RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TMEM18Q96B42 140 aa5.16□□□□□ -1.58
LINC00397-202ENST00000606785 EGLN2Q96KS0 407 aa5.16□□□□□ -1.58
LINC00397-202ENST00000606785 SPAG5Q96R06 1193 aa5.16□□□□□ -1.58
LINC00397-202ENST00000606785 CDRT15Q96T59 188 aa5.16□□□□□ -1.58
LINC00397-202ENST00000606785 CITED2Q99967 270 aaPredicted RBP5.16□□□□□ -1.58
LINC00397-202ENST00000606785 SYT17Q9BSW7 474 aa5.16□□□□□ -1.58
LINC00397-202ENST00000606785 RTN4RQ9BZR6 473 aa5.16□□□□□ -1.58
LINC00397-202ENST00000606785 C2orf40Q9H1Z8 148 aa5.16□□□□□ -1.58
LINC00397-202ENST00000606785 MKKSQ9NPJ1 570 aaPredicted RBP5.16□□□□□ -1.58
LINC00397-202ENST00000606785 GPR108Q9NPR9 543 aa5.16□□□□□ -1.58
LINC00397-202ENST00000606785 TMEM45AQ9NWC5 275 aa5.16□□□□□ -1.58
LINC00397-202ENST00000606785 CISD1Q9NZ45 108 aaKnown RBP5.16□□□□□ -1.58
LINC00397-202ENST00000606785 DNAJB4Q9UDY4 337 aa5.16□□□□□ -1.58
LINC00397-202ENST00000606785 STON1Q9Y6Q2 735 aa5.16□□□□□ -1.58
LINC00397-202ENST00000606785 MAGEB17A8MXT2 336 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 PSMA7O14818 248 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 FOXN1O15353 648 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 TADA2AO75478 443 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 NDUFB4O95168 129 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 SLU7O95391 586 aaKnown RBP5.15□□□□□ -1.59
LINC00397-202ENST00000606785 PRLRP16471 622 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 ERCC2P18074 760 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 CD58P19256 250 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 MYF6P23409 242 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 HOXC9P31274 260 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 KRT2P35908 639 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 MATR3P43243 847 aaKnown RBP eCLIP5.15□□□□□ -1.59
LINC00397-202ENST00000606785 MMP14P50281 582 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 RPS13P62277 151 aaKnown RBP5.15□□□□□ -1.59
LINC00397-202ENST00000606785 GRSF1Q12849 480 aaKnown RBP eCLIP5.15□□□□□ -1.59
LINC00397-202ENST00000606785 SMTNL2Q2TAL5 461 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 PIK3CD-AS1Q5SR53 167 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 C6orf10Q5SRN2 563 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 DHRS7BQ6IAN0 325 aaPredicted RBP5.15□□□□□ -1.59
LINC00397-202ENST00000606785 HEPHL1Q6MZM0 1159 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 ARHGEF25Q86VW2 580 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 CAMK1DQ8IU85 385 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 AGBL3Q8NEM8 1001 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 TSPAN14Q8NG11 270 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 SETD6Q8TBK2 473 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 HDAC11Q96DB2 347 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 SLC25A23Q9BV35 468 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 THUMPD3Q9BV44 507 aaKnown RBP5.15□□□□□ -1.59
LINC00397-202ENST00000606785 SPATC1LQ9H0A9 340 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 KLHL31Q9H511 634 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 EPB41L5Q9HCM4 733 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 HINT3Q9NQE9 182 aaKnown RBP5.15□□□□□ -1.59
LINC00397-202ENST00000606785 THSD1Q9NS62 852 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 HAO2Q9NYQ3 351 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 UBA2Q9UBT2 640 aaPredicted RBP5.15□□□□□ -1.59
LINC00397-202ENST00000606785 WDR17Q8IZU2 1322 aa5.15□□□□□ -1.59
LINC00397-202ENST00000606785 A0A087X1B8 175 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 KANSL1LA0AUZ9 987 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 LINC01548A6NM66 108 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 STMND1H3BQB6 276 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 SMAD9O15198 467 aaKnown RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 WDR46O15213 610 aaKnown RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 DIAPH2O60879 1101 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 C1QL1O75973 258 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 RSL1D1O76021 490 aaKnown RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 BCL10O95999 233 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 HOXC8P31273 242 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 TLX1P31314 330 aaPredicted RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 AVPR1AP37288 418 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 CCR10P46092 362 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 METAP2P50579 478 aaKnown RBP eCLIP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 RAB28P51157 221 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 CDH12P55289 794 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 SREBF2Q12772 1141 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 TNIP1Q15025 636 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 SNAPC1Q16533 368 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 HYAL4Q2M3T9 481 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 CBWD6Q4V339 395 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 DCAF6Q58WW2 860 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 CBWD3Q5JTY5 395 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 ASPHD1Q5U4P2 390 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 PAPD7Q5XG87 772 aaKnown RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 SIGIRRQ6IA17 410 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 CAVIN1Q6NZI2 390 aaKnown RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 SHQ1Q6PI26 577 aaKnown RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 SUSD1Q6UWL2 747 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 OLFML1Q6UWY5 402 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 MTSS1LQ765P7 747 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 ERN2Q76MJ5 926 aaKnown RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 CACNA2D4Q7Z3S7 1137 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 IQCHQ86VS3 1027 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 MB21D2Q8IYB1 491 aaPredicted RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 PI4KAP1Q8N8J0 262 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 TEX45Q8NA69 505 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 GDAP1Q8TB36 358 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 BICD2Q8TD16 824 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 TEKT4Q8WW24 435 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 MSI2Q96DH6 328 aaKnown RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 ARSGQ96EG1 525 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 LINC00615Q96LM1 132 aaPredicted RBP5.14□□□□□ -1.59
LINC00397-202ENST00000606785 FNBP1Q96RU3 617 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 FAM118BQ9BPY3 351 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 MSTO1Q9BUK6 570 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 GPR88Q9GZN0 384 aa5.14□□□□□ -1.59
LINC00397-202ENST00000606785 SLCO5A1Q9H2Y9 848 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms