RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Snap23O09044 210 aa11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Prim1P20664 417 aa11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Kif4P33174 1231 aa11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Map3k13Q1HKZ5 959 aa11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 CrebrfQ8CDG5 640 aaKnown RBP11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Rassf8Q8CJ96 419 aa11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Cep170bQ80U49 1574 aa11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Atp6v1dP57746 247 aa11.82□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 NexnQ7TPW1 607 aa11.82□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Uhrf1bp1lA2RSJ4 1457 aa11.82□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 LifrP42703 1092 aa11.82□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Usp48Q3V0C5 1052 aa11.82□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Utp3Q9JI13 469 aaKnown RBP11.82□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Sh3bp5Q9Z131 463 aa11.82□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Naip7Q9JIB3 1402 aa11.81□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Rbm27Q5SFM8 1060 aaKnown RBP11.81□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Zmym3Q9JLM4 1370 aa11.81□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Gm10563F6WIE4 79 aa11.81□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Trim28Q62318 834 aa11.81□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Pdia3P27773 505 aaKnown RBP11.81□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Fam83gQ5SWY7 812 aa11.81□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Ptpdc1Q6NZK8 747 aa11.81□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Ppp1r42Q8R1Z4 357 aa11.81□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Antxr1Q9CZ52 562 aa11.81□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Tceal9Q9DD24 104 aa11.81□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Abca8aQ8K442 1620 aa11.81□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Gdpd2Q9ESM6 539 aa11.8□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Mad1l1Q9WTX8 717 aaKnown RBP11.8□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Cdk5rap2Q8K389 1822 aa11.8□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Smarce1O54941 411 aaKnown RBP11.8□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Fkbp4P30416 458 aa11.8□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Kif20aP97329 887 aa11.8□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Iffo2Q8R2V2 512 aa11.8□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Pdia4P08003 638 aaKnown RBP11.8□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Arhgap23Q69ZH9 1483 aa11.79□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Tmem132eQ6IEE6 982 aa11.79□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Pes1Q9EQ61 584 aaKnown RBP11.79□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Ttc37F8VPK0 1563 aa11.79□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Samd1D3YXK1 519 aa11.79□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Gadd45bP22339 160 aa11.79□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 KinQ8K339 391 aa11.79□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 TatQ8QZR1 454 aa11.79□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Eif2ak4Q9QZ05 1648 aa11.78□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Exoc6bA6H5Z3 810 aa11.78□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Fyb1O35601 819 aa11.78□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Mphosph10Q810V0 681 aaKnown RBP11.78□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Sf3a1Q8K4Z5 791 aaKnown RBP11.78□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Ehbp1l1Q99MS7 1716 aa11.78□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 FosbP13346 338 aa11.78□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 MsnP26041 577 aaKnown RBP11.78□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Smc3Q9CW03 1217 aaKnown RBP11.78□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 RereQ80TZ9 1558 aa11.77□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Ubap1lG3UW59 384 aa11.77□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Isy1Q69ZQ2 285 aaKnown RBP11.77□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 HypkQ9CR41 129 aa11.77□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Topbp1Q6ZQF0 1515 aa11.77□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Nucb1Q02819 459 aaKnown RBP11.77□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Olfml1Q8BSH2 233 aa11.77□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Pof1bQ8K4L4 587 aa11.77□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Kif2cQ922S8 721 aa11.77□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 CenppQ9CZ92 286 aa11.77□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Sos1Q62245 1319 aa11.77□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Ahdc1Q6PAL7 1594 aaKnown RBP11.77□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Cdc42bpgQ80UW5 1551 aa11.77□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Mroh1E0CZ22 1640 aa11.76□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 EvcP57680 1005 aa11.76□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Akap12Q9WTQ5 1684 aa11.76□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Anapc15-psA0A140T8L6 141 aa11.76□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 4931400O07RikQ9D4M5 137 aa11.76□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Prune1Q8BIW1 454 aa11.76□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Nckap5lQ6GQX2 1323 aa11.75□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Zbtb22Q9Z0G7 638 aa11.75□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Tmem94Q7TSH8 1360 aa11.75□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Ppp6r3Q922D4 844 aa11.75□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 MaddQ80U28 1577 aa11.74□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 AglF8VPN4 1532 aa11.74□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Idi1P58044 227 aa11.74□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Tmx3Q8BXZ1 456 aa11.74□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Eya1P97767 591 aa11.74□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 GphnQ8BUV3 769 aaKnown RBP11.74□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 AnlnQ8K298 1121 aaKnown RBP11.74□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Tecpr2Q3UH45 1423 aa11.74□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Pik3r4Q8VD65 1358 aa11.74□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Ercc6l2Q9JIM3 1537 aa11.74□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Iqsec2Q5DU25 1478 aa11.73□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 F2rP30558 430 aa11.73□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Neurod6P48986 337 aa11.73□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Chpf2Q3UU43 768 aa11.73□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Samm50Q8BGH2 469 aa11.73□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 AdgbG3UZ78 1657 aa11.73□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Aldh8a1Q8BH00 487 aa11.73□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Tmem131lQ3U3D7 1597 aa11.73□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Glipr1l2Q9CQ35 332 aa11.73□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Ints3Q7TPD0 1041 aaKnown RBP11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Fez1Q8K0X8 392 aa11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Bcl11bQ99PV8 884 aa11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Med14A2ABV5 1459 aaKnown RBP11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Myom1Q62234 1667 aaKnown RBP11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 DnmbpQ6TXD4 1580 aa11.72□□□□□ -0.53
Pcdh1-201ENSMUST00000057185 Frmpd2A0A140LI67 1392 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms