RNA–Protein interactions for RNA: ENST00000239174.6

HOXB1-201, Transcript of homeobox B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB1, Length 2,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB1-201ENST00000239174 KLHL34Q8N239 644 aa21.61■■□□□ 1.05
HOXB1-201ENST00000239174 PRPF40AO75400 957 aaKnown RBP21.6■■□□□ 1.05
HOXB1-201ENST00000239174 XPCQ01831 940 aaPredicted RBP21.6■■□□□ 1.05
HOXB1-201ENST00000239174 ZDHHC9Q9Y397 364 aa21.6■■□□□ 1.05
HOXB1-201ENST00000239174 CASC1Q6TDU7 716 aa21.6■■□□□ 1.05
HOXB1-201ENST00000239174 NFE2L2Q16236 605 aa21.58■■□□□ 1.05
HOXB1-201ENST00000239174 FER1L4A9Z1Z3 1794 aa21.58■■□□□ 1.04
HOXB1-201ENST00000239174 REC8O95072 547 aa21.58■■□□□ 1.04
HOXB1-201ENST00000239174 MCM2P49736 904 aa21.58■■□□□ 1.04
HOXB1-201ENST00000239174 CABP2Q9NPB3 220 aa21.58■■□□□ 1.04
HOXB1-201ENST00000239174 TMEM63CQ9P1W3 806 aa21.58■■□□□ 1.04
HOXB1-201ENST00000239174 LRRC7Q96NW7 1537 aa21.57■■□□□ 1.04
HOXB1-201ENST00000239174 GGNBP2Q9H3C7 697 aa21.57■■□□□ 1.04
HOXB1-201ENST00000239174 RIMS2Q9UQ26 1411 aa21.57■■□□□ 1.04
HOXB1-201ENST00000239174 UTP14CQ5TAP6 766 aaKnown RBP21.56■■□□□ 1.04
HOXB1-201ENST00000239174 STK26Q9P289 416 aa21.56■■□□□ 1.04
HOXB1-201ENST00000239174 CD163L1Q9NR16 1453 aa21.56■■□□□ 1.04
HOXB1-201ENST00000239174 PKP1Q13835 747 aa21.55■■□□□ 1.04
HOXB1-201ENST00000239174 RPAP2Q8IXW5 612 aaPredicted RBP21.55■■□□□ 1.04
HOXB1-201ENST00000239174 PRIMPOLQ96LW4 560 aa21.55■■□□□ 1.04
HOXB1-201ENST00000239174 C1orf115Q9H7X2 142 aa21.55■■□□□ 1.04
HOXB1-201ENST00000239174 UVSSAQ2YD98 709 aa21.55■■□□□ 1.04
HOXB1-201ENST00000239174 ANKRD44Q8N8A2 993 aa21.55■■□□□ 1.04
HOXB1-201ENST00000239174 GTF2F1P35269 517 aaKnown RBP eCLIP21.54■■□□□ 1.04
HOXB1-201ENST00000239174 MYRIPQ8NFW9 859 aa21.54■■□□□ 1.04
HOXB1-201ENST00000239174 SYAP1Q96A49 352 aaPredicted RBP21.54■■□□□ 1.04
HOXB1-201ENST00000239174 CCDC94Q9BW85 323 aaPredicted RBP21.54■■□□□ 1.04
HOXB1-201ENST00000239174 C3P01024 1663 aa21.54■■□□□ 1.04
HOXB1-201ENST00000239174 KIAA2012Q0VF49 1180 aa21.53■■□□□ 1.04
HOXB1-201ENST00000239174 HMGN5P82970 282 aaKnown RBP21.53■■□□□ 1.04
HOXB1-201ENST00000239174 FAM184AQ8NB25 1140 aa21.53■■□□□ 1.04
HOXB1-201ENST00000239174 BRD1O95696 1058 aa21.52■■□□□ 1.04
HOXB1-201ENST00000239174 INTS4Q96HW7 963 aaKnown RBP21.52■■□□□ 1.04
HOXB1-201ENST00000239174 RBM27Q9P2N5 1060 aaKnown RBP21.52■■□□□ 1.04
HOXB1-201ENST00000239174 SYCE3A1L190 88 aa21.51■■□□□ 1.03
HOXB1-201ENST00000239174 CUL4AQ13619 759 aa21.51■■□□□ 1.03
HOXB1-201ENST00000239174 ZGPATQ8N5A5 531 aaKnown RBP21.51■■□□□ 1.03
HOXB1-201ENST00000239174 IL17RAQ96F46 866 aa21.51■■□□□ 1.03
HOXB1-201ENST00000239174 PHF14O94880 888 aa21.51■■□□□ 1.03
HOXB1-201ENST00000239174 PRKAR2BP31323 418 aa21.51■■□□□ 1.03
HOXB1-201ENST00000239174 LMOD3Q0VAK6 560 aa21.51■■□□□ 1.03
HOXB1-201ENST00000239174 TSPY26PQ9H489 355 aa21.51■■□□□ 1.03
HOXB1-201ENST00000239174 SDSP20132 328 aa21.5■■□□□ 1.03
HOXB1-201ENST00000239174 SAFB2Q14151 953 aaKnown RBP eCLIP21.5■■□□□ 1.03
HOXB1-201ENST00000239174 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.5■■□□□ 1.03
HOXB1-201ENST00000239174 OSBPL3Q9H4L5 887 aa21.5■■□□□ 1.03
HOXB1-201ENST00000239174 AK9Q5TCS8 1911 aa21.5■■□□□ 1.03
HOXB1-201ENST00000239174 CPSF1Q10570 1443 aaKnown RBP21.5■■□□□ 1.03
HOXB1-201ENST00000239174 KNDC1Q76NI1 1749 aa21.5■■□□□ 1.03
HOXB1-201ENST00000239174 ERC2O15083 957 aa21.5■■□□□ 1.03
HOXB1-201ENST00000239174 HAP1P54257 671 aaPredicted RBP21.5■■□□□ 1.03
HOXB1-201ENST00000239174 TWISTNBQ3B726 338 aaPredicted RBP21.5■■□□□ 1.03
HOXB1-201ENST00000239174 TSPYL6Q8N831 410 aa21.5■■□□□ 1.03
HOXB1-201ENST00000239174 ATP10DQ9P241 1426 aa21.49■■□□□ 1.03
HOXB1-201ENST00000239174 TMEM2Q9UHN6 1383 aa21.49■■□□□ 1.03
HOXB1-201ENST00000239174 HDGFP51858 240 aaKnown RBP21.49■■□□□ 1.03
HOXB1-201ENST00000239174 HDGFL2Q7Z4V5 671 aaPredicted RBP21.49■■□□□ 1.03
HOXB1-201ENST00000239174 LTKP29376 864 aa21.48■■□□□ 1.03
HOXB1-201ENST00000239174 MBIPQ9NS73 344 aa21.48■■□□□ 1.03
HOXB1-201ENST00000239174 RIMS1Q86UR5 1692 aaKnown RBP21.48■■□□□ 1.03
HOXB1-201ENST00000239174 SRPK2P78362 688 aaKnown RBP21.47■■□□□ 1.03
HOXB1-201ENST00000239174 TXNDC2Q86VQ3 553 aa21.47■■□□□ 1.03
HOXB1-201ENST00000239174 ANAPC15P60006 121 aa21.46■■□□□ 1.03
HOXB1-201ENST00000239174 PIBF1Q8WXW3 757 aa21.46■■□□□ 1.03
HOXB1-201ENST00000239174 PTPRMP28827 1452 aa21.46■■□□□ 1.03
HOXB1-201ENST00000239174 DMTNQ08495 405 aa21.45■■□□□ 1.02
HOXB1-201ENST00000239174 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.45■■□□□ 1.02
HOXB1-201ENST00000239174 KIF20BQ96Q89 1820 aa21.45■■□□□ 1.02
HOXB1-201ENST00000239174 TMX3Q96JJ7 454 aa21.45■■□□□ 1.02
HOXB1-201ENST00000239174 NSFL1CQ9UNZ2 370 aaKnown RBP21.45■■□□□ 1.02
HOXB1-201ENST00000239174 EPB41L2O43491 1005 aaKnown RBP21.44■■□□□ 1.02
HOXB1-201ENST00000239174 SPTLC3Q9NUV7 552 aa21.44■■□□□ 1.02
HOXB1-201ENST00000239174 POLKQ9UBT6 870 aa21.44■■□□□ 1.02
HOXB1-201ENST00000239174 CEP85Q6P2H3 762 aa21.43■■□□□ 1.02
HOXB1-201ENST00000239174 THEMISQ8N1K5 641 aaPredicted RBP21.43■■□□□ 1.02
HOXB1-201ENST00000239174 PHACTR3Q96KR7 559 aa21.43■■□□□ 1.02
HOXB1-201ENST00000239174 LETM1O95202 739 aaPredicted RBP21.43■■□□□ 1.02
HOXB1-201ENST00000239174 C16orf71Q8IYS4 520 aaPredicted RBP21.43■■□□□ 1.02
HOXB1-201ENST00000239174 TMEM87AQ8NBN3 555 aa21.43■■□□□ 1.02
HOXB1-201ENST00000239174 EID1Q9Y6B2 187 aa21.43■■□□□ 1.02
HOXB1-201ENST00000239174 UBR1Q8IWV7 1749 aa21.43■■□□□ 1.02
HOXB1-201ENST00000239174 ALKQ9UM73 1620 aa21.42■■□□□ 1.02
HOXB1-201ENST00000239174 PTMAP06454 111 aaKnown RBP21.42■■□□□ 1.02
HOXB1-201ENST00000239174 RTL1A6NKG5 1358 aa21.42■■□□□ 1.02
HOXB1-201ENST00000239174 C8orf58Q8NAV2 365 aa21.41■■□□□ 1.02
HOXB1-201ENST00000239174 ADAMTSL3P82987 1691 aa21.41■■□□□ 1.02
HOXB1-201ENST00000239174 PRAM1Q96QH2 718 aa21.41■■□□□ 1.02
HOXB1-201ENST00000239174 GTPBP4Q9BZE4 634 aaKnown RBP21.41■■□□□ 1.02
HOXB1-201ENST00000239174 YTHDC2Q9H6S0 1430 aaKnown RBP21.4■■□□□ 1.02
HOXB1-201ENST00000239174 RGS12O14924 1447 aa21.4■■□□□ 1.02
HOXB1-201ENST00000239174 SSH2Q76I76 1423 aa21.4■■□□□ 1.02
HOXB1-201ENST00000239174 SLC26A8Q96RN1 970 aa21.39■■□□□ 1.02
HOXB1-201ENST00000239174 PTPRCP08575 1304 aa21.39■■□□□ 1.02
HOXB1-201ENST00000239174 ZSCAN20P17040 1043 aaPredicted RBP21.39■■□□□ 1.01
HOXB1-201ENST00000239174 IL13P35225 146 aa21.39■■□□□ 1.01
HOXB1-201ENST00000239174 NOLC1Q14978 699 aaKnown RBP eCLIP21.39■■□□□ 1.01
HOXB1-201ENST00000239174 METP08581 1390 aa21.39■■□□□ 1.01
HOXB1-201ENST00000239174 ATP7BP35670 1465 aa21.38■■□□□ 1.01
HOXB1-201ENST00000239174 CDK12Q9NYV4 1490 aaPredicted RBP21.38■■□□□ 1.01
HOXB1-201ENST00000239174 MCCP23508 829 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms