RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Elp1Q7TT37 1333 aaKnown RBP16.29■□□□□ 0.2
Trim50-202ENSMUST00000111180 Col15a1O35206 1367 aa16.28■□□□□ 0.2
Trim50-202ENSMUST00000111180 Parp14Q2EMV9 1817 aa16.27■□□□□ 0.19
Trim50-202ENSMUST00000111180 En2P09066 324 aa16.27■□□□□ 0.19
Trim50-202ENSMUST00000111180 Uspl1Q3ULM6 1089 aa16.27■□□□□ 0.19
Trim50-202ENSMUST00000111180 Afg3l2Q8JZQ2 802 aaKnown RBP16.27■□□□□ 0.19
Trim50-202ENSMUST00000111180 PalmQ9Z0P4 383 aa16.27■□□□□ 0.19
Trim50-202ENSMUST00000111180 FocadA2AKG8 1798 aa16.27■□□□□ 0.19
Trim50-202ENSMUST00000111180 Gm21680A0A0G2JGR8 267 aa16.26■□□□□ 0.19
Trim50-202ENSMUST00000111180 Eif4a2P10630 407 aa16.26■□□□□ 0.19
Trim50-202ENSMUST00000111180 Tnnt3Q9QZ47 272 aa16.26■□□□□ 0.19
Trim50-202ENSMUST00000111180 Nsd3Q6P2L6 1439 aa16.26■□□□□ 0.19
Trim50-202ENSMUST00000111180 Zfp444Q3TDV8 331 aaKnown RBP16.25■□□□□ 0.19
Trim50-202ENSMUST00000111180 Ankrd13dQ6PD24 605 aa16.25■□□□□ 0.19
Trim50-202ENSMUST00000111180 CrbnQ8C7D2 445 aa16.25■□□□□ 0.19
Trim50-202ENSMUST00000111180 Uhrf1bp1B2KF50 1429 aa16.25■□□□□ 0.19
Trim50-202ENSMUST00000111180 Magea1O89006 320 aa16.24■□□□□ 0.19
Trim50-202ENSMUST00000111180 Magea5O89009 320 aa16.24■□□□□ 0.19
Trim50-202ENSMUST00000111180 Ralbp1Q62172 648 aa16.24■□□□□ 0.19
Trim50-202ENSMUST00000111180 Gpr150Q8BL07 427 aa16.24■□□□□ 0.19
Trim50-202ENSMUST00000111180 Magea2Q9R2A2 320 aa16.24■□□□□ 0.19
Trim50-202ENSMUST00000111180 Anks4bQ8K3X6 423 aa16.23■□□□□ 0.19
Trim50-202ENSMUST00000111180 Speer4bQ9D9F7 267 aa16.23■□□□□ 0.19
Trim50-202ENSMUST00000111180 Kdm6aO70546 1401 aa16.23■□□□□ 0.19
Trim50-202ENSMUST00000111180 Rad21Q61550 635 aaKnown RBP16.22■□□□□ 0.19
Trim50-202ENSMUST00000111180 Speer4f1Q9D5Q6 258 aa16.22■□□□□ 0.19
Trim50-202ENSMUST00000111180 Pnpla7A2AJ88 1352 aa16.22■□□□□ 0.19
Trim50-202ENSMUST00000111180 Cavin4A2AMM0 362 aa16.21■□□□□ 0.19
Trim50-202ENSMUST00000111180 Iqcf3Q9D498 203 aa16.2■□□□□ 0.18
Trim50-202ENSMUST00000111180 Trpm3Q5F4S9 1721 aa16.2■□□□□ 0.18
Trim50-202ENSMUST00000111180 Kif23E9Q5G3 953 aa16.19■□□□□ 0.18
Trim50-202ENSMUST00000111180 Apaf1O88879 1249 aa16.19■□□□□ 0.18
Trim50-202ENSMUST00000111180 4930572O03RikQ8C5Y0 211 aa16.19■□□□□ 0.18
Trim50-202ENSMUST00000111180 Tcerg1Q8CGF7 1100 aaKnown RBP16.19■□□□□ 0.18
Trim50-202ENSMUST00000111180 Rab11fip3Q8CHD8 1047 aa16.18■□□□□ 0.18
Trim50-202ENSMUST00000111180 Stk31Q99MW1 1018 aa16.18■□□□□ 0.18
Trim50-202ENSMUST00000111180 Upf2A2AT37 1269 aaKnown RBP16.17■□□□□ 0.18
Trim50-202ENSMUST00000111180 ThemisQ8BGW0 636 aa16.17■□□□□ 0.18
Trim50-202ENSMUST00000111180 MpripP97434 1024 aa16.16■□□□□ 0.18
Trim50-202ENSMUST00000111180 Q4VA45 678 aa16.16■□□□□ 0.18
Trim50-202ENSMUST00000111180 Arfgef2A2A5R2 1792 aa16.16■□□□□ 0.18
Trim50-202ENSMUST00000111180 Ccdc30Q8BVF4 654 aa16.16■□□□□ 0.18
Trim50-202ENSMUST00000111180 ApobrQ8VBT6 942 aa16.16■□□□□ 0.18
Trim50-202ENSMUST00000111180 Eya1P97767 591 aa16.15■□□□□ 0.18
Trim50-202ENSMUST00000111180 Ubxn2bQ0KL01 331 aa16.15■□□□□ 0.18
Trim50-202ENSMUST00000111180 Rps6ka4Q9Z2B9 773 aa16.15■□□□□ 0.18
Trim50-202ENSMUST00000111180 TnikP83510 1323 aa16.15■□□□□ 0.18
Trim50-202ENSMUST00000111180 Ttc41Q692V3 1318 aa16.15■□□□□ 0.18
Trim50-202ENSMUST00000111180 Kank1E9Q238 1360 aa16.14■□□□□ 0.17
Trim50-202ENSMUST00000111180 Plekhh1Q80TI1 1356 aa16.14■□□□□ 0.17
Trim50-202ENSMUST00000111180 Hmgb2P30681 210 aaKnown RBP16.14■□□□□ 0.17
Trim50-202ENSMUST00000111180 Ppp1r37Q8BKR5 712 aa16.14■□□□□ 0.17
Trim50-202ENSMUST00000111180 Klc3Q91W40 508 aa16.14■□□□□ 0.17
Trim50-202ENSMUST00000111180 Swt1Q9DBQ9 907 aa16.14■□□□□ 0.17
Trim50-202ENSMUST00000111180 Sos2Q02384 1333 aa16.14■□□□□ 0.17
Trim50-202ENSMUST00000111180 Eif5bQ05D44 1216 aaKnown RBP16.13■□□□□ 0.17
Trim50-202ENSMUST00000111180 Dusp27Q148W8 1138 aa16.13■□□□□ 0.17
Trim50-202ENSMUST00000111180 Gsdma3Q5Y4Y6 464 aa16.13■□□□□ 0.17
Trim50-202ENSMUST00000111180 Kiaa0319lQ8K135 1048 aa16.13■□□□□ 0.17
Trim50-202ENSMUST00000111180 Kcnq2Q9Z351 759 aa16.13■□□□□ 0.17
Trim50-202ENSMUST00000111180 Neurod2Q62414 383 aa16.12■□□□□ 0.17
Trim50-202ENSMUST00000111180 Larp1Q6ZQ58 1072 aaKnown RBP16.12■□□□□ 0.17
Trim50-202ENSMUST00000111180 Simc1E9Q6E9 1354 aa16.12■□□□□ 0.17
Trim50-202ENSMUST00000111180 Fam198bQ3UPI1 517 aa16.11■□□□□ 0.17
Trim50-202ENSMUST00000111180 Ahnak2E9PYB0 1738 aaKnown RBP16.11■□□□□ 0.17
Trim50-202ENSMUST00000111180 Chrna2Q91X60 512 aa16.1■□□□□ 0.17
Trim50-202ENSMUST00000111180 HypkQ9CR41 129 aa16.1■□□□□ 0.17
Trim50-202ENSMUST00000111180 Trpc5Q9QX29 975 aa16.1■□□□□ 0.17
Trim50-202ENSMUST00000111180 IncenpQ9WU62 880 aa16.1■□□□□ 0.17
Trim50-202ENSMUST00000111180 Kcna3P16390 528 aa16.1■□□□□ 0.17
Trim50-202ENSMUST00000111180 Mcm10Q0VBD2 885 aa16.1■□□□□ 0.17
Trim50-202ENSMUST00000111180 Ccnl1Q52KE7 532 aaKnown RBP16.1■□□□□ 0.17
Trim50-202ENSMUST00000111180 Abca3Q8R420 1704 aa16.09■□□□□ 0.17
Trim50-202ENSMUST00000111180 Gm21663A0A0G2JE01 267 aa16.09■□□□□ 0.17
Trim50-202ENSMUST00000111180 Gm7361D3Z6R1 267 aa16.09■□□□□ 0.17
Trim50-202ENSMUST00000111180 5031410I06RikE9Q4E0 267 aa16.09■□□□□ 0.17
Trim50-202ENSMUST00000111180 Gm1979E9QAN3 267 aa16.09■□□□□ 0.17
Trim50-202ENSMUST00000111180 Gm5862K7N5V5 267 aa16.09■□□□□ 0.17
Trim50-202ENSMUST00000111180 Gm10220K7N660 267 aa16.09■□□□□ 0.17
Trim50-202ENSMUST00000111180 Cabp2Q9JLK4 216 aa16.09■□□□□ 0.17
Trim50-202ENSMUST00000111180 Adgrb1Q3UHD1 1582 aa16.08■□□□□ 0.16
Trim50-202ENSMUST00000111180 Bicdl1A0JNT9 577 aa16.08■□□□□ 0.16
Trim50-202ENSMUST00000111180 Plin1Q8CGN5 517 aa16.08■□□□□ 0.16
Trim50-202ENSMUST00000111180 Akt1s1Q9D1F4 257 aa16.08■□□□□ 0.16
Trim50-202ENSMUST00000111180 Myo5bP21271 1818 aa16.07■□□□□ 0.16
Trim50-202ENSMUST00000111180 Ppm1fQ8CGA0 452 aa16.07■□□□□ 0.16
Trim50-202ENSMUST00000111180 Eif3bQ8JZQ9 803 aaKnown RBP16.07■□□□□ 0.16
Trim50-202ENSMUST00000111180 Ankrd50F7BE84 1390 aa16.05■□□□□ 0.16
Trim50-202ENSMUST00000111180 Ttc21aQ8C0S4 1314 aa16.05■□□□□ 0.16
Trim50-202ENSMUST00000111180 L3mbtl2P59178 703 aa16.05■□□□□ 0.16
Trim50-202ENSMUST00000111180 TmpoQ61033 693 aaKnown RBP16.05■□□□□ 0.16
Trim50-202ENSMUST00000111180 Atxn3Q9CVD2 355 aa16.05■□□□□ 0.16
Trim50-202ENSMUST00000111180 Slc5a1Q8C3K6 665 aa16.04■□□□□ 0.16
Trim50-202ENSMUST00000111180 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.03■□□□□ 0.16
Trim50-202ENSMUST00000111180 Jdp2P97875 163 aa16.03■□□□□ 0.16
Trim50-202ENSMUST00000111180 Amotl1Q9D4H4 968 aa16.03■□□□□ 0.16
Trim50-202ENSMUST00000111180 Sos1Q62245 1319 aa16.03■□□□□ 0.16
Trim50-202ENSMUST00000111180 Rtf1A2AQ19 715 aaKnown RBP16.03■□□□□ 0.16
Trim50-202ENSMUST00000111180 NudcO35685 332 aaKnown RBP16.03■□□□□ 0.16
Trim50-202ENSMUST00000111180 Egfem1Q8C088 590 aa16.03■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 319.3 ms