RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
PDZD4-201ENST00000164640 TRIM5Q9C035 493 aa18.12■□□□□ 0.49
PDZD4-201ENST00000164640 SMC3Q9UQE7 1217 aa18.12■□□□□ 0.49
PDZD4-201ENST00000164640 IL16Q14005 1332 aa18.11■□□□□ 0.49
PDZD4-201ENST00000164640 BRD1O95696 1058 aa18.11■□□□□ 0.49
PDZD4-201ENST00000164640 ZNF518AQ6AHZ1 1483 aa18.11■□□□□ 0.49
PDZD4-201ENST00000164640 KDM4AO75164 1064 aa18.11■□□□□ 0.49
PDZD4-201ENST00000164640 CCDC112Q8NEF3 446 aa18.1■□□□□ 0.49
PDZD4-201ENST00000164640 PTGS1P23219 599 aa18.1■□□□□ 0.49
PDZD4-201ENST00000164640 KRT24Q2M2I5 525 aa18.1■□□□□ 0.49
PDZD4-201ENST00000164640 UVSSAQ2YD98 709 aa18.1■□□□□ 0.49
PDZD4-201ENST00000164640 PALD1Q9ULE6 856 aa18.1■□□□□ 0.49
PDZD4-201ENST00000164640 FKBP5Q13451 457 aaPredicted RBP18.09■□□□□ 0.49
PDZD4-201ENST00000164640 NECTIN2Q92692 538 aa18.09■□□□□ 0.49
PDZD4-201ENST00000164640 MEIS3Q99687 375 aa18.09■□□□□ 0.49
PDZD4-201ENST00000164640 MYO5CQ9NQX4 1742 aa18.09■□□□□ 0.49
PDZD4-201ENST00000164640 FCHSD2O94868 740 aa18.09■□□□□ 0.49
PDZD4-201ENST00000164640 TNNT1P13805 278 aa18.08■□□□□ 0.49
PDZD4-201ENST00000164640 MX1P20591 662 aa18.08■□□□□ 0.49
PDZD4-201ENST00000164640 ZNF428Q96B54 188 aa18.08■□□□□ 0.48
PDZD4-201ENST00000164640 NOS1P29475 1434 aa18.08■□□□□ 0.48
PDZD4-201ENST00000164640 CD109Q6YHK3 1445 aa18.08■□□□□ 0.48
PDZD4-201ENST00000164640 NFE2L2Q16236 605 aa18.08■□□□□ 0.48
PDZD4-201ENST00000164640 DDX54Q8TDD1 881 aaKnown RBP18.08■□□□□ 0.48
PDZD4-201ENST00000164640 SRCIN1Q9C0H9 1055 aa18.08■□□□□ 0.48
PDZD4-201ENST00000164640 LAMC1P11047 1609 aa18.08■□□□□ 0.48
PDZD4-201ENST00000164640 CKAP2LQ8IYA6 745 aa18.07■□□□□ 0.48
PDZD4-201ENST00000164640 NAA30Q147X3 362 aaPredicted RBP18.07■□□□□ 0.48
PDZD4-201ENST00000164640 CCDC186Q7Z3E2 898 aa18.07■□□□□ 0.48
PDZD4-201ENST00000164640 RPAP2Q8IXW5 612 aaPredicted RBP18.07■□□□□ 0.48
PDZD4-201ENST00000164640 ATP6V1DQ9Y5K8 247 aa18.07■□□□□ 0.48
PDZD4-201ENST00000164640 SAMD9LQ8IVG5 1584 aa18.07■□□□□ 0.48
PDZD4-201ENST00000164640 FYB1O15117 783 aa18.07■□□□□ 0.48
PDZD4-201ENST00000164640 FERMT3Q86UX7 667 aa18.07■□□□□ 0.48
PDZD4-201ENST00000164640 ARHGAP45Q92619 1136 aa18.07■□□□□ 0.48
PDZD4-201ENST00000164640 CCDC192P0DO97 292 aa18.06■□□□□ 0.48
PDZD4-201ENST00000164640 RTF1Q92541 710 aaKnown RBP18.06■□□□□ 0.48
PDZD4-201ENST00000164640 NAP1L2Q9ULW6 460 aaPredicted RBP18.06■□□□□ 0.48
PDZD4-201ENST00000164640 F6X3S4 739 aa18.05■□□□□ 0.48
PDZD4-201ENST00000164640 ANKRD44Q8N8A2 993 aa18.05■□□□□ 0.48
PDZD4-201ENST00000164640 PDE1AP54750 535 aa18.05■□□□□ 0.48
PDZD4-201ENST00000164640 IQSEC2Q5JU85 1478 aa18.05■□□□□ 0.48
PDZD4-201ENST00000164640 FBXW7Q969H0 707 aa18.05■□□□□ 0.48
PDZD4-201ENST00000164640 IL1RAPL2Q9NP60 686 aa18.05■□□□□ 0.48
PDZD4-201ENST00000164640 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
PDZD4-201ENST00000164640 CEP85Q6P2H3 762 aa18.04■□□□□ 0.48
PDZD4-201ENST00000164640 LRMPQ12912 555 aa18.04■□□□□ 0.48
PDZD4-201ENST00000164640 CCDC66A2RUB6 948 aa18.04■□□□□ 0.48
PDZD4-201ENST00000164640 ARHGEF5Q12774 1597 aa18.04■□□□□ 0.48
PDZD4-201ENST00000164640 DUOX2Q9NRD8 1548 aa18.04■□□□□ 0.48
PDZD4-201ENST00000164640 TPM3P06753 285 aa18.03■□□□□ 0.48
PDZD4-201ENST00000164640 UBE2HP62256 183 aa18.03■□□□□ 0.48
PDZD4-201ENST00000164640 OGFRQ9NZT2 677 aa18.03■□□□□ 0.48
PDZD4-201ENST00000164640 CABP1Q9NZU7 370 aa18.03■□□□□ 0.48
PDZD4-201ENST00000164640 STAG3Q9UJ98 1225 aa18.03■□□□□ 0.48
PDZD4-201ENST00000164640 MAST1Q9Y2H9 1570 aa18.03■□□□□ 0.48
PDZD4-201ENST00000164640 ESYT1Q9BSJ8 1104 aa18.03■□□□□ 0.48
PDZD4-201ENST00000164640 MIS18AQ9NYP9 233 aa18.03■□□□□ 0.48
PDZD4-201ENST00000164640 MRC2Q9UBG0 1479 aa18.03■□□□□ 0.48
PDZD4-201ENST00000164640 DNM1Q05193 864 aaKnown RBP18.03■□□□□ 0.48
PDZD4-201ENST00000164640 CHMP4AQ9BY43 222 aa18.03■□□□□ 0.48
PDZD4-201ENST00000164640 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
PDZD4-201ENST00000164640 TAF3Q5VWG9 929 aa18.02■□□□□ 0.48
PDZD4-201ENST00000164640 LUZP1Q86V48 1076 aa18.02■□□□□ 0.48
PDZD4-201ENST00000164640 STX6O43752 255 aa18.02■□□□□ 0.48
PDZD4-201ENST00000164640 GTF2E1P29083 439 aaPredicted RBP18.02■□□□□ 0.48
PDZD4-201ENST00000164640 TNNT3P45378 269 aaPredicted RBP18.02■□□□□ 0.48
PDZD4-201ENST00000164640 LMOD3Q0VAK6 560 aa18.02■□□□□ 0.48
PDZD4-201ENST00000164640 CCDC83Q8IWF9 413 aa18.02■□□□□ 0.48
PDZD4-201ENST00000164640 KIAA1524Q8TCG1 905 aa18.02■□□□□ 0.48
PDZD4-201ENST00000164640 MADDQ8WXG6 1647 aa18.02■□□□□ 0.47
PDZD4-201ENST00000164640 EMILIN1Q9Y6C2 1016 aa18.02■□□□□ 0.47
PDZD4-201ENST00000164640 TRMT1Q9NXH9 659 aaKnown RBP18.01■□□□□ 0.47
PDZD4-201ENST00000164640 ATP10AO60312 1499 aa18.01■□□□□ 0.47
PDZD4-201ENST00000164640 TRAPPC8Q9Y2L5 1435 aa18.01■□□□□ 0.47
PDZD4-201ENST00000164640 FEZ1Q99689 392 aa18.01■□□□□ 0.47
PDZD4-201ENST00000164640 ANKRD36BQ8N2N9 1353 aa18.01■□□□□ 0.47
PDZD4-201ENST00000164640 ZSCAN22P10073 491 aaPredicted RBP18■□□□□ 0.47
PDZD4-201ENST00000164640 CPA1P15085 419 aa18■□□□□ 0.47
PDZD4-201ENST00000164640 OS9Q13438 667 aaPredicted RBP18■□□□□ 0.47
PDZD4-201ENST00000164640 C14orf93Q9H972 538 aaKnown RBP18■□□□□ 0.47
PDZD4-201ENST00000164640 ZSCAN21Q9Y5A6 473 aaPredicted RBP18■□□□□ 0.47
PDZD4-201ENST00000164640 TTC37Q6PGP7 1564 aa18■□□□□ 0.47
PDZD4-201ENST00000164640 BICD2Q8TD16 824 aa18■□□□□ 0.47
PDZD4-201ENST00000164640 LRRCC1Q9C099 1032 aa18■□□□□ 0.47
PDZD4-201ENST00000164640 NUTM1Q86Y26 1132 aa17.99■□□□□ 0.47
PDZD4-201ENST00000164640 PRAM1Q96QH2 718 aa17.99■□□□□ 0.47
PDZD4-201ENST00000164640 ABCC4O15439 1325 aa17.99■□□□□ 0.47
PDZD4-201ENST00000164640 GOLGA6L19H0YKK7 550 aa17.99■□□□□ 0.47
PDZD4-201ENST00000164640 FILIP1Q7Z7B0 1213 aa17.99■□□□□ 0.47
PDZD4-201ENST00000164640 UGGT1Q9NYU2 1555 aa17.99■□□□□ 0.47
PDZD4-201ENST00000164640 GTF2F1P35269 517 aaKnown RBP eCLIP17.99■□□□□ 0.47
PDZD4-201ENST00000164640 MCM10Q7L590 875 aa17.99■□□□□ 0.47
PDZD4-201ENST00000164640 TNMDQ9H2S6 317 aa17.99■□□□□ 0.47
PDZD4-201ENST00000164640 A0A1W2PP64 1363 aa17.98■□□□□ 0.47
PDZD4-201ENST00000164640 SYT1P21579 422 aa17.98■□□□□ 0.47
PDZD4-201ENST00000164640 RRS1Q15050 365 aaKnown RBP17.98■□□□□ 0.47
PDZD4-201ENST00000164640 NUP62CLQ9H1M0 184 aa17.98■□□□□ 0.47
PDZD4-201ENST00000164640 HAP1P54257 671 aaPredicted RBP17.98■□□□□ 0.47
PDZD4-201ENST00000164640 INTS4Q96HW7 963 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms