RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W HSV2P50079 448 aaPredicted RBP7.88□□□□□ -1.15
CIT3YPR001W TGL2P54857 326 aa7.88□□□□□ -1.15
CIT3YPR001W ULP1Q02724 621 aa7.88□□□□□ -1.15
CIT3YPR001W PML39Q03760 334 aa7.88□□□□□ -1.15
CIT3YPR001W MRL1Q06815 381 aa7.88□□□□□ -1.15
CIT3YPR001W FAP7Q12055 197 aaPredicted RBP7.88□□□□□ -1.15
CIT3YPR001W TPD3P31383 635 aa7.87□□□□□ -1.15
CIT3YPR001W TRZ1P36159 838 aaPredicted RBP7.87□□□□□ -1.15
CIT3YPR001W YNL193WP53870 558 aa7.87□□□□□ -1.15
CIT3YPR001W KRE33P53914 1056 aaKnown RBP7.87□□□□□ -1.15
CIT3YPR001W MDM1Q01846 1127 aa7.87□□□□□ -1.15
CIT3YPR001W SBA1P28707 216 aaKnown RBP7.87□□□□□ -1.15
CIT3YPR001W EAP1P36041 632 aaKnown RBP7.87□□□□□ -1.15
CIT3YPR001W IRS4P36115 615 aaKnown RBP7.87□□□□□ -1.15
CIT3YPR001W TBS1P38114 1094 aa7.87□□□□□ -1.15
CIT3YPR001W LDH1P38139 375 aa7.87□□□□□ -1.15
CIT3YPR001W YBR071WP38243 211 aa7.87□□□□□ -1.15
CIT3YPR001W RRD1P40454 393 aaKnown RBP7.87□□□□□ -1.15
CIT3YPR001W PEX14P53112 341 aa7.87□□□□□ -1.15
CIT3YPR001W GPG1P53130 126 aa7.87□□□□□ -1.15
CIT3YPR001W UTP8P53276 713 aaKnown RBP7.87□□□□□ -1.15
CIT3YPR001W RRI2Q12348 645 aa7.87□□□□□ -1.15
CIT3YPR001W MPD2Q99316 277 aa7.87□□□□□ -1.15
CIT3YPR001W MCM1P11746 286 aa7.86□□□□□ -1.15
CIT3YPR001W NPR1P22211 790 aa7.86□□□□□ -1.15
CIT3YPR001W MRS6P32864 603 aaKnown RBP7.86□□□□□ -1.15
CIT3YPR001W VBA5P36172 582 aa7.86□□□□□ -1.15
CIT3YPR001W FIR1P40020 876 aa7.86□□□□□ -1.15
CIT3YPR001W PSY2P40164 858 aa7.86□□□□□ -1.15
CIT3YPR001W HOS4P40480 1083 aa7.86□□□□□ -1.15
CIT3YPR001W MPH2P0CD99 609 aa7.85□□□□□ -1.15
CIT3YPR001W BET3P36149 193 aa7.85□□□□□ -1.15
CIT3YPR001W PBY1P38254 753 aa7.85□□□□□ -1.15
CIT3YPR001W RGD2P43556 714 aa7.85□□□□□ -1.15
CIT3YPR001W SPC105P53148 917 aa7.85□□□□□ -1.15
CIT3YPR001W ELP4Q02884 456 aaKnown RBP7.85□□□□□ -1.15
CIT3YPR001W ISU1Q03020 165 aa7.85□□□□□ -1.15
CIT3YPR001W YDL124WQ07551 312 aaKnown RBP7.85□□□□□ -1.15
CIT3YPR001W TIF6Q12522 245 aaKnown RBP7.85□□□□□ -1.15
CIT3YPR001W DAT1P13483 248 aaKnown RBP7.84□□□□□ -1.15
CIT3YPR001W EUG1P32474 517 aa7.84□□□□□ -1.15
CIT3YPR001W GDH3P39708 457 aa7.84□□□□□ -1.15
CIT3YPR001W PIP2P52960 996 aa7.84□□□□□ -1.15
CIT3YPR001W YNL034WP53963 612 aa7.84□□□□□ -1.15
CIT3YPR001W YNL018CP53976 612 aa7.84□□□□□ -1.15
CIT3YPR001W SSH4P32343 579 aa7.83□□□□□ -1.16
CIT3YPR001W ABD1P32783 436 aaPredicted RBP7.83□□□□□ -1.16
CIT3YPR001W PTH2P34222 208 aa7.83□□□□□ -1.16
CIT3YPR001W YAP1801P38856 637 aa7.83□□□□□ -1.16
CIT3YPR001W MAL11P53048 616 aa7.83□□□□□ -1.16
CIT3YPR001W GIC2Q06648 383 aa7.83□□□□□ -1.16
CIT3YPR001W TRE2Q08693 809 aa7.83□□□□□ -1.16
CIT3YPR001W TRP2P00899 507 aaKnown RBP7.82□□□□□ -1.16
CIT3YPR001W HSC82P15108 705 aaKnown RBP7.82□□□□□ -1.16
CIT3YPR001W PAT1P25644 796 aaKnown RBP7.82□□□□□ -1.16
CIT3YPR001W SEA4P38164 1038 aa7.82□□□□□ -1.16
CIT3YPR001W DYS1P38791 387 aa7.82□□□□□ -1.16
CIT3YPR001W RRN7P40992 514 aa7.82□□□□□ -1.16
CIT3YPR001W XKS1P42826 600 aa7.82□□□□□ -1.16
CIT3YPR001W GNP1P48813 663 aa7.82□□□□□ -1.16
CIT3YPR001W SDA1P53313 767 aaKnown RBP7.82□□□□□ -1.16
CIT3YPR001W YPQ2Q06328 317 aa7.82□□□□□ -1.16
CIT3YPR001W MSN1P22148 382 aa7.81□□□□□ -1.16
CIT3YPR001W JNM1P36224 373 aa7.81□□□□□ -1.16
CIT3YPR001W MAL31P38156 614 aa7.81□□□□□ -1.16
CIT3YPR001W ALR2P43553 858 aa7.81□□□□□ -1.16
CIT3YPR001W MET14Q02196 202 aa7.81□□□□□ -1.16
CIT3YPR001W BUD20Q08004 166 aaPredicted RBP7.81□□□□□ -1.16
CIT3YPR001W PRP9P19736 530 aaKnown RBP7.81□□□□□ -1.16
CIT3YPR001W LYP1P32487 611 aa7.81□□□□□ -1.16
CIT3YPR001W MON1P53129 644 aa7.81□□□□□ -1.16
CIT3YPR001W SNU66Q12420 587 aaPredicted RBP7.81□□□□□ -1.16
CIT3YPR001W RTP1Q12751 981 aa7.81□□□□□ -1.16
CIT3YPR001W INH1P01097 85 aa7.8□□□□□ -1.16
CIT3YPR001W PLC1P32383 869 aa7.8□□□□□ -1.16
CIT3YPR001W FBP26P32604 452 aa7.79□□□□□ -1.16
CIT3YPR001W BAP2P38084 609 aa7.79□□□□□ -1.16
CIT3YPR001W RPS0BP46654 252 aaKnown RBP7.79□□□□□ -1.16
CIT3YPR001W NUT1P53114 1132 aa7.79□□□□□ -1.16
CIT3YPR001W HFD1Q04458 532 aa7.79□□□□□ -1.16
CIT3YPR001W UTP4Q06679 776 aaKnown RBP7.79□□□□□ -1.16
CIT3YPR001W YLR001CQ07895 862 aa7.79□□□□□ -1.16
CIT3YPR001W OPI1P21957 404 aa7.78□□□□□ -1.16
CIT3YPR001W MEF1P25039 761 aa7.78□□□□□ -1.16
CIT3YPR001W GFD2P25370 566 aaKnown RBP7.78□□□□□ -1.16
CIT3YPR001W TFC4P33339 1025 aa7.78□□□□□ -1.16
CIT3YPR001W SQT1P35184 431 aa7.78□□□□□ -1.16
CIT3YPR001W HSE1P38753 452 aa7.78□□□□□ -1.16
CIT3YPR001W APP1P53933 587 aa7.78□□□□□ -1.16
CIT3YPR001W YLR225CQ05948 407 aaKnown RBP7.78□□□□□ -1.16
CIT3YPR001W PSR2Q07949 397 aa7.78□□□□□ -1.16
CIT3YPR001W RRP6Q12149 733 aaKnown RBP7.78□□□□□ -1.16
CIT3YPR001W WTM2Q12206 467 aa7.78□□□□□ -1.16
CIT3YPR001W MDM12Q92328 271 aa7.78□□□□□ -1.16
CIT3YPR001W FOB1O13329 566 aa7.77□□□□□ -1.17
CIT3YPR001W GAL1P04385 528 aa7.77□□□□□ -1.17
CIT3YPR001W PUF4P25339 888 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
CIT3YPR001W PTP2P29461 750 aa7.77□□□□□ -1.17
CIT3YPR001W TYS1P36421 394 aaKnown RBP7.77□□□□□ -1.17
CIT3YPR001W ECM2P38241 364 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms