RNA–Protein interactions for RNA: YPR023C

EAF3, Transcript of Component of the Rpd3S histone deacetylase complex, yeast

Gene EAF3, Length 1,206 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EAF3	YPR023C	RFC5	P38251	354 aa		10.29	□□□□□ -0.76
EAF3	YPR023C	GSC2	P40989	1895 aa		10.28	□□□□□ -0.76
EAF3	YPR023C	DIT2	P21595	489 aa		10.28	□□□□□ -0.76
EAF3	YPR023C	ROX1	P25042	368 aa		10.28	□□□□□ -0.76
EAF3	YPR023C	BMH2	P34730	273 aa	Known RBP	10.28	□□□□□ -0.76
EAF3	YPR023C	CST26	P38226	397 aa		10.28	□□□□□ -0.76
EAF3	YPR023C	SNF7	P39929	240 aa	Known RBP	10.28	□□□□□ -0.76
EAF3	YPR023C	NIT1	P40447	199 aa		10.28	□□□□□ -0.76
EAF3	YPR023C	ALG2	P43636	503 aa		10.28	□□□□□ -0.76
EAF3	YPR023C	HAP5	Q02516	242 aa		10.28	□□□□□ -0.76
EAF3	YPR023C	PUS5	Q06244	254 aa		10.28	□□□□□ -0.76
EAF3	YPR023C	SKG3	Q06315	1026 aa		10.28	□□□□□ -0.76
EAF3	YPR023C	PEX19	Q07418	342 aa		10.28	□□□□□ -0.76
EAF3	YPR023C	TUB2	P02557	457 aa	Known RBP	10.27	□□□□□ -0.77
EAF3	YPR023C	RNR3	P21672	869 aa	Known RBP	10.27	□□□□□ -0.77
EAF3	YPR023C	MBR1	P23493	339 aa		10.27	□□□□□ -0.77
EAF3	YPR023C	RDS1	P25611	832 aa		10.27	□□□□□ -0.77
EAF3	YPR023C	RPL8B	P29453	256 aa	Known RBP	10.27	□□□□□ -0.77
EAF3	YPR023C	MAL33	P38157	468 aa		10.27	□□□□□ -0.77
EAF3	YPR023C	HSP82	P02829	709 aa	Known RBP	10.26	□□□□□ -0.77
EAF3	YPR023C	CBP3	P21560	335 aa		10.26	□□□□□ -0.77
EAF3	YPR023C	SPT21	P35209	758 aa		10.26	□□□□□ -0.77
EAF3	YPR023C	HYR1	P40581	163 aa	Known RBP	10.26	□□□□□ -0.77
EAF3	YPR023C	CIR1	P42940	261 aa		10.26	□□□□□ -0.77
EAF3	YPR023C	FOL1	P53848	824 aa		10.26	□□□□□ -0.77
EAF3	YPR023C	VPS30	Q02948	557 aa		10.26	□□□□□ -0.77
EAF3	YPR023C	MET6	P05694	767 aa	Known RBP	10.25	□□□□□ -0.77
EAF3	YPR023C	CDC6	P09119	513 aa		10.25	□□□□□ -0.77
EAF3	YPR023C	SRP54	P20424	541 aa	Known RBP	10.25	□□□□□ -0.77
EAF3	YPR023C	RXT2	P38255	430 aa		10.25	□□□□□ -0.77
EAF3	YPR023C	PCI8	P40512	444 aa		10.25	□□□□□ -0.77
EAF3	YPR023C	SNU71	P53207	620 aa	Known RBP	10.25	□□□□□ -0.77
EAF3	YPR023C	COG8	Q04632	607 aa		10.25	□□□□□ -0.77
EAF3	YPR023C	LAP2	Q10740	671 aa		10.25	□□□□□ -0.77
EAF3	YPR023C	NUC1	P08466	329 aa		10.24	□□□□□ -0.77
EAF3	YPR023C	SAM2	P19358	384 aa	Known RBP	10.24	□□□□□ -0.77
EAF3	YPR023C	VPS1	P21576	704 aa	Known RBP	10.24	□□□□□ -0.77
EAF3	YPR023C	SPB4	P25808	606 aa	Predicted RBP	10.24	□□□□□ -0.77
EAF3	YPR023C	TPS3	P38426	1054 aa	Known RBP	10.24	□□□□□ -0.77
EAF3	YPR023C	YDR341C	Q05506	607 aa	Known RBP	10.24	□□□□□ -0.77
EAF3	YPR023C	CSR2	Q12734	1121 aa		10.24	□□□□□ -0.77
EAF3	YPR023C	KEX1	P09620	729 aa		10.23	□□□□□ -0.77
EAF3	YPR023C	GAL2	P13181	574 aa		10.23	□□□□□ -0.77
EAF3	YPR023C	ARL1	P38116	183 aa	Known RBP	10.23	□□□□□ -0.77
EAF3	YPR023C	PEA2	P40091	420 aa		10.23	□□□□□ -0.77
EAF3	YPR023C	PIL1	P53252	339 aa	Known RBP	10.23	□□□□□ -0.77
EAF3	YPR023C	GDE1	Q02979	1223 aa		10.23	□□□□□ -0.77
EAF3	YPR023C	DSE3	Q08729	430 aa		10.23	□□□□□ -0.77
EAF3	YPR023C	DCS2	Q12123	353 aa		10.23	□□□□□ -0.77
EAF3	YPR023C	CLF1	Q12309	687 aa	Predicted RBP	10.23	□□□□□ -0.77
EAF3	YPR023C	TUS1	Q06412	1307 aa		10.23	□□□□□ -0.77
EAF3	YPR023C	CIT1	P00890	479 aa		10.22	□□□□□ -0.77
EAF3	YPR023C	PGI1	P12709	554 aa	Known RBP	10.22	□□□□□ -0.77
EAF3	YPR023C	KRS1	P15180	591 aa	Known RBP	10.22	□□□□□ -0.77
EAF3	YPR023C	STI1	P15705	589 aa	Known RBP RIP-Chip data	10.22	□□□□□ -0.77	not detected
EAF3	YPR023C	TIF4631	P39935	952 aa	Known RBP	10.22	□□□□□ -0.77
EAF3	YPR023C	UBP9	P39967	754 aa		10.22	□□□□□ -0.77
EAF3	YPR023C	VHR2	P40041	505 aa		10.22	□□□□□ -0.77
EAF3	YPR023C	MDM1	Q01846	1127 aa		10.22	□□□□□ -0.77
EAF3	YPR023C	APC11	Q12157	165 aa		10.22	□□□□□ -0.77
EAF3	YPR023C	FRS2	P15625	503 aa	Known RBP	10.21	□□□□□ -0.77
EAF3	YPR023C	ELM1	P32801	640 aa		10.21	□□□□□ -0.77
EAF3	YPR023C	VPS45	P38932	577 aa		10.21	□□□□□ -0.77
EAF3	YPR023C	PES4	P39684	611 aa		10.21	□□□□□ -0.77
EAF3	YPR023C	ACA1	P39970	489 aa		10.21	□□□□□ -0.77
EAF3	YPR023C	CWC15	Q03772	175 aa	Known RBP	10.21	□□□□□ -0.77
EAF3	YPR023C	GIS4	Q04233	774 aa		10.21	□□□□□ -0.77
EAF3	YPR023C	GET3	Q12154	354 aa	Known RBP	10.21	□□□□□ -0.77
EAF3	YPR023C	TOM71	P38825	639 aa	Known RBP	10.2	□□□□□ -0.78
EAF3	YPR023C	PNT1	P38969	423 aa		10.2	□□□□□ -0.78
EAF3	YPR023C	RVS167	P39743	482 aa	Known RBP	10.2	□□□□□ -0.78
EAF3	YPR023C	CCT5	P40413	562 aa	Known RBP	10.2	□□□□□ -0.78
EAF3	YPR023C	SUE1	Q06524	206 aa		10.2	□□□□□ -0.78
EAF3	YPR023C	CLC1	P17891	233 aa		10.19	□□□□□ -0.78
EAF3	YPR023C	DID4	P36108	232 aa		10.19	□□□□□ -0.78
EAF3	YPR023C	YGL138C	P53122	345 aa		10.19	□□□□□ -0.78
EAF3	YPR023C	PEX29	Q03370	554 aa		10.19	□□□□□ -0.78
EAF3	YPR023C	AIM44	Q99299	758 aa		10.19	□□□□□ -0.78
EAF3	YPR023C	ASF1	P32447	279 aa		10.18	□□□□□ -0.78
EAF3	YPR023C	RSM25	P40496	264 aa		10.18	□□□□□ -0.78
EAF3	YPR023C	NAF1	P53919	492 aa	Known RBP	10.18	□□□□□ -0.78
EAF3	YPR023C	CSC1	Q06538	782 aa		10.18	□□□□□ -0.78
EAF3	YPR023C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.18	□□□□□ -0.78	not detected
EAF3	YPR023C	CEX1	Q12453	761 aa		10.18	□□□□□ -0.78
EAF3	YPR023C	HXK1	P04806	485 aa	Known RBP	10.17	□□□□□ -0.78
EAF3	YPR023C	ERG12	P07277	443 aa		10.17	□□□□□ -0.78
EAF3	YPR023C	RGP1	P16664	663 aa		10.17	□□□□□ -0.78
EAF3	YPR023C	RPN12	P32496	274 aa		10.17	□□□□□ -0.78
EAF3	YPR023C	PEX21	P50091	288 aa		10.17	□□□□□ -0.78
EAF3	YPR023C	ASE1	P50275	885 aa		10.17	□□□□□ -0.78
EAF3	YPR023C	DDP1	Q99321	188 aa	Known RBP	10.17	□□□□□ -0.78
EAF3	YPR023C	MAK11	P20484	414 aa	Known RBP	10.16	□□□□□ -0.78
EAF3	YPR023C	SSA4	P22202	642 aa	Known RBP	10.16	□□□□□ -0.78
EAF3	YPR023C	URA1	P28272	314 aa	Predicted RBP	10.16	□□□□□ -0.78
EAF3	YPR023C	RFT1	P38206	574 aa	Predicted RBP	10.16	□□□□□ -0.78
EAF3	YPR023C	CCT3	P39077	534 aa	Known RBP	10.16	□□□□□ -0.78
EAF3	YPR023C	KRE33	P53914	1056 aa	Known RBP	10.16	□□□□□ -0.78
EAF3	YPR023C	SMD2	Q06217	110 aa	Known RBP	10.16	□□□□□ -0.78
EAF3	YPR023C	UTP4	Q06679	776 aa	Known RBP	10.16	□□□□□ -0.78
EAF3	YPR023C	GIN4	Q12263	1142 aa		10.16	□□□□□ -0.78

Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms