RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 TRAK2O60296 914 aa18.19■□□□□ 0.5
CNOT3-201ENST00000221232 NLRP6P59044 892 aa18.19■□□□□ 0.5
CNOT3-201ENST00000221232 DCTPP1Q9H773 170 aa18.19■□□□□ 0.5
CNOT3-201ENST00000221232 ADAMTS13Q76LX8 1427 aa18.18■□□□□ 0.5
CNOT3-201ENST00000221232 ZBTB7CA1YPR0 619 aa18.18■□□□□ 0.5
CNOT3-201ENST00000221232 INTS3Q68E01 1043 aaKnown RBP18.18■□□□□ 0.5
CNOT3-201ENST00000221232 EYA1Q99502 592 aa18.18■□□□□ 0.5
CNOT3-201ENST00000221232 CEP85Q6P2H3 762 aa18.17■□□□□ 0.5
CNOT3-201ENST00000221232 CDC45O75419 566 aa18.16■□□□□ 0.5
CNOT3-201ENST00000221232 TSHZ3Q63HK5 1081 aa18.16■□□□□ 0.5
CNOT3-201ENST00000221232 MSH6P52701 1360 aa18.16■□□□□ 0.5
CNOT3-201ENST00000221232 ANKRD44Q8N8A2 993 aa18.16■□□□□ 0.5
CNOT3-201ENST00000221232 USHBP1Q8N6Y0 703 aa18.15■□□□□ 0.5
CNOT3-201ENST00000221232 USP6P35125 1406 aa18.15■□□□□ 0.5
CNOT3-201ENST00000221232 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
CNOT3-201ENST00000221232 TNPO1Q92973 898 aaKnown RBP18.15■□□□□ 0.5
CNOT3-201ENST00000221232 DLG5Q8TDM6 1919 aa18.14■□□□□ 0.49
CNOT3-201ENST00000221232 TTC22Q5TAA0 569 aa18.13■□□□□ 0.49
CNOT3-201ENST00000221232 TECPR2O15040 1411 aa18.13■□□□□ 0.49
CNOT3-201ENST00000221232 REREQ9P2R6 1566 aa18.13■□□□□ 0.49
CNOT3-201ENST00000221232 GAS2L2Q8NHY3 880 aa18.13■□□□□ 0.49
CNOT3-201ENST00000221232 SNX21Q969T3 373 aa18.13■□□□□ 0.49
CNOT3-201ENST00000221232 PANK2Q9BZ23 570 aa18.13■□□□□ 0.49
CNOT3-201ENST00000221232 EXOC6BQ9Y2D4 811 aa18.13■□□□□ 0.49
CNOT3-201ENST00000221232 GOLGA6L3A6NEY3 463 aa18.12■□□□□ 0.49
CNOT3-201ENST00000221232 SDSP20132 328 aa18.12■□□□□ 0.49
CNOT3-201ENST00000221232 RPAP2Q8IXW5 612 aaPredicted RBP18.12■□□□□ 0.49
CNOT3-201ENST00000221232 K7ELQ4 463 aaPredicted RBP18.11■□□□□ 0.49
CNOT3-201ENST00000221232 XRCC6P12956 609 aaKnown RBP eCLIP18.11■□□□□ 0.49
CNOT3-201ENST00000221232 ABTB2Q8N961 1025 aa18.11■□□□□ 0.49
CNOT3-201ENST00000221232 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.11■□□□□ 0.49
CNOT3-201ENST00000221232 RTL1A6NKG5 1358 aa18.11■□□□□ 0.49
CNOT3-201ENST00000221232 OVOS2A0A0J9YW53 1432 aa18.11■□□□□ 0.49
CNOT3-201ENST00000221232 OVOS2Q6IE36 1432 aa18.11■□□□□ 0.49
CNOT3-201ENST00000221232 FKBP5Q13451 457 aaPredicted RBP18.1■□□□□ 0.49
CNOT3-201ENST00000221232 HAP1P54257 671 aaPredicted RBP18.1■□□□□ 0.49
CNOT3-201ENST00000221232 UBE2Q2Q8WVN8 375 aa18.1■□□□□ 0.49
CNOT3-201ENST00000221232 RGS12O14924 1447 aa18.09■□□□□ 0.49
CNOT3-201ENST00000221232 KCNA6P17658 529 aa18.09■□□□□ 0.49
CNOT3-201ENST00000221232 SSFA2P28290 1259 aa18.09■□□□□ 0.49
CNOT3-201ENST00000221232 STK31Q9BXU1 1019 aa18.09■□□□□ 0.49
CNOT3-201ENST00000221232 CRB1P82279 1406 aa18.09■□□□□ 0.49
CNOT3-201ENST00000221232 PLEKHG1Q9ULL1 1385 aa18.09■□□□□ 0.49
CNOT3-201ENST00000221232 PTPRCP08575 1304 aa18.08■□□□□ 0.49
CNOT3-201ENST00000221232 C3P01024 1663 aa18.08■□□□□ 0.48
CNOT3-201ENST00000221232 DDIT3P35638 169 aa18.08■□□□□ 0.48
CNOT3-201ENST00000221232 L1TD1Q5T7N2 865 aaKnown RBP18.08■□□□□ 0.48
CNOT3-201ENST00000221232 MON2Q7Z3U7 1717 aa18.07■□□□□ 0.48
CNOT3-201ENST00000221232 USP26Q9BXU7 913 aa18.07■□□□□ 0.48
CNOT3-201ENST00000221232 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
CNOT3-201ENST00000221232 KIAA0232Q92628 1395 aa18.06■□□□□ 0.48
CNOT3-201ENST00000221232 EIF2S2P20042 333 aaKnown RBP18.05■□□□□ 0.48
CNOT3-201ENST00000221232 IL17REQ8NFR9 667 aa18.05■□□□□ 0.48
CNOT3-201ENST00000221232 FLT4P35916 1363 aa18.05■□□□□ 0.48
CNOT3-201ENST00000221232 KNDC1Q76NI1 1749 aa18.05■□□□□ 0.48
CNOT3-201ENST00000221232 FLIIQ13045 1269 aa18.05■□□□□ 0.48
CNOT3-201ENST00000221232 USP31Q70CQ4 1352 aa18.05■□□□□ 0.48
CNOT3-201ENST00000221232 ITSN1Q15811 1721 aa18.05■□□□□ 0.48
CNOT3-201ENST00000221232 PNMA6EA0A0J9YXQ4 647 aa18.05■□□□□ 0.48
CNOT3-201ENST00000221232 DDX11L8A8MPP1 907 aa18.05■□□□□ 0.48
CNOT3-201ENST00000221232 GNAT3A8MTJ3 354 aa18.05■□□□□ 0.48
CNOT3-201ENST00000221232 HOXC9P31274 260 aa18.05■□□□□ 0.48
CNOT3-201ENST00000221232 TBX22Q9Y458 520 aa18.05■□□□□ 0.48
CNOT3-201ENST00000221232 PEAK1Q9H792 1746 aa18.04■□□□□ 0.48
CNOT3-201ENST00000221232 RAB3GAP1Q15042 981 aa18.04■□□□□ 0.48
CNOT3-201ENST00000221232 TTC21AQ8NDW8 1320 aa18.04■□□□□ 0.48
CNOT3-201ENST00000221232 HMMRO75330 724 aa18.04■□□□□ 0.48
CNOT3-201ENST00000221232 SBNO1A3KN83 1393 aa18.03■□□□□ 0.48
CNOT3-201ENST00000221232 GNAI2P04899 355 aa18.03■□□□□ 0.48
CNOT3-201ENST00000221232 THEMISQ8N1K5 641 aaPredicted RBP18.03■□□□□ 0.48
CNOT3-201ENST00000221232 GBP4Q96PP9 640 aa18.03■□□□□ 0.48
CNOT3-201ENST00000221232 FOXD4L5Q5VV16 416 aaPredicted RBP18.03■□□□□ 0.48
CNOT3-201ENST00000221232 FOXD4L4Q8WXT5 416 aaPredicted RBP18.03■□□□□ 0.48
CNOT3-201ENST00000221232 RILPL2Q969X0 211 aa18.03■□□□□ 0.48
CNOT3-201ENST00000221232 RIMS1Q86UR5 1692 aaKnown RBP18.03■□□□□ 0.48
CNOT3-201ENST00000221232 KIF24Q5T7B8 1368 aa18.02■□□□□ 0.48
CNOT3-201ENST00000221232 AKAP12Q02952 1782 aa18.02■□□□□ 0.48
CNOT3-201ENST00000221232 CCT4P50991 539 aaKnown RBP18.02■□□□□ 0.48
CNOT3-201ENST00000221232 CASC1Q6TDU7 716 aa18.02■□□□□ 0.48
CNOT3-201ENST00000221232 NOL8Q76FK4 1167 aaKnown RBP18.02■□□□□ 0.48
CNOT3-201ENST00000221232 PHAXQ9H814 394 aaKnown RBP18.02■□□□□ 0.48
CNOT3-201ENST00000221232 UBR1Q8IWV7 1749 aa18.02■□□□□ 0.48
CNOT3-201ENST00000221232 PKP1Q13835 747 aa18.02■□□□□ 0.48
CNOT3-201ENST00000221232 CEP170BQ9Y4F5 1589 aaPredicted RBP18.02■□□□□ 0.48
CNOT3-201ENST00000221232 IGSF1Q8N6C5 1336 aa18.02■□□□□ 0.47
CNOT3-201ENST00000221232 ARHGEF10O15013 1369 aa18.02■□□□□ 0.47
CNOT3-201ENST00000221232 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
CNOT3-201ENST00000221232 PDE1AP54750 535 aa18.01■□□□□ 0.47
CNOT3-201ENST00000221232 LRRFIP2Q9Y608 721 aaKnown RBP18.01■□□□□ 0.47
CNOT3-201ENST00000221232 XPCQ01831 940 aaPredicted RBP18.01■□□□□ 0.47
CNOT3-201ENST00000221232 CCDC30Q5VVM6 783 aa18.01■□□□□ 0.47
CNOT3-201ENST00000221232 IL1RAPL2Q9NP60 686 aa18.01■□□□□ 0.47
CNOT3-201ENST00000221232 SSH2Q76I76 1423 aa18.01■□□□□ 0.47
CNOT3-201ENST00000221232 ANXA1P04083 346 aa18.01■□□□□ 0.47
CNOT3-201ENST00000221232 CHAMP1Q96JM3 812 aa18.01■□□□□ 0.47
CNOT3-201ENST00000221232 NCOA3Q9Y6Q9 1424 aa18■□□□□ 0.47
CNOT3-201ENST00000221232 FSD2A1L4K1 749 aa18■□□□□ 0.47
CNOT3-201ENST00000221232 NCLP19338 710 aaKnown RBP18■□□□□ 0.47
CNOT3-201ENST00000221232 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
CNOT3-201ENST00000221232 ZGPATQ8N5A5 531 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms