RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Taf3Q5HZG4 932 aa18.88■□□□□ 0.61
Ret-202ENSMUST00000088790 Abcc1O35379 1528 aa18.88■□□□□ 0.61
Ret-202ENSMUST00000088790 Wdr78E9PYY5 807 aa18.87■□□□□ 0.61
Ret-202ENSMUST00000088790 Tbc1d32Q3URV1 1296 aa18.87■□□□□ 0.61
Ret-202ENSMUST00000088790 Krt85Q9Z2T6 507 aa18.87■□□□□ 0.61
Ret-202ENSMUST00000088790 Vps53Q8CCB4 832 aa18.87■□□□□ 0.61
Ret-202ENSMUST00000088790 Mum1Q6DID5 682 aa18.87■□□□□ 0.61
Ret-202ENSMUST00000088790 Pof1bQ8K4L4 587 aa18.87■□□□□ 0.61
Ret-202ENSMUST00000088790 Prl7d1P04769 244 aa18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 Gtf2f1Q3THK3 508 aaKnown RBP18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 Drc7Q6V3W6 876 aa18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 Ppp6r1Q7TSI3 856 aa18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 Smc2Q8CG48 1191 aaKnown RBP18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 Lmo7E9PYF4 1699 aaKnown RBP18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 Sf3b2Q3UJB0 878 aaKnown RBP18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 Terf2O35144 541 aa18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 Gjb2Q00977 226 aa18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 ZgpatQ8VDM1 511 aa18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 TnmdQ9EP64 317 aa18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 TimelessQ9R1X4 1197 aa18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 Supt6hQ62383 1726 aaKnown RBP18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 Cpa2Q504N0 417 aa18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 Fsd1Q7TPM6 496 aa18.86■□□□□ 0.61
Ret-202ENSMUST00000088790 Tpm4Q6IRU2 248 aa18.85■□□□□ 0.61
Ret-202ENSMUST00000088790 Ankib1Q6ZPS6 1085 aa18.85■□□□□ 0.61
Ret-202ENSMUST00000088790 Erc1Q99MI1 1120 aa18.85■□□□□ 0.61
Ret-202ENSMUST00000088790 Trim34bJ3QNR8 485 aa18.85■□□□□ 0.61
Ret-202ENSMUST00000088790 Rsph6aQ8CDR2 708 aa18.85■□□□□ 0.61
Ret-202ENSMUST00000088790 Fam13aQ8BGI4 693 aa18.84■□□□□ 0.61
Ret-202ENSMUST00000088790 Pik3r4Q8VD65 1358 aa18.84■□□□□ 0.61
Ret-202ENSMUST00000088790 Sytl4Q9R0Q1 673 aa18.84■□□□□ 0.61
Ret-202ENSMUST00000088790 Samd1D3YXK1 519 aa18.84■□□□□ 0.61
Ret-202ENSMUST00000088790 Ccdc155Q80VJ8 648 aa18.83■□□□□ 0.61
Ret-202ENSMUST00000088790 Trim34aQ99PP6 485 aa18.83■□□□□ 0.61
Ret-202ENSMUST00000088790 Syce3B5KM66 88 aa18.83■□□□□ 0.6
Ret-202ENSMUST00000088790 GpkowQ56A08 488 aa18.83■□□□□ 0.6
Ret-202ENSMUST00000088790 Trim27Q62158 513 aa18.83■□□□□ 0.6
Ret-202ENSMUST00000088790 Nol11Q8BJW5 723 aaKnown RBP18.83■□□□□ 0.6
Ret-202ENSMUST00000088790 Vamp4O70480 141 aa18.82■□□□□ 0.6
Ret-202ENSMUST00000088790 Med4Q9CQA5 270 aa18.82■□□□□ 0.6
Ret-202ENSMUST00000088790 Frmpd2A0A140LI67 1392 aa18.82■□□□□ 0.6
Ret-202ENSMUST00000088790 FanclQ9CR14 375 aa18.82■□□□□ 0.6
Ret-202ENSMUST00000088790 Rrs1Q9CYH6 365 aaKnown RBP18.82■□□□□ 0.6
Ret-202ENSMUST00000088790 Naip7Q9JIB3 1402 aa18.82■□□□□ 0.6
Ret-202ENSMUST00000088790 Nup88Q8CEC0 753 aaKnown RBP18.82■□□□□ 0.6
Ret-202ENSMUST00000088790 Cavin2Q63918 418 aaKnown RBP18.81■□□□□ 0.6
Ret-202ENSMUST00000088790 Fbxo2Q80UW2 297 aa18.81■□□□□ 0.6
Ret-202ENSMUST00000088790 Nop14Q8R3N1 860 aaKnown RBP18.81■□□□□ 0.6
Ret-202ENSMUST00000088790 ApobrQ8VBT6 942 aa18.81■□□□□ 0.6
Ret-202ENSMUST00000088790 Rbm5Q91YE7 815 aaKnown RBP18.81■□□□□ 0.6
Ret-202ENSMUST00000088790 Abcc2Q8VI47 1543 aa18.81■□□□□ 0.6
Ret-202ENSMUST00000088790 Mctp1E9PV86 951 aa18.81■□□□□ 0.6
Ret-202ENSMUST00000088790 Eif4a2P10630 407 aa18.81■□□□□ 0.6
Ret-202ENSMUST00000088790 Fam83gQ5SWY7 812 aa18.81■□□□□ 0.6
Ret-202ENSMUST00000088790 Fam184aE9PW83 1143 aa18.81■□□□□ 0.6
Ret-202ENSMUST00000088790 Gas2l2Q5SSG4 860 aa18.81■□□□□ 0.6
Ret-202ENSMUST00000088790 Tmem132eQ6IEE6 982 aa18.8■□□□□ 0.6
Ret-202ENSMUST00000088790 Bag3Q9JLV1 577 aaKnown RBP18.8■□□□□ 0.6
Ret-202ENSMUST00000088790 Ehmt1Q5DW34 1296 aa18.8■□□□□ 0.6
Ret-202ENSMUST00000088790 Pola1P33609 1465 aa18.8■□□□□ 0.6
Ret-202ENSMUST00000088790 Slc5a1Q8C3K6 665 aa18.8■□□□□ 0.6
Ret-202ENSMUST00000088790 LifrP42703 1092 aa18.8■□□□□ 0.6
Ret-202ENSMUST00000088790 TbcaP48428 108 aaKnown RBP18.8■□□□□ 0.6
Ret-202ENSMUST00000088790 Samm50Q8BGH2 469 aa18.8■□□□□ 0.6
Ret-202ENSMUST00000088790 Pms1Q8K119 917 aa18.8■□□□□ 0.6
Ret-202ENSMUST00000088790 Echdc1Q9D9V3 322 aa18.79■□□□□ 0.6
Ret-202ENSMUST00000088790 PalldQ9ET54 1408 aa18.79■□□□□ 0.6
Ret-202ENSMUST00000088790 EvcP57680 1005 aa18.79■□□□□ 0.6
Ret-202ENSMUST00000088790 Spty2d1Q68FG3 682 aa18.79■□□□□ 0.6
Ret-202ENSMUST00000088790 Rapgef4Q9EQZ6 1011 aa18.79■□□□□ 0.6
Ret-202ENSMUST00000088790 Brd1E9PZ26 1189 aaKnown RBP18.79■□□□□ 0.6
Ret-202ENSMUST00000088790 Nkx1-2P42580 305 aa18.79■□□□□ 0.6
Ret-202ENSMUST00000088790 Tmem94Q7TSH8 1360 aa18.79■□□□□ 0.6
Ret-202ENSMUST00000088790 Irf9Q61179 399 aa18.78■□□□□ 0.6
Ret-202ENSMUST00000088790 Soga3Q6NZL0 945 aa18.78■□□□□ 0.6
Ret-202ENSMUST00000088790 Fsd2Q8BZ52 692 aa18.78■□□□□ 0.6
Ret-202ENSMUST00000088790 Abca5Q8K448 1642 aa18.78■□□□□ 0.6
Ret-202ENSMUST00000088790 Ddx19aQ61655 478 aaKnown RBP18.78■□□□□ 0.6
Ret-202ENSMUST00000088790 AatkQ80YE4 1365 aa18.78■□□□□ 0.6
Ret-202ENSMUST00000088790 Strn4P58404 760 aa18.78■□□□□ 0.6
Ret-202ENSMUST00000088790 ImpactO55091 318 aa18.77■□□□□ 0.6
Ret-202ENSMUST00000088790 Zap70P43404 618 aa18.77■□□□□ 0.6
Ret-202ENSMUST00000088790 Map3k2Q61083 619 aa18.77■□□□□ 0.59
Ret-202ENSMUST00000088790 Krt84Q99M73 603 aa18.77■□□□□ 0.59
Ret-202ENSMUST00000088790 Dnajc2P54103 621 aaKnown RBP18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 ImmtQ8CAQ8 757 aaKnown RBP18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 Erbb3Q61526 1339 aa18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 Ankrd50F7BE84 1390 aa18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 Prrc2bQ7TPM1 1486 aaKnown RBP18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 Ddx58Q6Q899 926 aa18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 AidaQ8C4Q6 305 aa18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 Bag4Q8CI61 457 aa18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 Zeb2Q9R0G7 1215 aa18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 Pmfbp1Q9WVQ0 1022 aa18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 Cdc45Q9Z1X9 566 aa18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 Chrna2Q91X60 512 aa18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 Asxl2Q8BZ32 1370 aa18.76■□□□□ 0.59
Ret-202ENSMUST00000088790 Znf518aB2RRF6 1478 aaKnown RBP18.75■□□□□ 0.59
Ret-202ENSMUST00000088790 Tshz3Q8CGV9 1081 aa18.75■□□□□ 0.59
Ret-202ENSMUST00000088790 Farp2Q91VS8 1065 aa18.75■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms