RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Gucy1a3Q9ERL9 691 aa21.32■■□□□ 1
Trim71-201ENSMUST00000111816 Ppp1r18Q8BQ30 594 aa21.32■■□□□ 1
Trim71-201ENSMUST00000111816 Noc2lQ9WV70 747 aaKnown RBP21.32■■□□□ 1
Trim71-201ENSMUST00000111816 Gle1Q8R322 699 aa21.32■■□□□ 1
Trim71-201ENSMUST00000111816 Dhx57Q6P5D3 1388 aaKnown RBP21.32■■□□□ 1
Trim71-201ENSMUST00000111816 Zmat2Q9CPW7 199 aa21.32■■□□□ 1
Trim71-201ENSMUST00000111816 Hsf2bpQ9D4G2 338 aa21.31■■□□□ 1
Trim71-201ENSMUST00000111816 Washc2Q6PGL7 1334 aa21.31■■□□□ 1
Trim71-201ENSMUST00000111816 Tmc1Q8R4P5 757 aa21.31■■□□□ 1
Trim71-201ENSMUST00000111816 Gm21680A0A0G2JGR8 267 aa21.31■■□□□ 1
Trim71-201ENSMUST00000111816 B4galnt4Q766D5 1034 aa21.31■■□□□ 1
Trim71-201ENSMUST00000111816 Fmnl3Q6ZPF4 1028 aa21.31■■□□□ 1
Trim71-201ENSMUST00000111816 Cdc45Q9Z1X9 566 aa21.31■■□□□ 1
Trim71-201ENSMUST00000111816 Mkrn1Q9QXP6 481 aa21.3■■□□□ 1
Trim71-201ENSMUST00000111816 Tnpo1Q8BFY9 898 aaKnown RBP21.3■■□□□ 1
Trim71-201ENSMUST00000111816 Akap2O54931 893 aa21.3■■□□□ 1
Trim71-201ENSMUST00000111816 Dync1i1O88485 628 aa21.3■■□□□ 1
Trim71-201ENSMUST00000111816 Knop1Q9Z2Q2 478 aaKnown RBP21.3■■□□□ 1
Trim71-201ENSMUST00000111816 Kcnh8P59111 1102 aa21.3■■□□□ 1
Trim71-201ENSMUST00000111816 Cecr2E9Q2Z1 1453 aa21.3■■□□□ 1
Trim71-201ENSMUST00000111816 Fam114a1Q9D281 569 aa21.3■■□□□ 1
Trim71-201ENSMUST00000111816 Sin3aQ60520 1274 aaKnown RBP21.29■■□□□ 1
Trim71-201ENSMUST00000111816 Rimbp2Q80U40 1072 aa21.29■■□□□ 1
Trim71-201ENSMUST00000111816 Nop53Q8BK35 484 aaKnown RBP21.29■■□□□ 1
Trim71-201ENSMUST00000111816 Pank3Q8R2W9 370 aa21.29■■□□□ 1
Trim71-201ENSMUST00000111816 Gcc1Q9D4H2 778 aa21.29■■□□□ 1
Trim71-201ENSMUST00000111816 Tmco5aQ9D9D5 303 aa21.29■■□□□ 1
Trim71-201ENSMUST00000111816 UacaQ8CGB3 1411 aa21.29■■□□□ 1
Trim71-201ENSMUST00000111816 Ctnna2Q61301 953 aa21.29■■□□□ 1
Trim71-201ENSMUST00000111816 Plcd3Q8K2J0 785 aa21.29■■□□□ 1
Trim71-201ENSMUST00000111816 Washc4Q3UMB9 1173 aa21.29■■□□□ 1
Trim71-201ENSMUST00000111816 Ift74Q8BKE9 600 aa21.28■■□□□ 1
Trim71-201ENSMUST00000111816 Cc2d1bQ8BRN9 848 aa21.28■■□□□ 1
Trim71-201ENSMUST00000111816 Syce3B5KM66 88 aa21.28■■□□□ 1
Trim71-201ENSMUST00000111816 Calml4Q91WQ9 153 aa21.28■■□□□ 1
Trim71-201ENSMUST00000111816 Krt84Q99M73 603 aa21.28■■□□□ 1
Trim71-201ENSMUST00000111816 Cbfa2t2O70374 594 aa21.28■■□□□ 1
Trim71-201ENSMUST00000111816 Ttll13A4Q9F6 804 aa21.28■■□□□ 1
Trim71-201ENSMUST00000111816 Stmn1P54227 149 aaKnown RBP21.28■■□□□ 1
Trim71-201ENSMUST00000111816 Usp16Q99LG0 825 aa21.28■■□□□ 1
Trim71-201ENSMUST00000111816 Ccdc172Q810N9 267 aa21.28■■□□□ 1
Trim71-201ENSMUST00000111816 SncbQ91ZZ3 133 aa21.28■■□□□ 1
Trim71-201ENSMUST00000111816 Tnip1Q9WUU8 647 aa21.27■■□□□ 1
Trim71-201ENSMUST00000111816 Stxbp4Q9WV89 557 aa21.27■■□□□ 1
Trim71-201ENSMUST00000111816 Zscan20B2KFW1 1030 aa21.27■■□□□ 1
Trim71-201ENSMUST00000111816 Cfdp1O88271 295 aaKnown RBP21.27■■□□□ 1
Trim71-201ENSMUST00000111816 Tsg101Q61187 391 aa21.27■■□□□ 1
Trim71-201ENSMUST00000111816 Tex2Q6ZPJ0 1128 aaKnown RBP21.27■■□□□ 1
Trim71-201ENSMUST00000111816 Krt7Q9DCV7 457 aa21.27■■□□□ 1
Trim71-201ENSMUST00000111816 Soga3Q6NZL0 945 aa21.27■□□□□ 0.99
Trim71-201ENSMUST00000111816 Rhot2Q8JZN7 620 aa21.27■□□□□ 0.99
Trim71-201ENSMUST00000111816 Stk3Q9JI10 497 aa21.26■□□□□ 0.99
Trim71-201ENSMUST00000111816 BcanQ61361 883 aa21.26■□□□□ 0.99
Trim71-201ENSMUST00000111816 Ssh1Q76I79 1042 aa21.26■□□□□ 0.99
Trim71-201ENSMUST00000111816 Nup88Q8CEC0 753 aaKnown RBP21.26■□□□□ 0.99
Trim71-201ENSMUST00000111816 Lrrc23O35125 340 aa21.26■□□□□ 0.99
Trim71-201ENSMUST00000111816 Rufy2Q8R4C2 606 aa21.26■□□□□ 0.99
Trim71-201ENSMUST00000111816 Ctnnbl1Q9CWL8 563 aaKnown RBP21.26■□□□□ 0.99
Trim71-201ENSMUST00000111816 Mphosph10Q810V0 681 aaKnown RBP21.25■□□□□ 0.99
Trim71-201ENSMUST00000111816 Usp47Q8BY87 1376 aa21.25■□□□□ 0.99
Trim71-201ENSMUST00000111816 Swap70Q6A028 585 aaKnown RBP21.25■□□□□ 0.99
Trim71-201ENSMUST00000111816 Brms1Q99N20 246 aa21.25■□□□□ 0.99
Trim71-201ENSMUST00000111816 Ccdc38Q8CDN8 563 aa21.25■□□□□ 0.99
Trim71-201ENSMUST00000111816 Utp14aQ640M1 767 aaKnown RBP21.25■□□□□ 0.99
Trim71-201ENSMUST00000111816 Gm21190A0A0G2JGJ6 266 aa21.25■□□□□ 0.99
Trim71-201ENSMUST00000111816 Sptbn5F6UCX4 1208 aa21.24■□□□□ 0.99
Trim71-201ENSMUST00000111816 ImpactO55091 318 aa21.24■□□□□ 0.99
Trim71-201ENSMUST00000111816 Mtus1Q5HZI1 1210 aa21.24■□□□□ 0.99
Trim71-201ENSMUST00000111816 TchpQ3TVW5 497 aa21.24■□□□□ 0.99
Trim71-201ENSMUST00000111816 Polr1aO35134 1717 aaKnown RBP21.24■□□□□ 0.99
Trim71-201ENSMUST00000111816 Ppp6r1Q7TSI3 856 aa21.24■□□□□ 0.99
Trim71-201ENSMUST00000111816 AdnpQ9Z103 1108 aaKnown RBP21.23■□□□□ 0.99
Trim71-201ENSMUST00000111816 Tubb4aQ9D6F9 444 aa21.23■□□□□ 0.99
Trim71-201ENSMUST00000111816 Sem1P60897 70 aa21.23■□□□□ 0.99
Trim71-201ENSMUST00000111816 Psmd1Q3TXS7 953 aa21.22■□□□□ 0.99
Trim71-201ENSMUST00000111816 Fsd1Q7TPM6 496 aa21.22■□□□□ 0.99
Trim71-201ENSMUST00000111816 Kif5cP28738 956 aaKnown RBP21.22■□□□□ 0.99
Trim71-201ENSMUST00000111816 Spa17Q62252 149 aa21.22■□□□□ 0.99
Trim71-201ENSMUST00000111816 Cep135Q6P5D4 1140 aa21.22■□□□□ 0.99
Trim71-201ENSMUST00000111816 Mybbp1aQ7TPV4 1344 aaKnown RBP21.22■□□□□ 0.99
Trim71-201ENSMUST00000111816 Fan1Q69ZT1 1020 aa21.22■□□□□ 0.99
Trim71-201ENSMUST00000111816 Rcan3Q9JKK0 239 aa21.21■□□□□ 0.99
Trim71-201ENSMUST00000111816 Myo6Q64331 1265 aa21.21■□□□□ 0.99
Trim71-201ENSMUST00000111816 Snw1Q9CSN1 536 aaKnown RBP21.21■□□□□ 0.99
Trim71-201ENSMUST00000111816 Taok3Q8BYC6 898 aa21.21■□□□□ 0.99
Trim71-201ENSMUST00000111816 Fermt1P59113 677 aa21.21■□□□□ 0.99
Trim71-201ENSMUST00000111816 Nucb2P81117 420 aa21.21■□□□□ 0.99
Trim71-201ENSMUST00000111816 Efcc1Q9JJF6 558 aa21.2■□□□□ 0.98
Trim71-201ENSMUST00000111816 Rad54l2Q99NG0 1466 aa21.2■□□□□ 0.98
Trim71-201ENSMUST00000111816 Serpinb6bO08804 377 aa21.2■□□□□ 0.98
Trim71-201ENSMUST00000111816 Dhx29Q6PGC1 1365 aaKnown RBP21.2■□□□□ 0.98
Trim71-201ENSMUST00000111816 Rbbp5Q8BX09 538 aaKnown RBP21.2■□□□□ 0.98
Trim71-201ENSMUST00000111816 Fermt2Q8CIB5 680 aa21.2■□□□□ 0.98
Trim71-201ENSMUST00000111816 Tspyl2Q7TQI8 677 aa21.19■□□□□ 0.98
Trim71-201ENSMUST00000111816 Slc38a10Q5I012 1090 aa21.19■□□□□ 0.98
Trim71-201ENSMUST00000111816 Ccdc150Q8CDI7 1110 aa21.19■□□□□ 0.98
Trim71-201ENSMUST00000111816 Ankrd1Q9CR42 319 aa21.19■□□□□ 0.98
Trim71-201ENSMUST00000111816 Ccdc114Q3UX62 658 aa21.19■□□□□ 0.98
Trim71-201ENSMUST00000111816 Chrna2Q91X60 512 aa21.19■□□□□ 0.98
Trim71-201ENSMUST00000111816 Trim11Q99PQ2 467 aa21.19■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms