RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C HXT8P40886 569 aa6.47□□□□□ -1.37
SNF8YPL002C TY4A-HQ6Q5P6 413 aa6.47□□□□□ -1.37
SNF8YPL002C RPB10P22139 70 aa6.46□□□□□ -1.38
SNF8YPL002C RGD2P43556 714 aa6.46□□□□□ -1.38
SNF8YPL002C MAK10Q02197 733 aa6.46□□□□□ -1.38
SNF8YPL002C APC11Q12157 165 aa6.46□□□□□ -1.38
SNF8YPL002C INP51P40559 946 aaKnown RBP6.45□□□□□ -1.38
SNF8YPL002C SUT1P53032 299 aaKnown RBP6.45□□□□□ -1.38
SNF8YPL002C MAC1P35192 417 aa6.44□□□□□ -1.38
SNF8YPL002C TFA2P36145 328 aa6.44□□□□□ -1.38
SNF8YPL002C FIR1P40020 876 aa6.44□□□□□ -1.38
SNF8YPL002C TY1A-NL1Q12391 440 aaKnown RBP6.44□□□□□ -1.38
SNF8YPL002C ARO1P08566 1588 aaKnown RBP6.44□□□□□ -1.38
SNF8YPL002C BNR1P40450 1375 aa6.44□□□□□ -1.38
SNF8YPL002C RRN6P32786 894 aa6.43□□□□□ -1.38
SNF8YPL002C AIM46P38885 310 aa6.43□□□□□ -1.38
SNF8YPL002C ALD3P54114 506 aa6.43□□□□□ -1.38
SNF8YPL002C URN1Q06525 465 aaKnown RBP6.43□□□□□ -1.38
SNF8YPL002C GLT1Q12680 2145 aaKnown RBP6.43□□□□□ -1.38
SNF8YPL002C CHC1P22137 1653 aaKnown RBP6.42□□□□□ -1.38
SNF8YPL002C SEC7P11075 2009 aaKnown RBP6.42□□□□□ -1.38
SNF8YPL002C BIO5P53744 561 aaKnown RBP6.42□□□□□ -1.38
SNF8YPL002C SUB2Q07478 446 aaKnown RBP6.42□□□□□ -1.38
SNF8YPL002C LSO1Q3E827 93 aa6.42□□□□□ -1.38
SNF8YPL002C RSC6P25632 483 aa6.41□□□□□ -1.38
SNF8YPL002C PAN5P38787 379 aa6.41□□□□□ -1.38
SNF8YPL002C BOL3P39724 118 aa6.41□□□□□ -1.38
SNF8YPL002C NTA1P40354 457 aa6.41□□□□□ -1.38
SNF8YPL002C INP52P50942 1183 aa6.41□□□□□ -1.38
SNF8YPL002C OMA1P36163 345 aa6.4□□□□□ -1.38
SNF8YPL002C YBR287WP38355 427 aa6.4□□□□□ -1.38
SNF8YPL002C SOG2Q08817 791 aa6.4□□□□□ -1.38
SNF8YPL002C TIF6Q12522 245 aaKnown RBP6.4□□□□□ -1.38
SNF8YPL002C FUS1P11710 512 aa6.39□□□□□ -1.39
SNF8YPL002C COQ2P32378 372 aa6.39□□□□□ -1.39
SNF8YPL002C RAD55P38953 406 aa6.39□□□□□ -1.39
SNF8YPL002C DSE4P53753 1117 aa6.39□□□□□ -1.39
SNF8YPL002C TAF7Q05021 590 aa6.39□□□□□ -1.39
SNF8YPL002C YLR122CQ12312 125 aa6.39□□□□□ -1.39
SNF8YPL002C GUP1P53154 560 aa6.38□□□□□ -1.39
SNF8YPL002C TY3B-GQ99315 1547 aa6.37□□□□□ -1.39
SNF8YPL002C TRP3P00937 484 aa6.37□□□□□ -1.39
SNF8YPL002C FUR4P05316 633 aaKnown RBP6.37□□□□□ -1.39
SNF8YPL002C YKR073CP36153 106 aa6.37□□□□□ -1.39
SNF8YPL002C REC8Q12188 680 aa6.37□□□□□ -1.39
SNF8YPL002C USO1P25386 1790 aa6.36□□□□□ -1.39
SNF8YPL002C NAM7P30771 971 aaKnown RBP6.36□□□□□ -1.39
SNF8YPL002C IRS4P36115 615 aaKnown RBP6.36□□□□□ -1.39
SNF8YPL002C KAE1P36132 386 aa6.36□□□□□ -1.39
SNF8YPL002C PSY2P40164 858 aa6.36□□□□□ -1.39
SNF8YPL002C RLF2Q12495 606 aa6.36□□□□□ -1.39
SNF8YPL002C SAF1P38352 637 aa6.35□□□□□ -1.39
SNF8YPL002C AKR1P39010 764 aa6.35□□□□□ -1.39
SNF8YPL002C POL5P39985 1022 aaKnown RBP6.35□□□□□ -1.39
SNF8YPL002C LEM3P42838 414 aa6.35□□□□□ -1.39
SNF8YPL002C SMC1P32908 1225 aa6.34□□□□□ -1.39
SNF8YPL002C HVG1P0CE11 249 aa6.33□□□□□ -1.4
SNF8YPL002C PYC2P32327 1180 aaKnown RBP6.33□□□□□ -1.4
SNF8YPL002C YJR124CP47159 448 aa6.33□□□□□ -1.4
SNF8YPL002C YNR065CP53751 1116 aa6.33□□□□□ -1.4
SNF8YPL002C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SNF8YPL002C MED7Q08278 222 aa6.33□□□□□ -1.4
SNF8YPL002C NEO1P40527 1151 aa6.32□□□□□ -1.4
SNF8YPL002C SPO71Q03868 1245 aa6.32□□□□□ -1.4
SNF8YPL002C GLO4Q12320 285 aa6.32□□□□□ -1.4
SNF8YPL002C MAE1P36013 669 aaKnown RBP6.31□□□□□ -1.4
SNF8YPL002C YGR130CP53278 816 aa6.31□□□□□ -1.4
SNF8YPL002C NCE103P53615 221 aa6.31□□□□□ -1.4
SNF8YPL002C HAS1Q03532 505 aaKnown RBP6.31□□□□□ -1.4
SNF8YPL002C ELG1Q12050 791 aa6.31□□□□□ -1.4
SNF8YPL002C YSP2Q06681 1438 aa6.31□□□□□ -1.4
SNF8YPL002C CHS2P14180 963 aa6.3□□□□□ -1.4
SNF8YPL002C ERS1P17261 260 aa6.3□□□□□ -1.4
SNF8YPL002C TOS1P38288 455 aa6.3□□□□□ -1.4
SNF8YPL002C THI12P42883 340 aa6.3□□□□□ -1.4
SNF8YPL002C THI5P43534 340 aa6.3□□□□□ -1.4
SNF8YPL002C THI11P47183 340 aa6.3□□□□□ -1.4
SNF8YPL002C THI13Q07748 340 aa6.3□□□□□ -1.4
SNF8YPL002C CAT8P39113 1433 aa6.3□□□□□ -1.4
SNF8YPL002C GLO3P38682 493 aaKnown RBP6.29□□□□□ -1.4
SNF8YPL002C CTH1P47976 325 aa6.29□□□□□ -1.4
SNF8YPL002C CTR9P89105 1077 aa6.29□□□□□ -1.4
SNF8YPL002C KAR5Q04746 504 aa6.28□□□□□ -1.4
SNF8YPL002C COBP00163 385 aa6.27□□□□□ -1.41
SNF8YPL002C QDR1P40475 563 aa6.27□□□□□ -1.41
SNF8YPL002C KIP3P53086 805 aaKnown RBP6.27□□□□□ -1.41
SNF8YPL002C LIP5P32875 414 aa6.26□□□□□ -1.41
SNF8YPL002C FET4P40988 552 aa6.26□□□□□ -1.41
SNF8YPL002C PUB1P32588 453 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41 RIP-Chip
SNF8YPL002C IPL1P38991 367 aa6.25□□□□□ -1.41
SNF8YPL002C SPO74P45819 413 aa6.25□□□□□ -1.41
SNF8YPL002C RPL34AP87262 121 aaPredicted RBP6.25□□□□□ -1.41
SNF8YPL002C BRE4Q07660 1125 aa6.25□□□□□ -1.41
SNF8YPL002C TY1B-NL2Q99337 1749 aaKnown RBP6.25□□□□□ -1.41
SNF8YPL002C CYC7P00045 113 aa6.24□□□□□ -1.41
SNF8YPL002C DUR3P33413 735 aa6.23□□□□□ -1.41
SNF8YPL002C ATG1P53104 897 aa6.23□□□□□ -1.41
SNF8YPL002C UFD2P54860 961 aa6.23□□□□□ -1.41
SNF8YPL002C RSC4Q02206 625 aa6.23□□□□□ -1.41
SNF8YPL002C MAG2Q06436 670 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms