RNA–Protein interactions for RNA: ENSMUST00000028382.12

Nup35-201, Transcript of Nucleoporin NUP53, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup35, Length 1,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35-201ENSMUST00000028382 Nkx2-3P97334 362 aa20.42■□□□□ 0.86
Nup35-201ENSMUST00000028382 Cacna1sQ02789 1880 aa20.42■□□□□ 0.86
Nup35-201ENSMUST00000028382 Myo5bP21271 1818 aa20.41■□□□□ 0.86
Nup35-201ENSMUST00000028382 Ttc21aQ8C0S4 1314 aa20.41■□□□□ 0.86
Nup35-201ENSMUST00000028382 4930572O03RikQ8C5Y0 211 aa20.41■□□□□ 0.86
Nup35-201ENSMUST00000028382 Erbb3Q61526 1339 aa20.4■□□□□ 0.86
Nup35-201ENSMUST00000028382 Rtf1A2AQ19 715 aaKnown RBP20.39■□□□□ 0.85
Nup35-201ENSMUST00000028382 InhbeO08717 350 aa20.39■□□□□ 0.85
Nup35-201ENSMUST00000028382 Prim1P20664 417 aa20.39■□□□□ 0.85
Nup35-201ENSMUST00000028382 Pdzd9Q9D9M4 266 aa20.39■□□□□ 0.85
Nup35-201ENSMUST00000028382 Klhdc4Q921I2 584 aa20.38■□□□□ 0.85
Nup35-201ENSMUST00000028382 Kank1E9Q238 1360 aa20.38■□□□□ 0.85
Nup35-201ENSMUST00000028382 Ankrd50F7BE84 1390 aa20.38■□□□□ 0.85
Nup35-201ENSMUST00000028382 Ggnbp2Q5SV77 696 aa20.38■□□□□ 0.85
Nup35-201ENSMUST00000028382 Cdc37l1Q9CZP7 335 aa20.38■□□□□ 0.85
Nup35-201ENSMUST00000028382 Phkg2Q9DB30 406 aa20.38■□□□□ 0.85
Nup35-201ENSMUST00000028382 Ksr2Q3UVC0 959 aa20.37■□□□□ 0.85
Nup35-201ENSMUST00000028382 Larp1Q6ZQ58 1072 aaKnown RBP20.37■□□□□ 0.85
Nup35-201ENSMUST00000028382 Pm20d1Q8C165 503 aa20.37■□□□□ 0.85
Nup35-201ENSMUST00000028382 Sos1Q62245 1319 aa20.36■□□□□ 0.85
Nup35-201ENSMUST00000028382 Sf3b2Q3UJB0 878 aaKnown RBP20.36■□□□□ 0.85
Nup35-201ENSMUST00000028382 Ltbp1Q8CG19 1712 aa20.36■□□□□ 0.85
Nup35-201ENSMUST00000028382 Gnai1B2RSH2 354 aa20.35■□□□□ 0.85
Nup35-201ENSMUST00000028382 Rbm25B2RY56 838 aaKnown RBP20.35■□□□□ 0.85
Nup35-201ENSMUST00000028382 Speer4bQ9D9F7 267 aa20.35■□□□□ 0.85
Nup35-201ENSMUST00000028382 Gnai3Q9DC51 354 aa20.35■□□□□ 0.85
Nup35-201ENSMUST00000028382 Sgsm1Q8BPQ7 1093 aa20.34■□□□□ 0.85
Nup35-201ENSMUST00000028382 Abcc12Q80WJ6 1366 aa20.34■□□□□ 0.85
Nup35-201ENSMUST00000028382 Gm21680A0A0G2JGR8 267 aa20.34■□□□□ 0.85
Nup35-201ENSMUST00000028382 Kcnh4A2A5F7 1018 aa20.34■□□□□ 0.85
Nup35-201ENSMUST00000028382 CastP51125 788 aa20.34■□□□□ 0.85
Nup35-201ENSMUST00000028382 Anks4bQ8K3X6 423 aa20.33■□□□□ 0.84
Nup35-201ENSMUST00000028382 Nwd2Q6P5U7 1742 aa20.33■□□□□ 0.84
Nup35-201ENSMUST00000028382 Ttc41Q692V3 1318 aa20.32■□□□□ 0.84
Nup35-201ENSMUST00000028382 Sik1Q60670 779 aa20.32■□□□□ 0.84
Nup35-201ENSMUST00000028382 Asic4Q7TNS7 539 aa20.32■□□□□ 0.84
Nup35-201ENSMUST00000028382 Ssfa2Q922B9 1252 aa20.32■□□□□ 0.84
Nup35-201ENSMUST00000028382 Ubr2Q6WKZ8 1755 aa20.32■□□□□ 0.84
Nup35-201ENSMUST00000028382 Ankrd23Q812A3 306 aa20.31■□□□□ 0.84
Nup35-201ENSMUST00000028382 Plekhh1Q80TI1 1356 aa20.31■□□□□ 0.84
Nup35-201ENSMUST00000028382 Usp16Q99LG0 825 aa20.3■□□□□ 0.84
Nup35-201ENSMUST00000028382 U2surpQ6NV83 1029 aaKnown RBP20.29■□□□□ 0.84
Nup35-201ENSMUST00000028382 Eif3bQ8JZQ9 803 aaKnown RBP20.29■□□□□ 0.84
Nup35-201ENSMUST00000028382 Mst1rQ62190 1378 aa20.29■□□□□ 0.84
Nup35-201ENSMUST00000028382 Ccdc155Q80VJ8 648 aa20.29■□□□□ 0.84
Nup35-201ENSMUST00000028382 Ccar1Q8CH18 1146 aaKnown RBP20.29■□□□□ 0.84
Nup35-201ENSMUST00000028382 Ginm1Q91WR6 327 aa20.29■□□□□ 0.84
Nup35-201ENSMUST00000028382 Foxp4Q9DBY0 795 aaKnown RBP20.29■□□□□ 0.84
Nup35-201ENSMUST00000028382 PappaQ8R4K8 1624 aa20.28■□□□□ 0.84
Nup35-201ENSMUST00000028382 Trim26Q99PN3 545 aa20.28■□□□□ 0.84
Nup35-201ENSMUST00000028382 Gm21663A0A0G2JE01 267 aa20.27■□□□□ 0.84
Nup35-201ENSMUST00000028382 Gm7361D3Z6R1 267 aa20.27■□□□□ 0.84
Nup35-201ENSMUST00000028382 5031410I06RikE9Q4E0 267 aa20.27■□□□□ 0.84
Nup35-201ENSMUST00000028382 Gm1979E9QAN3 267 aa20.27■□□□□ 0.84
Nup35-201ENSMUST00000028382 Gm5862K7N5V5 267 aa20.27■□□□□ 0.84
Nup35-201ENSMUST00000028382 Gm10220K7N660 267 aa20.27■□□□□ 0.84
Nup35-201ENSMUST00000028382 Exoc5Q3TPX4 708 aa20.27■□□□□ 0.84
Nup35-201ENSMUST00000028382 Chmp7Q8R1T1 451 aa20.27■□□□□ 0.84
Nup35-201ENSMUST00000028382 NudcO35685 332 aaKnown RBP20.26■□□□□ 0.83
Nup35-201ENSMUST00000028382 Vps33bP59016 617 aa20.26■□□□□ 0.83
Nup35-201ENSMUST00000028382 Dmrt2Q8BG36 561 aa20.26■□□□□ 0.83
Nup35-201ENSMUST00000028382 Elp1Q7TT37 1333 aaKnown RBP20.26■□□□□ 0.83
Nup35-201ENSMUST00000028382 Vamp4O70480 141 aa20.25■□□□□ 0.83
Nup35-201ENSMUST00000028382 Cyp2d12Q8BVD2 504 aa20.25■□□□□ 0.83
Nup35-201ENSMUST00000028382 Pibf1E9Q6K3 756 aa20.25■□□□□ 0.83
Nup35-201ENSMUST00000028382 Slc5a1Q8C3K6 665 aa20.25■□□□□ 0.83
Nup35-201ENSMUST00000028382 Ints5Q8CHT3 1018 aa20.25■□□□□ 0.83
Nup35-201ENSMUST00000028382 Dlg5E9Q9R9 1921 aa20.24■□□□□ 0.83
Nup35-201ENSMUST00000028382 Tjp1P39447 1745 aaKnown RBP20.23■□□□□ 0.83
Nup35-201ENSMUST00000028382 Ddb1Q3U1J4 1140 aaKnown RBP20.23■□□□□ 0.83
Nup35-201ENSMUST00000028382 Btbd11Q6GQW0 1109 aa20.23■□□□□ 0.83
Nup35-201ENSMUST00000028382 Polr3glQ8R0C0 218 aa20.23■□□□□ 0.83
Nup35-201ENSMUST00000028382 Igsf1Q7TQA1 1317 aa20.22■□□□□ 0.83
Nup35-201ENSMUST00000028382 1700019A02RikA0A087WPV9 146 aa20.21■□□□□ 0.83
Nup35-201ENSMUST00000028382 Msh6P54276 1358 aaKnown RBP20.21■□□□□ 0.83
Nup35-201ENSMUST00000028382 Upf2A2AT37 1269 aaKnown RBP20.21■□□□□ 0.83
Nup35-201ENSMUST00000028382 Eif4a1P60843 406 aaKnown RBP20.2■□□□□ 0.82
Nup35-201ENSMUST00000028382 Ccdc60Q8C4J0 545 aa20.19■□□□□ 0.82
Nup35-201ENSMUST00000028382 Shank3Q4ACU6 1730 aa20.18■□□□□ 0.82
Nup35-201ENSMUST00000028382 Gm6268A2A3U9 297 aa20.18■□□□□ 0.82
Nup35-201ENSMUST00000028382 Crb1Q8VHS2 1405 aa20.18■□□□□ 0.82
Nup35-201ENSMUST00000028382 Ccdc171E9Q1U1 1324 aa20.18■□□□□ 0.82
Nup35-201ENSMUST00000028382 4930523C07RikE9Q2T4 99 aa20.17■□□□□ 0.82
Nup35-201ENSMUST00000028382 Atf5O70191 283 aa20.17■□□□□ 0.82
Nup35-201ENSMUST00000028382 ApobrQ8VBT6 942 aa20.17■□□□□ 0.82
Nup35-201ENSMUST00000028382 KarsQ99MN1 595 aaKnown RBP20.17■□□□□ 0.82
Nup35-201ENSMUST00000028382 Rwdd1Q9CQK7 243 aa20.17■□□□□ 0.82
Nup35-201ENSMUST00000028382 Irx6Q9ER75 438 aa20.17■□□□□ 0.82
Nup35-201ENSMUST00000028382 Apbb1Q9QXJ1 710 aa20.17■□□□□ 0.82
Nup35-201ENSMUST00000028382 Col1a2Q01149 1372 aa20.16■□□□□ 0.82
Nup35-201ENSMUST00000028382 GakQ99KY4 1305 aa20.16■□□□□ 0.82
Nup35-201ENSMUST00000028382 Chpf2Q3UU43 768 aa20.16■□□□□ 0.82
Nup35-201ENSMUST00000028382 Ccnl1Q52KE7 532 aaKnown RBP20.16■□□□□ 0.82
Nup35-201ENSMUST00000028382 G3bp1P97855 465 aaKnown RBP20.15■□□□□ 0.82
Nup35-201ENSMUST00000028382 Tnnt1O88346 262 aa20.14■□□□□ 0.81
Nup35-201ENSMUST00000028382 Plekhm2Q80TQ5 1018 aa20.13■□□□□ 0.81
Nup35-201ENSMUST00000028382 Tiam2Q6ZPF3 1715 aa20.13■□□□□ 0.81
Nup35-201ENSMUST00000028382 Q3TQI7 289 aaKnown RBP20.12■□□□□ 0.81
Nup35-201ENSMUST00000028382 Taok3Q8BYC6 898 aa20.12■□□□□ 0.81
Nup35-201ENSMUST00000028382 Tnnt3Q9QZ47 272 aa20.12■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms