RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 Atxn3Q9CVD2 355 aa15.85■□□□□ 0.13
Notch1-201ENSMUST00000028288 Lamc3Q9R0B6 1581 aa15.85■□□□□ 0.13
Notch1-201ENSMUST00000028288 Ttc19Q8CC21 365 aa15.85■□□□□ 0.13
Notch1-201ENSMUST00000028288 Ncoa1P70365 1447 aa15.85■□□□□ 0.13
Notch1-201ENSMUST00000028288 Magi1Q6RHR9 1471 aa15.84■□□□□ 0.13
Notch1-201ENSMUST00000028288 Trim34bJ3QNR8 485 aa15.84■□□□□ 0.13
Notch1-201ENSMUST00000028288 Iqca1Q9CUL5 857 aa15.84■□□□□ 0.13
Notch1-201ENSMUST00000028288 NcapgE9PWG6 1004 aa15.84■□□□□ 0.13
Notch1-201ENSMUST00000028288 Kdm4aQ8BW72 1064 aa15.84■□□□□ 0.13
Notch1-201ENSMUST00000028288 Speer4bQ9D9F7 267 aa15.84■□□□□ 0.13
Notch1-201ENSMUST00000028288 Gigyf1Q99MR1 1044 aaKnown RBP15.83■□□□□ 0.13
Notch1-201ENSMUST00000028288 Ppip5k2Q6ZQB6 1129 aa15.83■□□□□ 0.13
Notch1-201ENSMUST00000028288 Sos1Q62245 1319 aa15.83■□□□□ 0.13
Notch1-201ENSMUST00000028288 Irgm2A0A140LIF8 407 aa15.83■□□□□ 0.12
Notch1-201ENSMUST00000028288 Smarca5Q91ZW3 1051 aaKnown RBP15.83■□□□□ 0.12
Notch1-201ENSMUST00000028288 Erich3F6QRE9 1637 aa15.83■□□□□ 0.12
Notch1-201ENSMUST00000028288 Sf3b2Q3UJB0 878 aaKnown RBP15.83■□□□□ 0.12
Notch1-201ENSMUST00000028288 ZwintQ9CQU5 252 aa15.82■□□□□ 0.12
Notch1-201ENSMUST00000028288 AidaQ8C4Q6 305 aa15.82■□□□□ 0.12
Notch1-201ENSMUST00000028288 Lrrc45Q8CIM1 670 aa15.82■□□□□ 0.12
Notch1-201ENSMUST00000028288 Gimap6Q8K349 305 aa15.82■□□□□ 0.12
Notch1-201ENSMUST00000028288 Flad1Q8R123 492 aa15.82■□□□□ 0.12
Notch1-201ENSMUST00000028288 Dnaaf4Q8R368 420 aa15.82■□□□□ 0.12
Notch1-201ENSMUST00000028288 Mrc2Q64449 1479 aa15.82■□□□□ 0.12
Notch1-201ENSMUST00000028288 ImpactO55091 318 aa15.82■□□□□ 0.12
Notch1-201ENSMUST00000028288 Themis2Q91YX0 663 aa15.82■□□□□ 0.12
Notch1-201ENSMUST00000028288 Ccdc39Q9D5Y1 937 aa15.82■□□□□ 0.12
Notch1-201ENSMUST00000028288 Aldh1l1Q8R0Y6 902 aa15.82■□□□□ 0.12
Notch1-201ENSMUST00000028288 Map4k4P97820 1233 aaKnown RBP15.81■□□□□ 0.12
Notch1-201ENSMUST00000028288 Cct4P80315 539 aaKnown RBP15.81■□□□□ 0.12
Notch1-201ENSMUST00000028288 Fkbp5Q64378 456 aa15.81■□□□□ 0.12
Notch1-201ENSMUST00000028288 TxlnbQ8VBT1 685 aa15.81■□□□□ 0.12
Notch1-201ENSMUST00000028288 Ssr1Q9CY50 286 aaKnown RBP15.81■□□□□ 0.12
Notch1-201ENSMUST00000028288 Abcc5Q9R1X5 1436 aa15.81■□□□□ 0.12
Notch1-201ENSMUST00000028288 Zscan20B2KFW1 1030 aa15.81■□□□□ 0.12
Notch1-201ENSMUST00000028288 Evi5lH3BKQ3 813 aa15.81■□□□□ 0.12
Notch1-201ENSMUST00000028288 Gm14025A2AP89 1413 aa15.81■□□□□ 0.12
Notch1-201ENSMUST00000028288 Gbp4Q61107 620 aa15.81■□□□□ 0.12
Notch1-201ENSMUST00000028288 Hoxa7P02830 229 aa15.8■□□□□ 0.12
Notch1-201ENSMUST00000028288 Wasf1Q8R5H6 559 aa15.8■□□□□ 0.12
Notch1-201ENSMUST00000028288 Map9Q3TRR0 646 aa15.8■□□□□ 0.12
Notch1-201ENSMUST00000028288 Rnf187Q8BFX1 236 aa15.8■□□□□ 0.12
Notch1-201ENSMUST00000028288 Lmbr1Q9JIT0 490 aa15.8■□□□□ 0.12
Notch1-201ENSMUST00000028288 Ell2Q3UKU1 639 aa15.8■□□□□ 0.12
Notch1-201ENSMUST00000028288 Thoc2B1AZI6 1594 aaKnown RBP15.8■□□□□ 0.12
Notch1-201ENSMUST00000028288 Ercc6lQ8BHK9 1240 aa15.8■□□□□ 0.12
Notch1-201ENSMUST00000028288 Fam43aQ8BUP8 424 aa15.8■□□□□ 0.12
Notch1-201ENSMUST00000028288 Gm7361D3Z6R1 267 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Adck5Q80V03 582 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Cfap45Q9D9U9 551 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Dydc1Q9D9T0 175 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Gsdma2Q32M21 443 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Rcan3Q9JKK0 239 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Mapk8ip1Q9WVI9 707 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Gjb2Q00977 226 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Frmpd1A2AKB4 1549 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Gm21663A0A0G2JE01 267 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 5031410I06RikE9Q4E0 267 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Gm1979E9QAN3 267 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Gm5862K7N5V5 267 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Gm10220K7N660 267 aa15.79■□□□□ 0.12
Notch1-201ENSMUST00000028288 Smc5Q8CG46 1101 aaKnown RBP15.78■□□□□ 0.12
Notch1-201ENSMUST00000028288 Klf15Q9EPW2 415 aa15.78■□□□□ 0.12
Notch1-201ENSMUST00000028288 Pik3r4Q8VD65 1358 aa15.77■□□□□ 0.12
Notch1-201ENSMUST00000028288 Mipol1Q9D9F8 279 aa15.77■□□□□ 0.11
Notch1-201ENSMUST00000028288 Zbtb22Q9Z0G7 638 aa15.77■□□□□ 0.11
Notch1-201ENSMUST00000028288 Plekhd1B2RPU2 505 aa15.77■□□□□ 0.11
Notch1-201ENSMUST00000028288 SrrtQ99MR6 875 aaKnown RBP15.77■□□□□ 0.11
Notch1-201ENSMUST00000028288 Ddx19aQ61655 478 aaKnown RBP15.76■□□□□ 0.11
Notch1-201ENSMUST00000028288 Golim4Q8BXA1 655 aa15.76■□□□□ 0.11
Notch1-201ENSMUST00000028288 TkfcQ8VC30 578 aa15.76■□□□□ 0.11
Notch1-201ENSMUST00000028288 Riok1Q922Q2 567 aa15.76■□□□□ 0.11
Notch1-201ENSMUST00000028288 Rrs1Q9CYH6 365 aaKnown RBP15.76■□□□□ 0.11
Notch1-201ENSMUST00000028288 Hvcn1Q3U2S8 269 aa15.76■□□□□ 0.11
Notch1-201ENSMUST00000028288 ImmtQ8CAQ8 757 aaKnown RBP15.76■□□□□ 0.11
Notch1-201ENSMUST00000028288 TmpoQ61033 693 aaKnown RBP15.76■□□□□ 0.11
Notch1-201ENSMUST00000028288 Rprd2Q6NXI6 1469 aaKnown RBP15.76■□□□□ 0.11
Notch1-201ENSMUST00000028288 Slc26a8Q8R0C3 999 aa15.76■□□□□ 0.11
Notch1-201ENSMUST00000028288 Mcm4P49717 862 aa15.75■□□□□ 0.11
Notch1-201ENSMUST00000028288 Cbx1P83917 185 aaKnown RBP15.75■□□□□ 0.11
Notch1-201ENSMUST00000028288 Lrrfip1Q3UZ39 729 aaKnown RBP15.75■□□□□ 0.11
Notch1-201ENSMUST00000028288 Ppp1r42Q8R1Z4 357 aa15.75■□□□□ 0.11
Notch1-201ENSMUST00000028288 Gcc2Q8CHG3 1679 aa15.75■□□□□ 0.11
Notch1-201ENSMUST00000028288 Ces1hD3Z298 562 aa15.75■□□□□ 0.11
Notch1-201ENSMUST00000028288 Wwc1Q5SXA9 1104 aa15.75■□□□□ 0.11
Notch1-201ENSMUST00000028288 Mcm3P25206 812 aaKnown RBP15.75■□□□□ 0.11
Notch1-201ENSMUST00000028288 Kcnj4P52189 445 aa15.75■□□□□ 0.11
Notch1-201ENSMUST00000028288 Ccdc83Q9D4V3 305 aa15.75■□□□□ 0.11
Notch1-201ENSMUST00000028288 Gm21680A0A0G2JGR8 267 aa15.74■□□□□ 0.11
Notch1-201ENSMUST00000028288 Nol7Q9D7Z3 254 aaKnown RBP15.74■□□□□ 0.11
Notch1-201ENSMUST00000028288 AI481877A2ALV5 1481 aa15.74■□□□□ 0.11
Notch1-201ENSMUST00000028288 BC005561E9Q5E2 1589 aa15.74■□□□□ 0.11
Notch1-201ENSMUST00000028288 Prkar2bP31324 416 aa15.74■□□□□ 0.11
Notch1-201ENSMUST00000028288 Wdr62Q3U3T8 1523 aa15.74■□□□□ 0.11
Notch1-201ENSMUST00000028288 Pafah1b1P63005 410 aaKnown RBP15.74■□□□□ 0.11
Notch1-201ENSMUST00000028288 Rapgef4Q9EQZ6 1011 aa15.74■□□□□ 0.11
Notch1-201ENSMUST00000028288 Tbc1d9Q3UYK3 1264 aa15.73■□□□□ 0.11
Notch1-201ENSMUST00000028288 Polr3aB2RXC6 1390 aa15.73■□□□□ 0.11
Notch1-201ENSMUST00000028288 Unc13aQ4KUS2 1712 aa15.73■□□□□ 0.11
Notch1-201ENSMUST00000028288 Nup133Q8R0G9 1155 aa15.73■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms