RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 FRYQ5TBA9 3013 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 ZFC3H1O60293 1989 aaKnown RBP11.19□□□□□ -0.62
RFFL-204ENST00000414419 C1orf232A0A0U1RR37 186 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 CCDC66A2RUB6 948 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 TRABD2BA6NFA1 517 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 TMEM202A6NGA9 273 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 ANKRD66B4E2M5 251 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 YY2O15391 372 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 PJA2O43164 708 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 PRLP01236 227 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 PTMAP06454 111 aaKnown RBP11.19□□□□□ -0.62
RFFL-204ENST00000414419 PYGLP06737 847 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 MMP2P08253 660 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 MYF5P13349 255 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 CTNNA2P26232 953 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 CTNNA1P35221 906 aaKnown RBP11.19□□□□□ -0.62
RFFL-204ENST00000414419 MARCKSL1P49006 195 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 COPS2P61201 443 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 SKOR1P84550 965 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 PTSQ03393 145 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 DPTQ07507 201 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 TARDBPQ13148 414 aaKnown RBP eCLIP11.19□□□□□ -0.622e-6■■■■□ 22.6
RFFL-204ENST00000414419 PTPRRQ15256 657 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 PPP2R5EQ16537 467 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 PCSK7Q16549 785 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 C6orf132Q5T0Z8 1188 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 LVRNQ6Q4G3 990 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 KDELC2Q7Z4H8 507 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 TECPR1Q7Z6L1 1165 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 TAF8Q7Z7C8 310 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 HEATR4Q86WZ0 1026 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 MARCH9Q86YJ5 346 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 NRSN1Q8IZ57 195 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 SYCE1Q8N0S2 351 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 CBARPQ8N350 705 aaPredicted RBP11.19□□□□□ -0.62
RFFL-204ENST00000414419 PDCD7Q8N8D1 485 aaKnown RBP11.19□□□□□ -0.62
RFFL-204ENST00000414419 IFI44Q8TCB0 444 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 MAPK15Q8TD08 544 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 KRT35Q92764 455 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 HAUS1Q96CS2 278 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 IMP4Q96G21 291 aaKnown RBP11.19□□□□□ -0.62
RFFL-204ENST00000414419 PDXPQ96GD0 296 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 LGR4Q9BXB1 951 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 HEMGNQ9BXL5 484 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 CLPBQ9H078 707 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 CYP4F12Q9HCS2 524 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 MRPL40Q9NQ50 206 aaKnown RBP11.19□□□□□ -0.62
RFFL-204ENST00000414419 PKD2L2Q9NZM6 624 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 KLHL8Q9P2G9 620 aaPredicted RBP11.19□□□□□ -0.62
RFFL-204ENST00000414419 GULP1Q9UBP9 304 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 AMFRQ9UKV5 643 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 ZMIZ1Q9ULJ6 1067 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 CLCA2Q9UQC9 943 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 REXO2Q9Y3B8 237 aaKnown RBP11.19□□□□□ -0.62
RFFL-204ENST00000414419 PCDHA3Q9Y5H8 950 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 IGF2RP11717 2491 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 UNC13CQ8NB66 2214 aa11.19□□□□□ -0.62
RFFL-204ENST00000414419 ACACAQ13085 2346 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 A0A0U1RQS6 177 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 PRSS38A1L453 326 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 MACROD2A1Z1Q3 448 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 HACD1B0YJ81 288 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 H7C0C1 242 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 APOC4-APOC2K7ER74 178 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 OPA1O60313 960 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 CLDN7O95471 211 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 APOC2P02655 101 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 CELA2BP08218 269 aaPredicted RBP11.18□□□□□ -0.62
RFFL-204ENST00000414419 PECAM1P16284 738 aaPredicted RBP11.18□□□□□ -0.62
RFFL-204ENST00000414419 PTPN3P26045 913 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 TEAD1P28347 426 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 ATP5OP48047 213 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 CLDN6P56747 220 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 RWDD2BP57060 319 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 GSDMDP57764 484 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 CDK3Q00526 305 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 INSM1Q01101 510 aaPredicted RBP11.18□□□□□ -0.62
RFFL-204ENST00000414419 CDK18Q07002 472 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 GALNT3Q14435 633 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 IHHQ14623 411 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 PRKD1Q15139 912 aaPredicted RBP11.18□□□□□ -0.62
RFFL-204ENST00000414419 QPCTQ16769 361 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 ZNF765Q7L2R6 523 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 PID1Q7Z2X4 250 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 EFL1Q7Z2Z2 1120 aaKnown RBP11.18□□□□□ -0.62
RFFL-204ENST00000414419 NLRP8Q86W28 1048 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 RAVER1Q8IY67 606 aaKnown RBP11.18□□□□□ -0.62
RFFL-204ENST00000414419 PELI3Q8N2H9 469 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 OR1E3Q8WZA6 343 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 NAT6Q93015 286 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 TEKT5Q96M29 485 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 SMIM14Q96QK8 99 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 LYSMD1Q96S90 227 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 VAT1Q99536 393 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 BOCQ9BWV1 1114 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 TEX101Q9BY14 249 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 LACRTQ9GZZ8 138 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 ABCG8Q9H221 673 aa11.18□□□□□ -0.62
RFFL-204ENST00000414419 SUDS3Q9H7L9 328 aaPredicted RBP11.18□□□□□ -0.62
RFFL-204ENST00000414419 CARS2Q9HA77 564 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms