RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 MpripP97434 1024 aa14.42□□□□□ -0.1
Trim11-202ENSMUST00000108809 Rsph3aQ3UFY4 516 aa14.42□□□□□ -0.1
Trim11-202ENSMUST00000108809 Eif4g2Q62448 906 aaKnown RBP14.42□□□□□ -0.1
Trim11-202ENSMUST00000108809 HnrnpuQ8VEK3 800 aaKnown RBP14.42□□□□□ -0.1
Trim11-202ENSMUST00000108809 PzpQ61838 1495 aa14.42□□□□□ -0.1
Trim11-202ENSMUST00000108809 Parp14Q2EMV9 1817 aa14.42□□□□□ -0.1
Trim11-202ENSMUST00000108809 FanclQ9CR14 375 aa14.42□□□□□ -0.1
Trim11-202ENSMUST00000108809 PtprvP70289 1705 aa14.42□□□□□ -0.1
Trim11-202ENSMUST00000108809 Fam13aQ8BGI4 693 aa14.41□□□□□ -0.1
Trim11-202ENSMUST00000108809 Rims2Q9EQZ7 1530 aa14.4□□□□□ -0.1
Trim11-202ENSMUST00000108809 Mcm2P97310 904 aa14.4□□□□□ -0.1
Trim11-202ENSMUST00000108809 Phf14Q9D4H9 881 aa14.4□□□□□ -0.1
Trim11-202ENSMUST00000108809 Plin1Q8CGN5 517 aa14.4□□□□□ -0.1
Trim11-202ENSMUST00000108809 Ppp6r3Q922D4 844 aa14.4□□□□□ -0.1
Trim11-202ENSMUST00000108809 Als2Q920R0 1651 aa14.4□□□□□ -0.1
Trim11-202ENSMUST00000108809 Abcc10Q8R4P9 1501 aa14.39□□□□□ -0.11
Trim11-202ENSMUST00000108809 C5P06684 1680 aa14.39□□□□□ -0.11
Trim11-202ENSMUST00000108809 GorabQ8BRM2 368 aa14.39□□□□□ -0.11
Trim11-202ENSMUST00000108809 Dnttip2Q8R2M2 758 aaKnown RBP14.39□□□□□ -0.11
Trim11-202ENSMUST00000108809 HnrnpmQ9D0E1 729 aaKnown RBP14.39□□□□□ -0.11
Trim11-202ENSMUST00000108809 Triml2E9PW10 424 aa14.39□□□□□ -0.11
Trim11-202ENSMUST00000108809 1700010I14RikQ7TPG0 532 aa14.39□□□□□ -0.11
Trim11-202ENSMUST00000108809 Ccdc146E9Q9F7 977 aa14.38□□□□□ -0.11
Trim11-202ENSMUST00000108809 Il4rP16382 810 aa14.38□□□□□ -0.11
Trim11-202ENSMUST00000108809 Pdcl3Q8BVF2 240 aa14.38□□□□□ -0.11
Trim11-202ENSMUST00000108809 Msh6P54276 1358 aaKnown RBP14.38□□□□□ -0.11
Trim11-202ENSMUST00000108809 Kif20aP97329 887 aa14.38□□□□□ -0.11
Trim11-202ENSMUST00000108809 Nucb1Q02819 459 aaKnown RBP14.37□□□□□ -0.11
Trim11-202ENSMUST00000108809 Dmrtc1Q9D9R7 182 aa14.37□□□□□ -0.11
Trim11-202ENSMUST00000108809 TmpoQ61033 693 aaKnown RBP14.37□□□□□ -0.11
Trim11-202ENSMUST00000108809 Pdia3P27773 505 aaKnown RBP14.37□□□□□ -0.11
Trim11-202ENSMUST00000108809 Ppip5k2Q6ZQB6 1129 aa14.37□□□□□ -0.11
Trim11-202ENSMUST00000108809 Prkar2bP31324 416 aa14.36□□□□□ -0.11
Trim11-202ENSMUST00000108809 Isy1Q69ZQ2 285 aaKnown RBP14.36□□□□□ -0.11
Trim11-202ENSMUST00000108809 Plcb2A3KGF7 1181 aa14.36□□□□□ -0.11
Trim11-202ENSMUST00000108809 AU015836B2RUM3 263 aa14.36□□□□□ -0.11
Trim11-202ENSMUST00000108809 Plppr3Q7TPB0 716 aa14.36□□□□□ -0.11
Trim11-202ENSMUST00000108809 Frmpd2A0A140LI67 1392 aa14.36□□□□□ -0.11
Trim11-202ENSMUST00000108809 Atg4a-psA0A0G2JFS9 396 aa14.35□□□□□ -0.11
Trim11-202ENSMUST00000108809 Q3UJC8 639 aa14.35□□□□□ -0.11
Trim11-202ENSMUST00000108809 Atg4aQ8C9S8 396 aa14.35□□□□□ -0.11
Trim11-202ENSMUST00000108809 Myo5bP21271 1818 aa14.35□□□□□ -0.11
Trim11-202ENSMUST00000108809 Rnf123Q5XPI3 1314 aa14.35□□□□□ -0.11
Trim11-202ENSMUST00000108809 Elp1Q7TT37 1333 aaKnown RBP14.35□□□□□ -0.11
Trim11-202ENSMUST00000108809 FancaQ9JL70 1439 aa14.35□□□□□ -0.11
Trim11-202ENSMUST00000108809 Znf692Q3U381 531 aa14.35□□□□□ -0.11
Trim11-202ENSMUST00000108809 Smarca5Q91ZW3 1051 aaKnown RBP14.35□□□□□ -0.11
Trim11-202ENSMUST00000108809 Ahnak2E9PYB0 1738 aaKnown RBP14.34□□□□□ -0.11
Trim11-202ENSMUST00000108809 Igsf1Q7TQA1 1317 aa14.34□□□□□ -0.11
Trim11-202ENSMUST00000108809 Prim1P20664 417 aa14.33□□□□□ -0.11
Trim11-202ENSMUST00000108809 Ggnbp2Q5SV77 696 aa14.33□□□□□ -0.12
Trim11-202ENSMUST00000108809 Arfgef2A2A5R2 1792 aa14.32□□□□□ -0.12
Trim11-202ENSMUST00000108809 Casq1O09165 405 aa14.32□□□□□ -0.12
Trim11-202ENSMUST00000108809 Bloc1s4Q8VED2 215 aa14.32□□□□□ -0.12
Trim11-202ENSMUST00000108809 1700019A02RikA0A087WPV9 146 aa14.31□□□□□ -0.12
Trim11-202ENSMUST00000108809 Bag4Q8CI61 457 aa14.3□□□□□ -0.12
Trim11-202ENSMUST00000108809 Snap23O09044 210 aa14.3□□□□□ -0.12
Trim11-202ENSMUST00000108809 Dnajc5gQ8C632 165 aa14.3□□□□□ -0.12
Trim11-202ENSMUST00000108809 Cyp46a1Q9WVK8 500 aa14.3□□□□□ -0.12
Trim11-202ENSMUST00000108809 Pibf1E9Q6K3 756 aa14.29□□□□□ -0.12
Trim11-202ENSMUST00000108809 Eya1P97767 591 aa14.29□□□□□ -0.12
Trim11-202ENSMUST00000108809 Gtf2a1Q99PM3 378 aa14.29□□□□□ -0.12
Trim11-202ENSMUST00000108809 Ap3b2Q9JME5 1082 aa14.29□□□□□ -0.12
Trim11-202ENSMUST00000108809 Sv2bQ8BG39 683 aa14.29□□□□□ -0.12
Trim11-202ENSMUST00000108809 Cyp27a1Q9DBG1 533 aa14.29□□□□□ -0.12
Trim11-202ENSMUST00000108809 Nlgn1Q99K10 843 aa14.29□□□□□ -0.12
Trim11-202ENSMUST00000108809 ScaperF8VQ70 1398 aaKnown RBP14.28□□□□□ -0.12
Trim11-202ENSMUST00000108809 Zfp777B9EKF4 885 aa14.28□□□□□ -0.12
Trim11-202ENSMUST00000108809 Foxp4Q9DBY0 795 aaKnown RBP14.28□□□□□ -0.12
Trim11-202ENSMUST00000108809 Rtn4Q99P72 1162 aaKnown RBP14.28□□□□□ -0.12
Trim11-202ENSMUST00000108809 Idi1P58044 227 aa14.27□□□□□ -0.13
Trim11-202ENSMUST00000108809 Dennd6aQ8BH65 605 aa14.27□□□□□ -0.13
Trim11-202ENSMUST00000108809 Mrps27Q8BK72 415 aaKnown RBP14.27□□□□□ -0.13
Trim11-202ENSMUST00000108809 Tmx3Q8BXZ1 456 aa14.27□□□□□ -0.13
Trim11-202ENSMUST00000108809 Pnpla7A2AJ88 1352 aa14.27□□□□□ -0.13
Trim11-202ENSMUST00000108809 Nckap5lQ6GQX2 1323 aa14.27□□□□□ -0.13
Trim11-202ENSMUST00000108809 Fam83gQ5SWY7 812 aa14.27□□□□□ -0.13
Trim11-202ENSMUST00000108809 Zkscan1Q8BGS3 561 aaKnown RBP14.27□□□□□ -0.13
Trim11-202ENSMUST00000108809 Rtf1A2AQ19 715 aaKnown RBP14.26□□□□□ -0.13
Trim11-202ENSMUST00000108809 Dlg5E9Q9R9 1921 aa14.26□□□□□ -0.13
Trim11-202ENSMUST00000108809 Rad17Q6NXW6 688 aa14.26□□□□□ -0.13
Trim11-202ENSMUST00000108809 Erc2Q6PH08 957 aa14.26□□□□□ -0.13
Trim11-202ENSMUST00000108809 Stk11ipQ3TAA7 1072 aa14.25□□□□□ -0.13
Trim11-202ENSMUST00000108809 Bcar3Q9QZK2 820 aa14.25□□□□□ -0.13
Trim11-202ENSMUST00000108809 Robo1O89026 1612 aa14.25□□□□□ -0.13
Trim11-202ENSMUST00000108809 Zkscan16A2ALW2 728 aa14.25□□□□□ -0.13
Trim11-202ENSMUST00000108809 Rasa1E9PYG6 1038 aa14.25□□□□□ -0.13
Trim11-202ENSMUST00000108809 Gnai2P08752 355 aaKnown RBP14.25□□□□□ -0.13
Trim11-202ENSMUST00000108809 Zdhhc9P59268 364 aa14.25□□□□□ -0.13
Trim11-202ENSMUST00000108809 Lmtk3Q5XJV6 1424 aa14.25□□□□□ -0.13
Trim11-202ENSMUST00000108809 Mmp8O70138 465 aa14.24□□□□□ -0.13
Trim11-202ENSMUST00000108809 Nol8Q3UHX0 1147 aaKnown RBP14.24□□□□□ -0.13
Trim11-202ENSMUST00000108809 NgefQ8CHT1 710 aa14.24□□□□□ -0.13
Trim11-202ENSMUST00000108809 Q9D2X8 372 aa14.24□□□□□ -0.13
Trim11-202ENSMUST00000108809 Alpk3Q924C5 1678 aa14.24□□□□□ -0.13
Trim11-202ENSMUST00000108809 Stk36Q69ZM6 1316 aa14.24□□□□□ -0.13
Trim11-202ENSMUST00000108809 Atf5O70191 283 aa14.24□□□□□ -0.13
Trim11-202ENSMUST00000108809 RestQ8VIG1 1082 aa14.24□□□□□ -0.13
Trim11-202ENSMUST00000108809 DekQ7TNV0 380 aaKnown RBP14.23□□□□□ -0.13
Trim11-202ENSMUST00000108809 Nphp1Q9QY53 687 aa14.23□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms