RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Nwd2Q6P5U7 1742 aa29.39■■■□□ 2.3
Scn1b-201ENSMUST00000098548 Ankrd23Q812A3 306 aa29.39■■■□□ 2.29
Scn1b-201ENSMUST00000098548 4930572O03RikQ8C5Y0 211 aa29.39■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Iqcf3Q9D498 203 aa29.39■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Amotl1Q9D4H4 968 aa29.39■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Mbd3Q9Z2D8 285 aaKnown RBP29.39■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Snap23O09044 210 aa29.37■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Sik1Q60670 779 aa29.37■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Speer4bQ9D9F7 267 aa29.37■■■□□ 2.29
Scn1b-201ENSMUST00000098548 NeflP08551 543 aa29.36■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Rab11fip3Q8CHD8 1047 aa29.36■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Trpm3Q5F4S9 1721 aa29.36■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Gm21680A0A0G2JGR8 267 aa29.35■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Cavin4A2AMM0 362 aa29.35■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Dusp27Q148W8 1138 aa29.35■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Ginm1Q91WR6 327 aa29.34■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Kcnh4A2A5F7 1018 aa29.33■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Larp1Q6ZQ58 1072 aaKnown RBP29.33■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Rwdd1Q9CQK7 243 aa29.33■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Erbb3Q61526 1339 aa29.33■■■□□ 2.29
Scn1b-201ENSMUST00000098548 Tns2Q8CGB6 1400 aa29.33■■■□□ 2.29
Scn1b-201ENSMUST00000098548 CenpbP27790 599 aa29.31■■■□□ 2.28
Scn1b-201ENSMUST00000098548 Aox2Q5SGK3 1345 aa29.31■■■□□ 2.28
Scn1b-201ENSMUST00000098548 Mst1rQ62190 1378 aa29.31■■■□□ 2.28
Scn1b-201ENSMUST00000098548 Exoc5Q3TPX4 708 aa29.3■■■□□ 2.28
Scn1b-201ENSMUST00000098548 Ddb1Q3U1J4 1140 aaKnown RBP29.3■■■□□ 2.28
Scn1b-201ENSMUST00000098548 Vps33bP59016 617 aa29.29■■■□□ 2.28
Scn1b-201ENSMUST00000098548 Neurod2Q62414 383 aa29.29■■■□□ 2.28
Scn1b-201ENSMUST00000098548 Pdzd9Q9D9M4 266 aa29.29■■■□□ 2.28
Scn1b-201ENSMUST00000098548 Swt1Q9DBQ9 907 aa29.28■■■□□ 2.28
Scn1b-201ENSMUST00000098548 Uhrf1bp1B2KF50 1429 aa29.28■■■□□ 2.28
Scn1b-201ENSMUST00000098548 Elp1Q7TT37 1333 aaKnown RBP29.27■■■□□ 2.28
Scn1b-201ENSMUST00000098548 1700123L14RikQ3V2K7 440 aa29.26■■■□□ 2.28
Scn1b-201ENSMUST00000098548 Phkg2Q9DB30 406 aa29.26■■■□□ 2.28
Scn1b-201ENSMUST00000098548 SafbD3YXK2 937 aaKnown RBP29.26■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Nkx2-3P97334 362 aa29.26■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Taok3Q8BYC6 898 aa29.25■■■□□ 2.27
Scn1b-201ENSMUST00000098548 GapdhsQ64467 440 aa29.24■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Atxn3Q9CVD2 355 aa29.24■■■□□ 2.27
Scn1b-201ENSMUST00000098548 GakQ99KY4 1305 aa29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Gm21663A0A0G2JE01 267 aa29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Rtf1A2AQ19 715 aaKnown RBP29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Gm7361D3Z6R1 267 aa29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 5031410I06RikE9Q4E0 267 aa29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Gm1979E9QAN3 267 aa29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Ubap1lG3UW59 384 aa29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Gm5862K7N5V5 267 aa29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Gm10220K7N660 267 aa29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Anp32aO35381 247 aa29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 MpndQ3TV65 487 aa29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Asic4Q7TNS7 539 aa29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Eif3bQ8JZQ9 803 aaKnown RBP29.22■■■□□ 2.27
Scn1b-201ENSMUST00000098548 Wdr43Q6ZQL4 677 aaKnown RBP29.21■■■□□ 2.27
Scn1b-201ENSMUST00000098548 4930523C07RikE9Q2T4 99 aa29.2■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Sugp2Q8CH09 1067 aa29.19■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Chmp7Q8R1T1 451 aa29.18■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Slc5a1Q8C3K6 665 aa29.16■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Ssfa2Q922B9 1252 aa29.16■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Ly75Q60767 1723 aa29.15■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Senp3Q9EP97 568 aaKnown RBP29.15■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Prim1P20664 417 aa29.14■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Ggnbp2Q5SV77 696 aa29.14■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Ccdc155Q80VJ8 648 aa29.14■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Bsdc1Q80Y55 427 aa29.14■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Ccar1Q8CH18 1146 aaKnown RBP29.14■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Prkrip1Q9CWV6 186 aaKnown RBP29.14■■■□□ 2.26
Scn1b-201ENSMUST00000098548 Sos1Q62245 1319 aa29.14■■■□□ 2.26
Scn1b-201ENSMUST00000098548 PappaQ8R4K8 1624 aa29.14■■■□□ 2.26
Scn1b-201ENSMUST00000098548 AampJ3QN89 436 aa29.13■■■□□ 2.25
Scn1b-201ENSMUST00000098548 NudcO35685 332 aaKnown RBP29.13■■■□□ 2.25
Scn1b-201ENSMUST00000098548 ApobrQ8VBT6 942 aa29.12■■■□□ 2.25
Scn1b-201ENSMUST00000098548 Abcc12Q80WJ6 1366 aa29.12■■■□□ 2.25
Scn1b-201ENSMUST00000098548 Ints5Q8CHT3 1018 aa29.11■■■□□ 2.25
Scn1b-201ENSMUST00000098548 Gas2l2Q5SSG4 860 aa29.1■■■□□ 2.25
Scn1b-201ENSMUST00000098548 Kiaa0319Q5SZV5 1081 aa29.1■■■□□ 2.25
Scn1b-201ENSMUST00000098548 Klhdc4Q921I2 584 aa29.1■■■□□ 2.25
Scn1b-201ENSMUST00000098548 Myo5bP21271 1818 aa29.09■■■□□ 2.25
Scn1b-201ENSMUST00000098548 Ccnl1Q52KE7 532 aaKnown RBP29.09■■■□□ 2.25
Scn1b-201ENSMUST00000098548 Ubr2Q6WKZ8 1755 aa29.08■■■□□ 2.25
Scn1b-201ENSMUST00000098548 Lrit1Q8K099 624 aa29.07■■■□□ 2.24
Scn1b-201ENSMUST00000098548 Pnpla7A2AJ88 1352 aa29.06■■■□□ 2.24
Scn1b-201ENSMUST00000098548 Tjp1P39447 1745 aaKnown RBP29.06■■■□□ 2.24
Scn1b-201ENSMUST00000098548 Ppfibp2O35711 882 aa29.05■■■□□ 2.24
Scn1b-201ENSMUST00000098548 Ksr2Q3UVC0 959 aa29.05■■■□□ 2.24
Scn1b-201ENSMUST00000098548 Crb1Q8VHS2 1405 aa29.04■■■□□ 2.24
Scn1b-201ENSMUST00000098548 Zcrb1Q9CZ96 217 aaKnown RBP29.04■■■□□ 2.24
Scn1b-201ENSMUST00000098548 Cdc37l1Q9CZP7 335 aa29.04■■■□□ 2.24
Scn1b-201ENSMUST00000098548 Ttc21aQ8C0S4 1314 aa29.03■■■□□ 2.24
Scn1b-201ENSMUST00000098548 Ppp6r1Q7TSI3 856 aa29.03■■■□□ 2.24
Scn1b-201ENSMUST00000098548 U2surpQ6NV83 1029 aaKnown RBP29.01■■■□□ 2.24
Scn1b-201ENSMUST00000098548 Ccdc171E9Q1U1 1324 aa29.01■■■□□ 2.23
Scn1b-201ENSMUST00000098548 Shank3Q4ACU6 1730 aa29.01■■■□□ 2.23
Scn1b-201ENSMUST00000098548 Ppp4r2Q0VGB7 417 aa29.01■■■□□ 2.23
Scn1b-201ENSMUST00000098548 Btbd11Q6GQW0 1109 aa29.01■■■□□ 2.23
Scn1b-201ENSMUST00000098548 Rgs17Q9QZB0 210 aa29.01■■■□□ 2.23
Scn1b-201ENSMUST00000098548 Ankrd50F7BE84 1390 aa29■■■□□ 2.23
Scn1b-201ENSMUST00000098548 Gnai1B2RSH2 354 aa29■■■□□ 2.23
Scn1b-201ENSMUST00000098548 Pibf1E9Q6K3 756 aa29■■■□□ 2.23
Scn1b-201ENSMUST00000098548 Gnai3Q9DC51 354 aa29■■■□□ 2.23
Scn1b-201ENSMUST00000098548 Irx6Q9ER75 438 aa29■■■□□ 2.23
Retrieved 100 of 22,080 RNA–protein pairs in 85.7 ms