RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W DPH6Q12429 685 aa4.21□□□□□ -1.74
MSD1YPL104W FUR4P05316 633 aaKnown RBP4.2□□□□□ -1.74
MSD1YPL104W MGE1P38523 228 aa4.2□□□□□ -1.74
MSD1YPL104W SOH1P38633 127 aa4.2□□□□□ -1.74
MSD1YPL104W SNF7P39929 240 aaKnown RBP4.2□□□□□ -1.74
MSD1YPL104W MID1P41821 548 aa4.2□□□□□ -1.74
MSD1YPL104W PIB2P53191 635 aa4.2□□□□□ -1.74
MSD1YPL104W SRC1Q03707 834 aa4.2□□□□□ -1.74
MSD1YPL104W SYF1Q04048 859 aaPredicted RBP4.2□□□□□ -1.74
MSD1YPL104W NUT2Q06213 157 aa4.2□□□□□ -1.74
MSD1YPL104W THI3Q07471 609 aa4.2□□□□□ -1.74
MSD1YPL104W STB3Q12427 513 aa4.2□□□□□ -1.74
MSD1YPL104W MGM1P32266 881 aa4.2□□□□□ -1.74
MSD1YPL104W NUD1P32336 851 aa4.2□□□□□ -1.74
MSD1YPL104W AIM9P40053 627 aaKnown RBP4.2□□□□□ -1.74
MSD1YPL104W QDR1P40475 563 aa4.2□□□□□ -1.74
MSD1YPL104W DJP1P40564 432 aa4.2□□□□□ -1.74
MSD1YPL104W KRI1P42846 591 aaKnown RBP4.2□□□□□ -1.74
MSD1YPL104W IRC3Q06683 689 aa4.2□□□□□ -1.74
MSD1YPL104W MPC54Q08550 464 aa4.2□□□□□ -1.74
MSD1YPL104W WSC3Q12215 556 aa4.2□□□□□ -1.74
MSD1YPL104W FRT1Q99332 602 aa4.2□□□□□ -1.74
MSD1YPL104W TEC1P18412 486 aa4.19□□□□□ -1.74
MSD1YPL104W OPI1P21957 404 aa4.19□□□□□ -1.74
MSD1YPL104W ROX1P25042 368 aa4.19□□□□□ -1.74
MSD1YPL104W GUT2P32191 649 aa4.19□□□□□ -1.74
MSD1YPL104W MET1P36150 593 aa4.19□□□□□ -1.74
MSD1YPL104W UGA2P38067 497 aa4.19□□□□□ -1.74
MSD1YPL104W ICP55P40051 511 aa4.19□□□□□ -1.74
MSD1YPL104W YMR147WP40218 223 aaKnown RBP4.19□□□□□ -1.74
MSD1YPL104W ATG3P40344 310 aa4.19□□□□□ -1.74
MSD1YPL104W SPO22P40511 975 aa4.19□□□□□ -1.74
MSD1YPL104W NPA3P47122 385 aa4.19□□□□□ -1.74
MSD1YPL104W ENP2P48234 707 aaKnown RBP4.19□□□□□ -1.74
MSD1YPL104W CWH41P53008 833 aa4.19□□□□□ -1.74
MSD1YPL104W SAS4Q04003 481 aa4.19□□□□□ -1.74
MSD1YPL104W VPS20Q04272 221 aa4.19□□□□□ -1.74
MSD1YPL104W MAG2Q06436 670 aaKnown RBP4.19□□□□□ -1.74
MSD1YPL104W FRA1Q07825 749 aa4.19□□□□□ -1.74
MSD1YPL104W PFF1P38244 976 aa4.18□□□□□ -1.74
MSD1YPL104W HAL5P38970 855 aaKnown RBP4.18□□□□□ -1.74
MSD1YPL104W NUG1P40010 520 aaKnown RBP4.18□□□□□ -1.74
MSD1YPL104W FIG4P42837 879 aa4.18□□□□□ -1.74
MSD1YPL104W DOS2P54858 310 aa4.18□□□□□ -1.74
MSD1YPL104W ISU2Q12056 156 aa4.18□□□□□ -1.74
MSD1YPL104W CLC1P17891 233 aa4.18□□□□□ -1.74
MSD1YPL104W MSP1P28737 362 aa4.18□□□□□ -1.74
MSD1YPL104W MET4P32389 672 aa4.18□□□□□ -1.74
MSD1YPL104W FRD1P32614 470 aaKnown RBP4.18□□□□□ -1.74
MSD1YPL104W YJR107WP47145 328 aa4.18□□□□□ -1.74
MSD1YPL104W TUB4P53378 473 aa4.18□□□□□ -1.74
MSD1YPL104W YAF9P53930 226 aa4.18□□□□□ -1.74
MSD1YPL104W LAM4P38800 1345 aa4.17□□□□□ -1.74
MSD1YPL104W NPL4P33755 580 aa4.17□□□□□ -1.74
MSD1YPL104W SKI2P35207 1287 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
MSD1YPL104W CIC1P38779 376 aaKnown RBP4.17□□□□□ -1.74
MSD1YPL104W IRC8P47046 822 aa4.17□□□□□ -1.74
MSD1YPL104W ACF4P47129 309 aa4.17□□□□□ -1.74
MSD1YPL104W RPT4P53549 437 aaKnown RBP4.17□□□□□ -1.74
MSD1YPL104W FAR11P53917 953 aa4.17□□□□□ -1.74
MSD1YPL104W ERO1Q03103 563 aa4.17□□□□□ -1.74
MSD1YPL104W PML39Q03760 334 aa4.17□□□□□ -1.74
MSD1YPL104W UBX2Q04228 584 aa4.17□□□□□ -1.74
MSD1YPL104W SSF2Q12153 453 aaPredicted RBP4.17□□□□□ -1.74
MSD1YPL104W TAH18Q12181 623 aa4.17□□□□□ -1.74
MSD1YPL104W YOL098CQ12496 1037 aa4.17□□□□□ -1.74
MSD1YPL104W BIK1P11709 440 aa4.16□□□□□ -1.74
MSD1YPL104W PEP3P27801 918 aa4.16□□□□□ -1.74
MSD1YPL104W SMY1P32364 656 aaKnown RBP4.16□□□□□ -1.74
MSD1YPL104W SPL2P38839 148 aa4.16□□□□□ -1.74
MSD1YPL104W VAC8P39968 578 aa4.16□□□□□ -1.74
MSD1YPL104W YIR042CP40586 236 aa4.16□□□□□ -1.74
MSD1YPL104W HST1P53685 503 aa4.16□□□□□ -1.74
MSD1YPL104W IRC4Q03036 179 aa4.16□□□□□ -1.74
MSD1YPL104W INM2Q05533 292 aa4.16□□□□□ -1.74
MSD1YPL104W YPR084WQ06821 456 aa4.16□□□□□ -1.74
MSD1YPL104W TSC13Q99190 310 aa4.16□□□□□ -1.74
MSD1YPL104W CYB2P00175 591 aa4.16□□□□□ -1.74
MSD1YPL104W RPL19AP0CX82 189 aaKnown RBP4.16□□□□□ -1.74
MSD1YPL104W RPL19BP0CX83 189 aaPredicted RBP4.16□□□□□ -1.74
MSD1YPL104W CAF20P12962 161 aaKnown RBP4.16□□□□□ -1.74
MSD1YPL104W VAN1P23642 535 aa4.16□□□□□ -1.74
MSD1YPL104W KRE2P27809 442 aa4.16□□□□□ -1.74
MSD1YPL104W BDH2P39713 417 aa4.16□□□□□ -1.74
MSD1YPL104W RPA14P50106 137 aa4.16□□□□□ -1.74
MSD1YPL104W MSN5P52918 1224 aa4.16□□□□□ -1.74
MSD1YPL104W RNH70P53331 553 aa4.16□□□□□ -1.74
MSD1YPL104W NMA111P53920 997 aa4.16□□□□□ -1.74
MSD1YPL104W ARP5P53946 755 aa4.16□□□□□ -1.74
MSD1YPL104W HAP5Q02516 242 aa4.16□□□□□ -1.74
MSD1YPL104W PEX29Q03370 554 aa4.16□□□□□ -1.74
MSD1YPL104W COG8Q04632 607 aa4.16□□□□□ -1.74
MSD1YPL104W PSF3Q12146 194 aa4.16□□□□□ -1.74
MSD1YPL104W MNL2Q12205 849 aa4.16□□□□□ -1.74
MSD1YPL104W PGA3Q12746 312 aaKnown RBP4.16□□□□□ -1.74
MSD1YPL104W FLO1P32768 1537 aa4.16□□□□□ -1.74
MSD1YPL104W PDR1P12383 1068 aa4.15□□□□□ -1.74
MSD1YPL104W EAP1P36041 632 aaKnown RBP4.15□□□□□ -1.74
MSD1YPL104W GRX7P38068 203 aa4.15□□□□□ -1.74
MSD1YPL104W RRP8P38961 392 aaKnown RBP4.15□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms