RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	KRTAP17-1	Q9BYP8	105 aa		5.76	□□□□□ -1.49
LINC01088-208	ENST00000511895	PDCL3	Q9H2J4	239 aa		5.76	□□□□□ -1.49
LINC01088-208	ENST00000511895	PCDHB16	Q9NRJ7	776 aa		5.76	□□□□□ -1.49
LINC01088-208	ENST00000511895	ZNF580	Q9UK33	172 aa		5.76	□□□□□ -1.49
LINC01088-208	ENST00000511895	CDC14A	Q9UNH5	594 aa		5.76	□□□□□ -1.49
LINC01088-208	ENST00000511895	NAALADL1	Q9UQQ1	740 aa		5.76	□□□□□ -1.49
LINC01088-208	ENST00000511895	NFE2L3	Q9Y4A8	694 aa		5.76	□□□□□ -1.49
LINC01088-208	ENST00000511895	CNTNAP1	P78357	1384 aa		5.76	□□□□□ -1.49
LINC01088-208	ENST00000511895	CCDC141	Q6ZP82	1450 aa		5.76	□□□□□ -1.49
LINC01088-208	ENST00000511895	GCC2	Q8IWJ2	1684 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	CCDC144A	A2RUR9	1427 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	TNS3	Q68CZ2	1445 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	C4orf47	A7E2U8	309 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	IFNL4	K9M1U5	179 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	TNFSF14	O43557	240 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	MMP2	P08253	660 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	ZNF12	P17014	697 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	ITGAX	P20702	1163 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	GPT	P24298	496 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	GABRB2	P47870	512 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	PEX5	P50542	639 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	CASP6	P55212	293 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	KEAP1	Q14145	624 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	SLC39A14	Q15043	492 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	GSTA3	Q16772	222 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	FBXO46	Q6PJ61	603 aa	Predicted RBP	5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	ATF7IP	Q6VMQ6	1270 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	R3HCC1L	Q7Z5L2	792 aa	Known RBP	5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	CNTROB	Q8N137	903 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	PPM1M	Q96MI6	270 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	C6orf106	Q9H6K1	298 aa	Predicted RBP	5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	CD93	Q9NPY3	652 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	RCOR1	Q9UKL0	485 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	SCIN	Q9Y6U3	715 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	TRIOBP	Q9H2D6	2365 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	PLEKHG2	Q9H7P9	1386 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	EVPL	Q92817	2033 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	CCDC18	Q5T9S5	1454 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	ARHGEF5	Q12774	1597 aa		5.75	□□□□□ -1.49
LINC01088-208	ENST00000511895	TECPR2	O15040	1411 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895		A0A0U1RQJ8	604 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895		A0A1W2PPH5	198 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	CLEC18A	A5D8T8	446 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	SEC14L5	O43304	696 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	SEC31A	O94979	1220 aa	Known RBP	5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	AGA	P20933	346 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	CCKBR	P32239	447 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	ELF1	P32519	619 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	CPOX	P36551	454 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	ART1	P52961	327 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	EIF3B	P55884	814 aa	Known RBP	5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	SEC61A1	P61619	476 aa	Known RBP	5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	SORD	Q00796	357 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	DHX34	Q14147	1143 aa	Known RBP	5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	SLC35F3	Q8IY50	421 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	CLEC18C	Q8NCF0	446 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	AGBL3	Q8NEM8	1001 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	BEST2	Q8NFU1	509 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	PABPC5	Q96DU9	382 aa	Known RBP	5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	RTP4	Q96DX8	246 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	GLIS2	Q9BZE0	524 aa	Predicted RBP	5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	SLCO5A1	Q9H2Y9	848 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	DDX4	Q9NQI0	724 aa	Known RBP	5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	IRAK4	Q9NWZ3	460 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	TAS2R10	Q9NYW0	307 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	SLC9A2	Q9UBY0	812 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	TMEM98	Q9Y2Y6	226 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	SNX9	Q9Y5X1	595 aa		5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	PARP4	Q9UKK3	1724 aa	Known RBP	5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	ZNF644	Q9H582	1327 aa	Predicted RBP	5.74	□□□□□ -1.49
LINC01088-208	ENST00000511895	USP17L23	D6RBM5	183 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	ACOT8	O14734	319 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	ZBTB11	O95625	1053 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	HOXB6	P17509	224 aa	Known RBP	5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	EPHA8	P29322	1005 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	STX2	P32856	288 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	SHMT1	P34896	483 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	TUBA1B	P68363	451 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	MYBPH	Q13203	477 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	TBX2	Q13207	712 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	CAPRIN2	Q6IMN6	1127 aa	Known RBP	5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	B3GNT6	Q6ZMB0	384 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	DSEL	Q8IZU8	1212 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	PGBD5	Q8N414	524 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	ZBTB2	Q8N680	514 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	PCYOX1L	Q8NBM8	494 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	OR1F2P	Q96R84	312 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	KXD1	Q9BQD3	176 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	USP44	Q9H0E7	712 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	WWOX	Q9NZC7	414 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	FBXO9	Q9UK97	447 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	AAR2	Q9Y312	384 aa	Known RBP	5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	PCDHGB1	Q9Y5G3	927 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	PHRF1	Q9P1Y6	1649 aa	Known RBP	5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	NRXN3	Q9Y4C0	1643 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	KCP	Q6ZWJ8	1503 aa		5.73	□□□□□ -1.49
LINC01088-208	ENST00000511895	ATP7B	P35670	1465 aa		5.72	□□□□□ -1.49
LINC01088-208	ENST00000511895	ARHGEF10	O15013	1369 aa		5.72	□□□□□ -1.49
LINC01088-208	ENST00000511895	CCNB3	Q8WWL7	1395 aa		5.72	□□□□□ -1.49
LINC01088-208	ENST00000511895		A0A1W2PQM1	296 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms