RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CARD11Q9BXL7 1154 aa19.56■□□□□ 0.72
DDX39A-201ENST00000242776 A0A1W2PP64 1363 aa19.55■□□□□ 0.72
DDX39A-201ENST00000242776 LY75O60449 1722 aa19.54■□□□□ 0.72
DDX39A-201ENST00000242776 COL24A1Q17RW2 1714 aa19.54■□□□□ 0.72
DDX39A-201ENST00000242776 MSL1Q68DK7 614 aa19.54■□□□□ 0.72
DDX39A-201ENST00000242776 EDC4Q6P2E9 1401 aaKnown RBP19.54■□□□□ 0.72
DDX39A-201ENST00000242776 IP6K1Q92551 441 aa19.54■□□□□ 0.72
DDX39A-201ENST00000242776 SHANK3Q9BYB0 1731 aa19.54■□□□□ 0.72
DDX39A-201ENST00000242776 FAM208AQ9UK61 1670 aaKnown RBP19.54■□□□□ 0.72
DDX39A-201ENST00000242776 YBX3P16989 372 aaKnown RBP eCLIP19.53■□□□□ 0.722e-7■□□□□ 10
DDX39A-201ENST00000242776 TERF2IPQ9NYB0 399 aa19.53■□□□□ 0.72
DDX39A-201ENST00000242776 CCNL1Q9UK58 526 aaPredicted RBP19.53■□□□□ 0.72
DDX39A-201ENST00000242776 AMPHP49418 695 aa19.51■□□□□ 0.71
DDX39A-201ENST00000242776 ANKRD36BQ8N2N9 1353 aa19.51■□□□□ 0.71
DDX39A-201ENST00000242776 NSD2O96028 1365 aa19.5■□□□□ 0.71
DDX39A-201ENST00000242776 COL23A1Q86Y22 540 aaPredicted RBP19.5■□□□□ 0.71
DDX39A-201ENST00000242776 USHBP1Q8N6Y0 703 aa19.5■□□□□ 0.71
DDX39A-201ENST00000242776 ZCRB1Q8TBF4 217 aaKnown RBP19.5■□□□□ 0.71
DDX39A-201ENST00000242776 MAP3K19Q56UN5 1328 aa19.5■□□□□ 0.71
DDX39A-201ENST00000242776 HOXC9P31274 260 aa19.49■□□□□ 0.71
DDX39A-201ENST00000242776 MEGF6O75095 1541 aa19.49■□□□□ 0.71
DDX39A-201ENST00000242776 COG3Q96JB2 828 aa19.48■□□□□ 0.71
DDX39A-201ENST00000242776 WWC3Q9ULE0 1092 aa19.48■□□□□ 0.71
DDX39A-201ENST00000242776 USP47Q96K76 1375 aa19.46■□□□□ 0.71
DDX39A-201ENST00000242776 ZNF526Q8TF50 670 aaPredicted RBP19.46■□□□□ 0.71
DDX39A-201ENST00000242776 C5P01031 1676 aa19.45■□□□□ 0.7
DDX39A-201ENST00000242776 GRIN3BO60391 1043 aa19.45■□□□□ 0.7
DDX39A-201ENST00000242776 RRS1Q15050 365 aaKnown RBP19.45■□□□□ 0.7
DDX39A-201ENST00000242776 NBPF6Q5VWK0 638 aa19.43■□□□□ 0.7
DDX39A-201ENST00000242776 NBPF4Q96M43 638 aa19.43■□□□□ 0.7
DDX39A-201ENST00000242776 ATP10DQ9P241 1426 aa19.43■□□□□ 0.7
DDX39A-201ENST00000242776 CEP350Q5VT06 3117 aa19.42■□□□□ 0.7
DDX39A-201ENST00000242776 TAF1LQ8IZX4 1826 aa19.42■□□□□ 0.7
DDX39A-201ENST00000242776 IFFO2Q5TF58 517 aa19.41■□□□□ 0.7
DDX39A-201ENST00000242776 SMIM5Q71RC9 77 aa19.41■□□□□ 0.7
DDX39A-201ENST00000242776 RAPGEF4Q8WZA2 1011 aa19.41■□□□□ 0.7
DDX39A-201ENST00000242776 MPRIPQ6WCQ1 1025 aa19.4■□□□□ 0.7
DDX39A-201ENST00000242776 GGNBP2Q9H3C7 697 aa19.4■□□□□ 0.7
DDX39A-201ENST00000242776 PHF14O94880 888 aa19.39■□□□□ 0.69
DDX39A-201ENST00000242776 GPBP1L1Q9HC44 474 aaPredicted RBP19.39■□□□□ 0.69
DDX39A-201ENST00000242776 TATP17735 454 aaPredicted RBP19.38■□□□□ 0.69
DDX39A-201ENST00000242776 ITGB4P16144 1822 aa19.37■□□□□ 0.69
DDX39A-201ENST00000242776 ST20-MTHFSA0A0A6YYL1 179 aa19.37■□□□□ 0.69
DDX39A-201ENST00000242776 PALLDQ8WX93 1383 aa19.37■□□□□ 0.69
DDX39A-201ENST00000242776 TONSLQ96HA7 1378 aa19.37■□□□□ 0.69
DDX39A-201ENST00000242776 SMG6Q86US8 1419 aaKnown RBP19.36■□□□□ 0.69
DDX39A-201ENST00000242776 AMIGO3Q86WK7 504 aa19.35■□□□□ 0.69
DDX39A-201ENST00000242776 C4BP0C0L5 1744 aa19.35■□□□□ 0.69
DDX39A-201ENST00000242776 TOGARAM1Q9Y4F4 1720 aa19.35■□□□□ 0.69
DDX39A-201ENST00000242776 HSP90AB2PQ58FF8 381 aa19.35■□□□□ 0.69
DDX39A-201ENST00000242776 AK7Q96M32 723 aa19.35■□□□□ 0.69
DDX39A-201ENST00000242776 TESK2Q96S53 571 aa19.35■□□□□ 0.69
DDX39A-201ENST00000242776 CD2APQ9Y5K6 639 aa19.35■□□□□ 0.69
DDX39A-201ENST00000242776 PUS7Q96PZ0 661 aaKnown RBP19.34■□□□□ 0.69
DDX39A-201ENST00000242776 RTL1A6NKG5 1358 aa19.33■□□□□ 0.69
DDX39A-201ENST00000242776 PCDH11XQ9BZA7 1347 aa19.33■□□□□ 0.69
DDX39A-201ENST00000242776 PCDH11YQ9BZA8 1340 aa19.33■□□□□ 0.69
DDX39A-201ENST00000242776 KIF20BQ96Q89 1820 aa19.32■□□□□ 0.68
DDX39A-201ENST00000242776 IGSF1Q8N6C5 1336 aa19.32■□□□□ 0.68
DDX39A-201ENST00000242776 UBR3Q6ZT12 1888 aa19.32■□□□□ 0.68
DDX39A-201ENST00000242776 FYB1O15117 783 aa19.32■□□□□ 0.68
DDX39A-201ENST00000242776 CGNL1Q0VF96 1302 aa19.31■□□□□ 0.68
DDX39A-201ENST00000242776 FLAD1Q8NFF5 587 aa19.31■□□□□ 0.68
DDX39A-201ENST00000242776 CYP27B1O15528 508 aa19.3■□□□□ 0.68
DDX39A-201ENST00000242776 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.28■□□□□ 0.68
DDX39A-201ENST00000242776 HSPA6P17066 643 aa19.28■□□□□ 0.68
DDX39A-201ENST00000242776 ADCY9O60503 1353 aa19.28■□□□□ 0.68
DDX39A-201ENST00000242776 PPM1GO15355 546 aaPredicted RBP19.28■□□□□ 0.68
DDX39A-201ENST00000242776 PIGBQ92521 554 aa19.28■□□□□ 0.68
DDX39A-201ENST00000242776 INSRP06213 1382 aa19.27■□□□□ 0.68
DDX39A-201ENST00000242776 LINC00116Q8NCU8 138 aa19.26■□□□□ 0.67
DDX39A-201ENST00000242776 SMARCC1Q92922 1105 aaPredicted RBP19.26■□□□□ 0.67
DDX39A-201ENST00000242776 FLT4P35916 1363 aa19.25■□□□□ 0.67
DDX39A-201ENST00000242776 PKD1L3Q7Z443 1732 aa19.25■□□□□ 0.67
DDX39A-201ENST00000242776 EMILIN1Q9Y6C2 1016 aa19.25■□□□□ 0.67
DDX39A-201ENST00000242776 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
DDX39A-201ENST00000242776 MAP2P11137 1827 aaKnown RBP19.23■□□□□ 0.67
DDX39A-201ENST00000242776 TMF1P82094 1093 aa19.23■□□□□ 0.67
DDX39A-201ENST00000242776 LOC102724428A0A0B4J2F2 783 aa19.22■□□□□ 0.67
DDX39A-201ENST00000242776 GNPATO15228 680 aa19.22■□□□□ 0.67
DDX39A-201ENST00000242776 SIK1P57059 783 aa19.22■□□□□ 0.67
DDX39A-201ENST00000242776 ASAP1Q9ULH1 1129 aa19.22■□□□□ 0.67
DDX39A-201ENST00000242776 KIF3CO14782 793 aa19.21■□□□□ 0.67
DDX39A-201ENST00000242776 ITPK1Q13572 414 aa19.21■□□□□ 0.67
DDX39A-201ENST00000242776 TMOD3Q9NYL9 352 aa19.21■□□□□ 0.67
DDX39A-201ENST00000242776 HMGB2P26583 209 aaKnown RBP19.2■□□□□ 0.66
DDX39A-201ENST00000242776 SSFA2P28290 1259 aa19.2■□□□□ 0.66
DDX39A-201ENST00000242776 ATP6V1AP38606 617 aa19.2■□□□□ 0.66
DDX39A-201ENST00000242776 SPG7Q9UQ90 795 aa19.2■□□□□ 0.66
DDX39A-201ENST00000242776 NSD3Q9BZ95 1437 aa19.2■□□□□ 0.66
DDX39A-201ENST00000242776 MMP10P09238 476 aa19.19■□□□□ 0.66
DDX39A-201ENST00000242776 CCER1Q8TC90 406 aaPredicted RBP19.19■□□□□ 0.66
DDX39A-201ENST00000242776 BCS1LQ9Y276 419 aa19.18■□□□□ 0.66
DDX39A-201ENST00000242776 CLSPNQ9HAW4 1339 aa19.17■□□□□ 0.66
DDX39A-201ENST00000242776 SLC24A1O60721 1099 aa19.17■□□□□ 0.66
DDX39A-201ENST00000242776 CARD14Q9BXL6 1004 aa19.17■□□□□ 0.66
DDX39A-201ENST00000242776 CICQ96RK0 1608 aaPredicted RBP19.17■□□□□ 0.66
DDX39A-201ENST00000242776 A0A0G2JLW4 131 aa19.16■□□□□ 0.66
DDX39A-201ENST00000242776 NKX1-1Q15270 411 aaPredicted RBP19.16■□□□□ 0.66
DDX39A-201ENST00000242776 EYA1Q99502 592 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms