RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Ric3Q8BPM6 367 aa16.17■□□□□ 0.18
Vps35-201ENSMUST00000034131 AnlnQ8K298 1121 aaKnown RBP16.17■□□□□ 0.18
Vps35-201ENSMUST00000034131 Zfyve16Q80U44 1528 aa16.16■□□□□ 0.18
Vps35-201ENSMUST00000034131 Nfatc2ipO09130 412 aa16.16■□□□□ 0.18
Vps35-201ENSMUST00000034131 Talpid3E9PV87 1520 aa16.16■□□□□ 0.18
Vps35-201ENSMUST00000034131 Robo2Q7TPD3 1470 aa16.16■□□□□ 0.18
Vps35-201ENSMUST00000034131 Cyp46a1Q9WVK8 500 aa16.16■□□□□ 0.18
Vps35-201ENSMUST00000034131 Tbc1d8Q9Z1A9 1134 aa16.16■□□□□ 0.18
Vps35-201ENSMUST00000034131 Map7d2A2AG50 781 aa16.15■□□□□ 0.18
Vps35-201ENSMUST00000034131 Smarce1O54941 411 aaKnown RBP16.15■□□□□ 0.18
Vps35-201ENSMUST00000034131 CebpzP53569 1052 aaKnown RBP16.15■□□□□ 0.18
Vps35-201ENSMUST00000034131 Zfp51Q3U4L8 781 aa16.15■□□□□ 0.18
Vps35-201ENSMUST00000034131 PtprtQ99M80 1454 aa16.15■□□□□ 0.18
Vps35-201ENSMUST00000034131 Sytl4Q9R0Q1 673 aa16.15■□□□□ 0.18
Vps35-201ENSMUST00000034131 Kif3bQ61771 747 aa16.15■□□□□ 0.18
Vps35-201ENSMUST00000034131 Rab11fip3Q8CHD8 1047 aa16.15■□□□□ 0.18
Vps35-201ENSMUST00000034131 Cep152A2AUM9 1736 aaKnown RBP16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 Oas2E9Q9A9 742 aa16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 U2surpQ6NV83 1029 aaKnown RBP16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 Sf3a1Q8K4Z5 791 aaKnown RBP16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 LlphQ9D945 130 aaKnown RBP16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 NinlQ6ZQ12 1394 aa16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 Mdc1Q5PSV9 1707 aa16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 Mcm3P25206 812 aaKnown RBP16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 Gtpbp6Q3U6U5 514 aa16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 Fez2Q6TYB5 348 aa16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 Mrvi1Q9WUX5 899 aaKnown RBP16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 Cfap73J3QPZ5 306 aa16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 Hsp90b1P08113 802 aaKnown RBP16.14■□□□□ 0.17
Vps35-201ENSMUST00000034131 Fam13aQ8BGI4 693 aa16.13■□□□□ 0.17
Vps35-201ENSMUST00000034131 EvcP57680 1005 aa16.13■□□□□ 0.17
Vps35-201ENSMUST00000034131 Cc2d1aQ8K1A6 943 aa16.13■□□□□ 0.17
Vps35-201ENSMUST00000034131 Med4Q9CQA5 270 aa16.13■□□□□ 0.17
Vps35-201ENSMUST00000034131 CenpjQ569L8 1344 aa16.13■□□□□ 0.17
Vps35-201ENSMUST00000034131 Uggt2E9Q4X2 1504 aa16.13■□□□□ 0.17
Vps35-201ENSMUST00000034131 Gnai1B2RSH2 354 aa16.13■□□□□ 0.17
Vps35-201ENSMUST00000034131 Tbc1d30Q69ZT9 766 aa16.13■□□□□ 0.17
Vps35-201ENSMUST00000034131 CtifQ6PEE2 600 aaKnown RBP16.13■□□□□ 0.17
Vps35-201ENSMUST00000034131 Naa30Q8CES0 364 aa16.13■□□□□ 0.17
Vps35-201ENSMUST00000034131 Gnai3Q9DC51 354 aa16.13■□□□□ 0.17
Vps35-201ENSMUST00000034131 Med14A2ABV5 1459 aaKnown RBP16.12■□□□□ 0.17
Vps35-201ENSMUST00000034131 Utp14aQ640M1 767 aaKnown RBP16.12■□□□□ 0.17
Vps35-201ENSMUST00000034131 Ccar2Q8VDP4 922 aaKnown RBP16.12■□□□□ 0.17
Vps35-201ENSMUST00000034131 Usp16Q99LG0 825 aa16.12■□□□□ 0.17
Vps35-201ENSMUST00000034131 KinQ8K339 391 aa16.11■□□□□ 0.17
Vps35-201ENSMUST00000034131 Myo3aQ8K3H5 1613 aa16.11■□□□□ 0.17
Vps35-201ENSMUST00000034131 Kcnf1Q7TSH7 493 aa16.11■□□□□ 0.17
Vps35-201ENSMUST00000034131 Dixdc1Q80Y83 711 aa16.11■□□□□ 0.17
Vps35-201ENSMUST00000034131 Nop14Q8R3N1 860 aaKnown RBP16.11■□□□□ 0.17
Vps35-201ENSMUST00000034131 Oxsr1Q6P9R2 527 aa16.11■□□□□ 0.17
Vps35-201ENSMUST00000034131 InsrP15208 1372 aa16.11■□□□□ 0.17
Vps35-201ENSMUST00000034131 Cchcr1Q8K2I2 770 aa16.1■□□□□ 0.17
Vps35-201ENSMUST00000034131 Neurl4Q5NCX5 1563 aa16.1■□□□□ 0.17
Vps35-201ENSMUST00000034131 Ube2hP62257 183 aa16.1■□□□□ 0.17
Vps35-201ENSMUST00000034131 Mum1Q6DID5 682 aa16.1■□□□□ 0.17
Vps35-201ENSMUST00000034131 PalmQ9Z0P4 383 aa16.1■□□□□ 0.17
Vps35-201ENSMUST00000034131 Ttc21bQ0HA38 1315 aa16.1■□□□□ 0.17
Vps35-201ENSMUST00000034131 Card6E9PWH2 1175 aa16.1■□□□□ 0.17
Vps35-201ENSMUST00000034131 4930548H24RikQ9D496 437 aa16.09■□□□□ 0.17
Vps35-201ENSMUST00000034131 CalcaP70160 136 aa16.09■□□□□ 0.17
Vps35-201ENSMUST00000034131 Fchsd2Q3USJ8 740 aa16.09■□□□□ 0.17
Vps35-201ENSMUST00000034131 Samd1D3YXK1 519 aa16.09■□□□□ 0.17
Vps35-201ENSMUST00000034131 Snx13Q6PHS6 957 aa16.09■□□□□ 0.17
Vps35-201ENSMUST00000034131 Ccdc178Q8CDV0 866 aa16.09■□□□□ 0.17
Vps35-201ENSMUST00000034131 Slc12a5Q91V14 1138 aa16.09■□□□□ 0.17
Vps35-201ENSMUST00000034131 Gm32742A0A1B0GT42 1604 aa16.08■□□□□ 0.16
Vps35-201ENSMUST00000034131 Zkscan7E9PVW1 718 aa16.08■□□□□ 0.16
Vps35-201ENSMUST00000034131 Frmd3Q8BHD4 595 aa16.08■□□□□ 0.16
Vps35-201ENSMUST00000034131 Bcar3Q9QZK2 820 aa16.08■□□□□ 0.16
Vps35-201ENSMUST00000034131 Uhrf1bp1B2KF50 1429 aa16.07■□□□□ 0.16
Vps35-201ENSMUST00000034131 Zkscan2G3X952 960 aa16.07■□□□□ 0.16
Vps35-201ENSMUST00000034131 Ccdc162pQ0VG85 912 aa16.07■□□□□ 0.16
Vps35-201ENSMUST00000034131 Zfp397Q7TNK4 527 aa16.07■□□□□ 0.16
Vps35-201ENSMUST00000034131 Ddx41Q91VN6 622 aaKnown RBP16.07■□□□□ 0.16
Vps35-201ENSMUST00000034131 Adgrl1Q80TR1 1466 aa16.07■□□□□ 0.16
Vps35-201ENSMUST00000034131 Bach1P97302 739 aa16.07■□□□□ 0.16
Vps35-201ENSMUST00000034131 CenpqQ9CPQ5 267 aa16.07■□□□□ 0.16
Vps35-201ENSMUST00000034131 Zkscan5Q9Z1D8 819 aa16.07■□□□□ 0.16
Vps35-201ENSMUST00000034131 Ttc37F8VPK0 1563 aa16.07■□□□□ 0.16
Vps35-201ENSMUST00000034131 Wdr93Q402B2 695 aa16.06■□□□□ 0.16
Vps35-201ENSMUST00000034131 Ddx19aQ61655 478 aaKnown RBP16.06■□□□□ 0.16
Vps35-201ENSMUST00000034131 Zscan22Q8BGS5 496 aa16.06■□□□□ 0.16
Vps35-201ENSMUST00000034131 Atg4a-psA0A0G2JFS9 396 aa16.06■□□□□ 0.16
Vps35-201ENSMUST00000034131 Cfap157Q0VFX2 523 aa16.06■□□□□ 0.16
Vps35-201ENSMUST00000034131 Atg4aQ8C9S8 396 aa16.06■□□□□ 0.16
Vps35-201ENSMUST00000034131 Babam1Q3UI43 333 aa16.06■□□□□ 0.16
Vps35-201ENSMUST00000034131 PdcQ9QW08 244 aa16.06■□□□□ 0.16
Vps35-201ENSMUST00000034131 Usp25P57080 1055 aa16.05■□□□□ 0.16
Vps35-201ENSMUST00000034131 Strn4P58404 760 aa16.05■□□□□ 0.16
Vps35-201ENSMUST00000034131 Tm6sf1P58749 370 aa16.05■□□□□ 0.16
Vps35-201ENSMUST00000034131 Tshz3Q8CGV9 1081 aa16.05■□□□□ 0.16
Vps35-201ENSMUST00000034131 Kif1bQ60575 1816 aaKnown RBP16.05■□□□□ 0.16
Vps35-201ENSMUST00000034131 Usp54Q8BL06 1588 aaKnown RBP16.05■□□□□ 0.16
Vps35-201ENSMUST00000034131 Hecw1Q8K4P8 1604 aa16.05■□□□□ 0.16
Vps35-201ENSMUST00000034131 1700019A02RikA0A087WPV9 146 aa16.05■□□□□ 0.16
Vps35-201ENSMUST00000034131 Arid3cA6PWV5 409 aa16.05■□□□□ 0.16
Vps35-201ENSMUST00000034131 Jakmip1Q8BVL9 626 aa16.05■□□□□ 0.16
Vps35-201ENSMUST00000034131 Aldh1l2Q8K009 923 aa16.05■□□□□ 0.16
Vps35-201ENSMUST00000034131 Zbtb22Q9Z0G7 638 aa16.05■□□□□ 0.16
Vps35-201ENSMUST00000034131 Prkar2bP31324 416 aa16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms