
LRP1-201ENST00000243077 UQCRHP07919 91 aa10.54□□□□□ -0.72
LRP1-201ENST00000243077 DNAAF4Q8WXU2 420 aa10.54□□□□□ -0.72
LRP1-201ENST00000243077 PATL2C9JE40 543 aaKnown RBP10.54□□□□□ -0.72
LRP1-201ENST00000243077 MINK1Q8N4C8 1332 aaPredicted RBP10.54□□□□□ -0.72
LRP1-201ENST00000243077 GOLIM4O00461 696 aa10.54□□□□□ -0.72
LRP1-201ENST00000243077 PODXL2Q9NZ53 605 aa10.54□□□□□ -0.72
LRP1-201ENST00000243077 KRT18P05783 430 aaKnown RBP10.54□□□□□ -0.72
LRP1-201ENST00000243077 CCDC172P0C7W6 258 aa10.54□□□□□ -0.72
LRP1-201ENST00000243077 KIAA1328Q86T90 577 aa10.54□□□□□ -0.72
LRP1-201ENST00000243077 SPG7Q9UQ90 795 aa10.54□□□□□ -0.72
LRP1-201ENST00000243077 CETN1Q12798 172 aa10.54□□□□□ -0.72
LRP1-201ENST00000243077 ERICH3Q5RHP9 1530 aa10.54□□□□□ -0.72
LRP1-201ENST00000243077 KRI1Q8N9T8 703 aaKnown RBP10.54□□□□□ -0.72
LRP1-201ENST00000243077 CASQ1P31415 396 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 PPP4R3BQ5MIZ7 849 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 OSCARQ8IYS5 282 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 HMGB1P1B2RPK0 211 aaPredicted RBP10.53□□□□□ -0.72
LRP1-201ENST00000243077 STAMBPO95630 424 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 FMNL3Q8IVF7 1028 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 BMP15O95972 392 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 CEP126Q9P2H0 1117 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 AMPD3Q01432 767 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 FKBP15Q5T1M5 1219 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 UBAC1Q9BSL1 405 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 IVLP07476 585 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 PAFAH1B1P43034 410 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 PDE4CQ08493 712 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 TTC39AQ5SRH9 613 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 ATAD2BQ9ULI0 1458 aa10.53□□□□□ -0.72
LRP1-201ENST00000243077 DDX19AQ9NUU7 478 aaKnown RBP10.52□□□□□ -0.72
LRP1-201ENST00000243077 FIBPO43427 364 aa10.52□□□□□ -0.72
LRP1-201ENST00000243077 KIAA1107Q9UPP5 1409 aa10.52□□□□□ -0.72
LRP1-201ENST00000243077 SLC4A2P04920 1241 aa10.52□□□□□ -0.73
LRP1-201ENST00000243077 TSG101Q99816 390 aa10.52□□□□□ -0.73
LRP1-201ENST00000243077 RNF41Q9H4P4 317 aaPredicted RBP10.52□□□□□ -0.73
LRP1-201ENST00000243077 GAPVD1Q14C86 1478 aa10.52□□□□□ -0.73
LRP1-201ENST00000243077 CTR9Q6PD62 1173 aa10.52□□□□□ -0.73
LRP1-201ENST00000243077 TTLL5Q6EMB2 1281 aa10.52□□□□□ -0.73
LRP1-201ENST00000243077 HMG20BQ9P0W2 317 aa10.52□□□□□ -0.73
LRP1-201ENST00000243077 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.52□□□□□ -0.731e-6■■□□□ 13.9
LRP1-201ENST00000243077 V9GYY5 206 aaPredicted RBP10.52□□□□□ -0.73
LRP1-201ENST00000243077 MAP2K1Q02750 393 aaPredicted RBP10.52□□□□□ -0.73
LRP1-201ENST00000243077 STK11IPQ8N1F8 1099 aa10.52□□□□□ -0.73
LRP1-201ENST00000243077 HDGFL1Q5TGJ6 251 aa10.52□□□□□ -0.73
LRP1-201ENST00000243077 PTPRCP08575 1304 aa10.51□□□□□ -0.73
LRP1-201ENST00000243077 TNIP1Q15025 636 aa10.51□□□□□ -0.73
LRP1-201ENST00000243077 DAPK1P53355 1430 aa10.51□□□□□ -0.73
LRP1-201ENST00000243077 TRAF1Q13077 416 aa10.51□□□□□ -0.73
LRP1-201ENST00000243077 NLRP6P59044 892 aa10.51□□□□□ -0.73
LRP1-201ENST00000243077 ENOX2Q16206 610 aaKnown RBP10.51□□□□□ -0.73
LRP1-201ENST00000243077 SPATA24Q86W54 205 aa10.51□□□□□ -0.73
LRP1-201ENST00000243077 ZSCAN16Q9H4T2 348 aaPredicted RBP10.51□□□□□ -0.73
LRP1-201ENST00000243077 FERMT1Q9BQL6 677 aa10.51□□□□□ -0.73
LRP1-201ENST00000243077 CCDC178Q5BJE1 867 aa10.51□□□□□ -0.73
LRP1-201ENST00000243077 SLF2Q8IX21 1173 aa10.51□□□□□ -0.73
LRP1-201ENST00000243077 AMOTQ4VCS5 1084 aa10.51□□□□□ -0.73
LRP1-201ENST00000243077 FAM114A1Q8IWE2 563 aa10.51□□□□□ -0.73
LRP1-201ENST00000243077 ANKRD18BA2A2Z9 1011 aa10.5□□□□□ -0.73
LRP1-201ENST00000243077 BCL11BQ9C0K0 894 aaPredicted RBP10.5□□□□□ -0.73
LRP1-201ENST00000243077 A0A087WZG4 1122 aa10.5□□□□□ -0.73
LRP1-201ENST00000243077 TATP17735 454 aaPredicted RBP10.5□□□□□ -0.73
LRP1-201ENST00000243077 TUBB2AQ13885 445 aa10.5□□□□□ -0.73
LRP1-201ENST00000243077 TUBB2BQ9BVA1 445 aa10.5□□□□□ -0.73
LRP1-201ENST00000243077 GIMAP7Q8NHV1 300 aa10.5□□□□□ -0.73
LRP1-201ENST00000243077 LRRFIP2Q9Y608 721 aaKnown RBP10.5□□□□□ -0.73
LRP1-201ENST00000243077 BMS1Q14692 1282 aaKnown RBP10.5□□□□□ -0.73
LRP1-201ENST00000243077 SPECC1LQ69YQ0 1117 aa10.5□□□□□ -0.73
LRP1-201ENST00000243077 PLVAPQ9BX97 442 aa10.5□□□□□ -0.73
LRP1-201ENST00000243077 FANCD2Q9BXW9 1451 aa10.5□□□□□ -0.73
LRP1-201ENST00000243077 IL16Q14005 1332 aa10.5□□□□□ -0.73
LRP1-201ENST00000243077 YEATS4O95619 227 aa10.5□□□□□ -0.73
LRP1-201ENST00000243077 CCDC150Q8NCX0 1101 aa10.5□□□□□ -0.73
LRP1-201ENST00000243077 KCNH5Q8NCM2 988 aa10.5□□□□□ -0.73
LRP1-201ENST00000243077 ABTB2Q8N961 1025 aa10.49□□□□□ -0.73
LRP1-201ENST00000243077 CNNM1Q9NRU3 951 aa10.49□□□□□ -0.73
LRP1-201ENST00000243077 ALS2CR12Q96Q35 445 aa10.49□□□□□ -0.73
LRP1-201ENST00000243077 SLFN5Q08AF3 891 aa10.49□□□□□ -0.73
LRP1-201ENST00000243077 SMC1AQ14683 1233 aaKnown RBP10.49□□□□□ -0.73
LRP1-201ENST00000243077 LIMCH1Q9UPQ0 1083 aa10.49□□□□□ -0.73
LRP1-201ENST00000243077 UBE2HP62256 183 aa10.49□□□□□ -0.73
LRP1-201ENST00000243077 CCDC12Q8WUD4 166 aaPredicted RBP10.49□□□□□ -0.73
LRP1-201ENST00000243077 STXBP4Q6ZWJ1 553 aa10.49□□□□□ -0.73
LRP1-201ENST00000243077 MPHOSPH8Q99549 860 aa10.49□□□□□ -0.73
LRP1-201ENST00000243077 PRKAR2BP31323 418 aa10.49□□□□□ -0.73
LRP1-201ENST00000243077 STARD3NLO95772 234 aa10.49□□□□□ -0.73
LRP1-201ENST00000243077 EIF5P55010 431 aaKnown RBP10.49□□□□□ -0.73
LRP1-201ENST00000243077 GIGYF2Q6Y7W6 1299 aaKnown RBP10.49□□□□□ -0.73
LRP1-201ENST00000243077 STMN4Q9H169 189 aaPredicted RBP10.48□□□□□ -0.73
LRP1-201ENST00000243077 CTAGE1Q96RT6 745 aa10.48□□□□□ -0.73
LRP1-201ENST00000243077 NFE2L2Q16236 605 aa10.48□□□□□ -0.73
LRP1-201ENST00000243077 THEMISQ8N1K5 641 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms