RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Ciz1Q8VEH2 845 aa40.1■■■■■ 4.01
Ctdnep1-201ENSMUST00000108593 Pcgf6Q99NA9 353 aa40.1■■■■■ 4.01
Ctdnep1-201ENSMUST00000108593 Phkg2Q9DB30 406 aa40.09■■■■■ 4.01
Ctdnep1-201ENSMUST00000108593 Aox2Q5SGK3 1345 aa40.08■■■■■ 4.01
Ctdnep1-201ENSMUST00000108593 MpndQ3TV65 487 aa40.05■■■■■ 4
Ctdnep1-201ENSMUST00000108593 Ppp6r1Q7TSI3 856 aa40.05■■■■■ 4
Ctdnep1-201ENSMUST00000108593 Larp1Q6ZQ58 1072 aaKnown RBP40.05■■■■■ 4
Ctdnep1-201ENSMUST00000108593 Pdzd9Q9D9M4 266 aa40.05■■■■■ 4
Ctdnep1-201ENSMUST00000108593 Ssfa2Q922B9 1252 aa40.03■■■■■ 4
Ctdnep1-201ENSMUST00000108593 Stra8P70278 393 aa40.02■■■■■ 4
Ctdnep1-201ENSMUST00000108593 Swt1Q9DBQ9 907 aa40.02■■■■■ 4
Ctdnep1-201ENSMUST00000108593 Ncbp3Q8BZR9 615 aaKnown RBP40.02■■■■■ 4
Ctdnep1-201ENSMUST00000108593 Ly75Q60767 1723 aa40■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Dusp27Q148W8 1138 aa40■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Sugp2Q8CH09 1067 aa40■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Chmp7Q8R1T1 451 aa40■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Uhrf1bp1B2KF50 1429 aa39.99■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 GakQ99KY4 1305 aa39.99■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Rtf1A2AQ19 715 aaKnown RBP39.99■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Kiaa0319Q5SZV5 1081 aa39.98■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Zcrb1Q9CZ96 217 aaKnown RBP39.98■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Asic4Q7TNS7 539 aa39.98■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Gm21663A0A0G2JE01 267 aa39.97■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Gm7361D3Z6R1 267 aa39.97■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 5031410I06RikE9Q4E0 267 aa39.97■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Gm1979E9QAN3 267 aa39.97■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Gm5862K7N5V5 267 aa39.97■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Gm10220K7N660 267 aa39.97■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Slc5a1Q8C3K6 665 aa39.97■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 Snap23O09044 210 aa39.94■■■■□ 3.99
Ctdnep1-201ENSMUST00000108593 CrbnQ8C7D2 445 aa39.94■■■■□ 3.98
Ctdnep1-201ENSMUST00000108593 Abcc12Q80WJ6 1366 aa39.93■■■■□ 3.98
Ctdnep1-201ENSMUST00000108593 Lrit1Q8K099 624 aa39.88■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 ApobrQ8VBT6 942 aa39.88■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 PappaQ8R4K8 1624 aa39.88■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 Sos1Q62245 1319 aa39.88■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 Col22a1E9Q7P1 1613 aa39.87■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 Ppfibp2O35711 882 aa39.86■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 Ubap1lG3UW59 384 aa39.85■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 Speer4f1Q9D5Q6 258 aa39.84■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 Bsdc1Q80Y55 427 aa39.83■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 Rgs17Q9QZB0 210 aa39.83■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 Nkx2-3P97334 362 aa39.83■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 Ccnl1Q52KE7 532 aaKnown RBP39.83■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 Ralbp1Q62172 648 aa39.83■■■■□ 3.97
Ctdnep1-201ENSMUST00000108593 Nop58Q6DFW4 536 aaKnown RBP39.8■■■■□ 3.96
Ctdnep1-201ENSMUST00000108593 Nsd3Q6P2L6 1439 aa39.79■■■■□ 3.96
Ctdnep1-201ENSMUST00000108593 Crb1Q8VHS2 1405 aa39.79■■■■□ 3.96
Ctdnep1-201ENSMUST00000108593 GalcP54818 684 aa39.78■■■■□ 3.96
Ctdnep1-201ENSMUST00000108593 Ints5Q8CHT3 1018 aa39.78■■■■□ 3.96
Ctdnep1-201ENSMUST00000108593 Afg3l2Q8JZQ2 802 aaKnown RBP39.78■■■■□ 3.96
Ctdnep1-201ENSMUST00000108593 Pnpla7A2AJ88 1352 aa39.78■■■■□ 3.96
Ctdnep1-201ENSMUST00000108593 Rad21Q61550 635 aaKnown RBP39.76■■■■□ 3.96
Ctdnep1-201ENSMUST00000108593 Rps6ka4Q9Z2B9 773 aa39.76■■■■□ 3.96
Ctdnep1-201ENSMUST00000108593 Ccdc155Q80VJ8 648 aa39.76■■■■□ 3.95
Ctdnep1-201ENSMUST00000108593 Neurod2Q62414 383 aa39.75■■■■□ 3.95
Ctdnep1-201ENSMUST00000108593 Atxn3Q9CVD2 355 aa39.73■■■■□ 3.95
Ctdnep1-201ENSMUST00000108593 Ccdc6D3YZP9 469 aa39.72■■■■□ 3.95
Ctdnep1-201ENSMUST00000108593 Arhgap33Q80YF9 1305 aa39.71■■■■□ 3.95
Ctdnep1-201ENSMUST00000108593 Ubr2Q6WKZ8 1755 aa39.71■■■■□ 3.95
Ctdnep1-201ENSMUST00000108593 Myo5bP21271 1818 aa39.7■■■■□ 3.95
Ctdnep1-201ENSMUST00000108593 Prim1P20664 417 aa39.69■■■■□ 3.94
Ctdnep1-201ENSMUST00000108593 Ggnbp2Q5SV77 696 aa39.69■■■■□ 3.94
Ctdnep1-201ENSMUST00000108593 Hdac6Q9Z2V5 1149 aa39.69■■■■□ 3.94
Ctdnep1-201ENSMUST00000108593 Sos2Q02384 1333 aa39.68■■■■□ 3.94
Ctdnep1-201ENSMUST00000108593 Btbd11Q6GQW0 1109 aa39.66■■■■□ 3.94
Ctdnep1-201ENSMUST00000108593 Tjp1P39447 1745 aaKnown RBP39.66■■■■□ 3.94
Ctdnep1-201ENSMUST00000108593 Zfp444Q3TDV8 331 aaKnown RBP39.65■■■■□ 3.94
Ctdnep1-201ENSMUST00000108593 Gnai1B2RSH2 354 aa39.65■■■■□ 3.94
Ctdnep1-201ENSMUST00000108593 Gnai3Q9DC51 354 aa39.65■■■■□ 3.94
Ctdnep1-201ENSMUST00000108593 Anks4bQ8K3X6 423 aa39.64■■■■□ 3.94
Ctdnep1-201ENSMUST00000108593 Vars2Q3U2A8 1060 aa39.63■■■■□ 3.93
Ctdnep1-201ENSMUST00000108593 Ofd1Q80Z25 1017 aa39.63■■■■□ 3.93
Ctdnep1-201ENSMUST00000108593 Klc3Q91W40 508 aa39.63■■■■□ 3.93
Ctdnep1-201ENSMUST00000108593 Adamtsl1Q8BLI0 1745 aa39.62■■■■□ 3.93
Ctdnep1-201ENSMUST00000108593 Ccdc30Q8BVF4 654 aa39.61■■■■□ 3.93
Ctdnep1-201ENSMUST00000108593 Shank3Q4ACU6 1730 aa39.59■■■■□ 3.93
Ctdnep1-201ENSMUST00000108593 Atg3Q9CPX6 314 aa39.58■■■■□ 3.93
Ctdnep1-201ENSMUST00000108593 Abca3Q8R420 1704 aa39.57■■■■□ 3.93
Ctdnep1-201ENSMUST00000108593 Erbb3Q61526 1339 aa39.57■■■■□ 3.93
Ctdnep1-201ENSMUST00000108593 Foxp4Q9DBY0 795 aaKnown RBP39.57■■■■□ 3.92
Ctdnep1-201ENSMUST00000108593 Jmjd4Q8BFT6 427 aa39.56■■■■□ 3.92
Ctdnep1-201ENSMUST00000108593 Kiaa0319lQ8K135 1048 aa39.56■■■■□ 3.92
Ctdnep1-201ENSMUST00000108593 Klhdc4Q921I2 584 aa39.56■■■■□ 3.92
Ctdnep1-201ENSMUST00000108593 Cdc37l1Q9CZP7 335 aa39.56■■■■□ 3.92
Ctdnep1-201ENSMUST00000108593 AceP09470 1312 aa39.55■■■■□ 3.92
Ctdnep1-201ENSMUST00000108593 Ttc21aQ8C0S4 1314 aa39.55■■■■□ 3.92
Ctdnep1-201ENSMUST00000108593 Ankrd50F7BE84 1390 aa39.54■■■■□ 3.92
Ctdnep1-201ENSMUST00000108593 Efcab2Q9CQ46 164 aa39.54■■■■□ 3.92
Ctdnep1-201ENSMUST00000108593 U2surpQ6NV83 1029 aaKnown RBP39.52■■■■□ 3.92
Ctdnep1-201ENSMUST00000108593 Snapc4Q8BP86 1333 aa39.5■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 Cap2Q9CYT6 476 aa39.5■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 Rbm25B2RY56 838 aaKnown RBP39.49■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 Dcaf5Q80T85 946 aa39.49■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 Usp16Q99LG0 825 aa39.49■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 Smg7Q5RJH6 1138 aaKnown RBP39.48■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 Hmgb2P30681 210 aaKnown RBP39.47■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 Eif4a1P60843 406 aaKnown RBP39.47■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 Senp3Q9EP97 568 aaKnown RBP39.47■■■■□ 3.91
Ctdnep1-201ENSMUST00000108593 NudcO35685 332 aaKnown RBP39.47■■■■□ 3.91
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms