RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeast

Gene YOP1, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOP1	YPR028W	TTI1	P36097	1038 aa		4.31	□□□□□ -1.72
YOP1	YPR028W	YIG1	Q08956	461 aa		4.31	□□□□□ -1.72
YOP1	YPR028W	PNS1	Q12412	539 aa		4.31	□□□□□ -1.72
YOP1	YPR028W	TUB2	P02557	457 aa	Known RBP	4.3	□□□□□ -1.72
YOP1	YPR028W	PTC7	P38797	343 aa		4.3	□□□□□ -1.72
YOP1	YPR028W	YPL277C	Q08989	487 aa		4.29	□□□□□ -1.72
YOP1	YPR028W	APC11	Q12157	165 aa		4.29	□□□□□ -1.72
YOP1	YPR028W	SMC1	P32908	1225 aa		4.28	□□□□□ -1.72
YOP1	YPR028W	ETP1	P38748	585 aa	Known RBP	4.28	□□□□□ -1.72
YOP1	YPR028W	MEC3	Q02574	474 aa		4.28	□□□□□ -1.72
YOP1	YPR028W	CLU1	Q03690	1277 aa	Known RBP	4.28	□□□□□ -1.72
YOP1	YPR028W	RPS13	P05756	151 aa	Known RBP	4.27	□□□□□ -1.73
YOP1	YPR028W	SHM2	P37291	469 aa	Known RBP	4.27	□□□□□ -1.73
YOP1	YPR028W	GTS1	P40956	396 aa		4.27	□□□□□ -1.73
YOP1	YPR028W	ALG6	Q12001	544 aa	Known RBP	4.27	□□□□□ -1.73
YOP1	YPR028W	YLR358C	O13565	187 aa		4.26	□□□□□ -1.73
YOP1	YPR028W	HTS1	P07263	546 aa	Known RBP	4.26	□□□□□ -1.73
YOP1	YPR028W	RRN6	P32786	894 aa		4.26	□□□□□ -1.73
YOP1	YPR028W	REI1	P38344	393 aa	Predicted RBP	4.26	□□□□□ -1.73
YOP1	YPR028W	CTS1	P29029	562 aa		4.25	□□□□□ -1.73
YOP1	YPR028W	SMY2	P32909	740 aa	Known RBP	4.25	□□□□□ -1.73
YOP1	YPR028W	RPB10	P22139	70 aa		4.24	□□□□□ -1.73
YOP1	YPR028W	CWC15	Q03772	175 aa	Known RBP	4.24	□□□□□ -1.73
YOP1	YPR028W	NPR1	P22211	790 aa		4.23	□□□□□ -1.73
YOP1	YPR028W	UTP22	P53254	1237 aa	Predicted RBP	4.23	□□□□□ -1.73
YOP1	YPR028W	SNO2	P53823	222 aa		4.23	□□□□□ -1.73
YOP1	YPR028W	CTR9	P89105	1077 aa		4.23	□□□□□ -1.73
YOP1	YPR028W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
YOP1	YPR028W	PUP1	P25043	261 aa		4.22	□□□□□ -1.73
YOP1	YPR028W	NNK1	P36003	928 aa		4.22	□□□□□ -1.73
YOP1	YPR028W	ELA1	P53861	379 aa	Predicted RBP	4.22	□□□□□ -1.73
YOP1	YPR028W	RIM11	P38615	370 aa		4.21	□□□□□ -1.74
YOP1	YPR028W	FOL2	P51601	243 aa	Known RBP	4.21	□□□□□ -1.74
YOP1	YPR028W	YGR045C	P53229	120 aa		4.21	□□□□□ -1.74
YOP1	YPR028W	CMR1	Q12510	522 aa	Known RBP	4.21	□□□□□ -1.74
YOP1	YPR028W	PNP1	Q05788	311 aa		4.2	□□□□□ -1.74
YOP1	YPR028W	PRP5	P21372	849 aa	Predicted RBP	4.19	□□□□□ -1.74
YOP1	YPR028W	CPS1	P27614	576 aa		4.19	□□□□□ -1.74
YOP1	YPR028W	AVO1	Q08236	1176 aa		4.19	□□□□□ -1.74
YOP1	YPR028W	PUS7	Q08647	676 aa	Known RBP	4.19	□□□□□ -1.74
YOP1	YPR028W	LSO1	Q3E827	93 aa		4.19	□□□□□ -1.74
YOP1	YPR028W	COB	P00163	385 aa		4.18	□□□□□ -1.74
YOP1	YPR028W	ECM2	P38241	364 aa	Known RBP	4.18	□□□□□ -1.74
YOP1	YPR028W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
YOP1	YPR028W	YML122C	Q03207	126 aa		4.17	□□□□□ -1.74
YOP1	YPR028W	TPP1	Q03796	238 aa		4.17	□□□□□ -1.74
YOP1	YPR028W	TAT2	P38967	592 aa		4.16	□□□□□ -1.74
YOP1	YPR028W	PUS9	Q12069	462 aa		4.16	□□□□□ -1.74
YOP1	YPR028W	DUR3	P33413	735 aa		4.15	□□□□□ -1.75
YOP1	YPR028W	ARL1	P38116	183 aa	Known RBP	4.15	□□□□□ -1.75
YOP1	YPR028W	TRM2	P33753	639 aa		4.14	□□□□□ -1.75
YOP1	YPR028W	SAM35	P14693	329 aa		4.13	□□□□□ -1.75
YOP1	YPR028W	YHL012W	P38709	493 aa		4.13	□□□□□ -1.75
YOP1	YPR028W	YDR132C	Q03900	495 aa		4.13	□□□□□ -1.75
YOP1	YPR028W	MDL2	P33311	773 aa		4.12	□□□□□ -1.75
YOP1	YPR028W	MSE1	P48525	536 aa		4.12	□□□□□ -1.75
YOP1	YPR028W	SPT20	P50875	604 aa		4.12	□□□□□ -1.75
YOP1	YPR028W	FUR4	P05316	633 aa	Known RBP	4.11	□□□□□ -1.75
YOP1	YPR028W	SLI1	P53304	468 aa		4.11	□□□□□ -1.75
YOP1	YPR028W	YOR352W	Q08816	343 aa		4.11	□□□□□ -1.75
YOP1	YPR028W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.1	□□□□□ -1.75
YOP1	YPR028W	TY1A-DR6	P0CX70	440 aa		4.1	□□□□□ -1.75
YOP1	YPR028W	TY1A-ER1	P0CX71	440 aa		4.1	□□□□□ -1.75
YOP1	YPR028W	TY1A-LR2	P0CX72	440 aa		4.1	□□□□□ -1.75
YOP1	YPR028W	TY1A-PL	P0CX73	440 aa		4.1	□□□□□ -1.75
YOP1	YPR028W	TY1A-JR1	P0CX74	440 aa		4.1	□□□□□ -1.75
YOP1	YPR028W	TY1A-LR3	P0CX75	440 aa		4.1	□□□□□ -1.75
YOP1	YPR028W	TY1A-ML2	P0CX76	440 aa		4.1	□□□□□ -1.75
YOP1	YPR028W	AIM26	P32858	118 aa		4.1	□□□□□ -1.75
YOP1	YPR028W	RSC4	Q02206	625 aa		4.1	□□□□□ -1.75
YOP1	YPR028W	TY1A-GR1	Q12085	440 aa		4.1	□□□□□ -1.75
YOP1	YPR028W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.1	□□□□□ -1.75
YOP1	YPR028W	TY1A-OL	Q92392	440 aa	Known RBP	4.1	□□□□□ -1.75
YOP1	YPR028W	SAP155	P43612	1002 aa		4.09	□□□□□ -1.75
YOP1	YPR028W	YML083C	Q04526	418 aa		4.09	□□□□□ -1.75
YOP1	YPR028W	NMD3	P38861	518 aa	Known RBP	4.08	□□□□□ -1.76
YOP1	YPR028W	MEF2	P39677	819 aa		4.08	□□□□□ -1.76
YOP1	YPR028W	ENV11	P53246	860 aa		4.08	□□□□□ -1.76
YOP1	YPR028W	GCN5	Q03330	439 aa		4.08	□□□□□ -1.76
YOP1	YPR028W	SGD1	Q06132	899 aa		4.08	□□□□□ -1.76
YOP1	YPR028W	YLR257W	Q06146	321 aa	Known RBP	4.08	□□□□□ -1.76
YOP1	YPR028W	RET1	P22276	1149 aa	Known RBP	4.07	□□□□□ -1.76
YOP1	YPR028W	LAM1	P38851	1228 aa		4.07	□□□□□ -1.76
YOP1	YPR028W	YAF9	P53930	226 aa		4.07	□□□□□ -1.76
YOP1	YPR028W	SRO9	P25567	434 aa	Known RBP	4.06	□□□□□ -1.76
YOP1	YPR028W	YKL077W	P36081	392 aa		4.06	□□□□□ -1.76
YOP1	YPR028W	YAR028W	P39548	234 aa		4.06	□□□□□ -1.76
YOP1	YPR028W	SLS1	P42900	643 aa		4.06	□□□□□ -1.76
YOP1	YPR028W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
YOP1	YPR028W	PMT7	Q06644	662 aa		4.06	□□□□□ -1.76
YOP1	YPR028W	BOL3	P39724	118 aa		4.05	□□□□□ -1.76
YOP1	YPR028W	SUN4	P53616	420 aa		4.05	□□□□□ -1.76
YOP1	YPR028W	UFD2	P54860	961 aa		4.05	□□□□□ -1.76
YOP1	YPR028W	CTF4	Q01454	927 aa		4.05	□□□□□ -1.76
YOP1	YPR028W	SPS1	P08458	490 aa		4.04	□□□□□ -1.76
YOP1	YPR028W	HCM1	P25364	564 aa		4.04	□□□□□ -1.76
YOP1	YPR028W	NUT1	P53114	1132 aa		4.04	□□□□□ -1.76
YOP1	YPR028W	HRK1	Q08732	759 aa	Known RBP	4.04	□□□□□ -1.76
YOP1	YPR028W	FLP1	P03870	423 aa		4.03	□□□□□ -1.76
YOP1	YPR028W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms