RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP2YOR124C SAM3Q08986 587 aa2.34□□□□□ -2.04
UBP2YOR124C FLO1P32768 1537 aa2.34□□□□□ -2.04
UBP2YOR124C RDS1P25611 832 aa2.33□□□□□ -2.04
UBP2YOR124C MNR2P35724 969 aa2.33□□□□□ -2.04
UBP2YOR124C MCX1P38323 520 aaPredicted RBP2.33□□□□□ -2.04
UBP2YOR124C TPS3P38426 1054 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C YNG2P38806 282 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C MRX1P40050 688 aa2.33□□□□□ -2.04
UBP2YOR124C YIL001WP40560 513 aa2.33□□□□□ -2.04
UBP2YOR124C ARP5P53946 755 aa2.33□□□□□ -2.04
UBP2YOR124C NGL3Q03210 505 aa2.33□□□□□ -2.04
UBP2YOR124C YOR389WQ08912 624 aa2.33□□□□□ -2.04
UBP2YOR124C TYW1Q08960 810 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C TOM70P07213 617 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C PSE1P32337 1089 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C CNS1P33313 385 aa2.33□□□□□ -2.04
UBP2YOR124C AKL1P38080 1108 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C KTR3P38130 404 aaPredicted RBP2.33□□□□□ -2.04
UBP2YOR124C SIP5P40210 489 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C RSC8P43609 557 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C NNF2P53253 936 aa2.33□□□□□ -2.04
UBP2YOR124C YDR338CQ05497 695 aa2.33□□□□□ -2.04
UBP2YOR124C YCG1Q06680 1035 aa2.33□□□□□ -2.04
UBP2YOR124C GET4Q12125 312 aa2.33□□□□□ -2.04
UBP2YOR124C GIN4Q12263 1142 aa2.33□□□□□ -2.04
UBP2YOR124C LEU2P04173 364 aaPredicted RBP2.33□□□□□ -2.04
UBP2YOR124C PBS2P08018 668 aa2.33□□□□□ -2.04
UBP2YOR124C KRS1P15180 591 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C VMA1P17255 1071 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C DPH5P32469 300 aaPredicted RBP2.33□□□□□ -2.04
UBP2YOR124C CSE4P36012 229 aa2.33□□□□□ -2.04
UBP2YOR124C YKT6P36015 200 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C ECM21P38167 1117 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C YJR039WP47107 1121 aa2.33□□□□□ -2.04
UBP2YOR124C CAF130P53280 1122 aaPredicted RBP2.33□□□□□ -2.04
UBP2YOR124C CMS1Q07897 291 aaKnown RBP2.33□□□□□ -2.04
UBP2YOR124C APL4Q12028 832 aa2.33□□□□□ -2.04
UBP2YOR124C HMI1Q12039 706 aa2.33□□□□□ -2.04
UBP2YOR124C RPC82P32349 654 aa2.32□□□□□ -2.04
UBP2YOR124C NIP100P33420 868 aa2.32□□□□□ -2.04
UBP2YOR124C DID4P36108 232 aa2.32□□□□□ -2.04
UBP2YOR124C RFC5P38251 354 aa2.32□□□□□ -2.04
UBP2YOR124C BCD1P38772 366 aa2.32□□□□□ -2.04
UBP2YOR124C SPO1P53541 631 aa2.32□□□□□ -2.04
UBP2YOR124C YOL036WQ08206 761 aa2.32□□□□□ -2.04
UBP2YOR124C LDB19Q12502 818 aa2.32□□□□□ -2.04
UBP2YOR124C FLO11P08640 1367 aa2.32□□□□□ -2.04
UBP2YOR124C COQ4O13525 335 aa2.32□□□□□ -2.04
UBP2YOR124C TAL1P15019 335 aaKnown RBP2.32□□□□□ -2.04
UBP2YOR124C PSO2P30620 661 aa2.32□□□□□ -2.04
UBP2YOR124C EAP1P36041 632 aaKnown RBP2.32□□□□□ -2.04
UBP2YOR124C EFM2P38347 419 aa2.32□□□□□ -2.04
UBP2YOR124C MRPS35P53292 345 aa2.32□□□□□ -2.04
UBP2YOR124C TMA64Q04600 565 aaKnown RBP2.32□□□□□ -2.04
UBP2YOR124C RSA3Q05942 220 aaKnown RBP2.32□□□□□ -2.04
UBP2YOR124C BRE1Q07457 700 aaKnown RBP2.32□□□□□ -2.04
UBP2YOR124C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
UBP2YOR124C RPB2P08518 1224 aaKnown RBP2.32□□□□□ -2.04
UBP2YOR124C NAT1P12945 854 aaKnown RBP2.32□□□□□ -2.04
UBP2YOR124C OPI1P21957 404 aa2.32□□□□□ -2.04
UBP2YOR124C UBP1P25037 809 aa2.32□□□□□ -2.04
UBP2YOR124C RAD24P32641 659 aa2.32□□□□□ -2.04
UBP2YOR124C RAD5P32849 1169 aaPredicted RBP2.32□□□□□ -2.04
UBP2YOR124C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
UBP2YOR124C UBP14P38237 781 aaKnown RBP2.32□□□□□ -2.04
UBP2YOR124C AMN1P38285 549 aaPredicted RBP2.32□□□□□ -2.04
UBP2YOR124C SAP1P39955 897 aaKnown RBP2.32□□□□□ -2.04
UBP2YOR124C FYV10P40492 516 aa2.32□□□□□ -2.04
UBP2YOR124C TFG1P41895 735 aaPredicted RBP2.32□□□□□ -2.04
UBP2YOR124C ULI1P43604 169 aa2.32□□□□□ -2.04
UBP2YOR124C VPS53P47061 822 aa2.32□□□□□ -2.04
UBP2YOR124C ZDS1P50111 915 aaKnown RBP2.32□□□□□ -2.04
UBP2YOR124C ERG5P54781 538 aa2.32□□□□□ -2.04
UBP2YOR124C RPL22BP56628 122 aaKnown RBP2.32□□□□□ -2.04
UBP2YOR124C FAR8Q05040 523 aa2.32□□□□□ -2.04
UBP2YOR124C CIR2Q08822 631 aa2.32□□□□□ -2.04
UBP2YOR124C STF2P16965 84 aa2.31□□□□□ -2.04
UBP2YOR124C TPM1P17536 199 aaKnown RBP2.31□□□□□ -2.04
UBP2YOR124C YCR051WP25631 222 aa2.31□□□□□ -2.04
UBP2YOR124C BMH1P29311 267 aaKnown RBP2.31□□□□□ -2.04
UBP2YOR124C RME1P32338 300 aaKnown RBP2.31□□□□□ -2.04
UBP2YOR124C ASF1P32447 279 aa2.31□□□□□ -2.04
UBP2YOR124C CDC11P32458 415 aa2.31□□□□□ -2.04
UBP2YOR124C YER130CP39959 443 aa2.31□□□□□ -2.04
UBP2YOR124C ARB1P40024 610 aaKnown RBP2.31□□□□□ -2.04
UBP2YOR124C MIC19P43594 170 aa2.31□□□□□ -2.04
UBP2YOR124C PRP31P49704 494 aaPredicted RBP2.31□□□□□ -2.04
UBP2YOR124C VPS16Q03308 798 aa2.31□□□□□ -2.04
UBP2YOR124C VPS38Q05919 439 aa2.31□□□□□ -2.04
UBP2YOR124C OMS1Q06668 471 aa2.31□□□□□ -2.04
UBP2YOR124C TRS33Q99394 268 aa2.31□□□□□ -2.04
UBP2YOR124C PET122P10355 254 aa2.31□□□□□ -2.04
UBP2YOR124C CKI1P20485 582 aa2.31□□□□□ -2.04
UBP2YOR124C UGA3P26370 528 aa2.31□□□□□ -2.04
UBP2YOR124C FBP26P32604 452 aa2.31□□□□□ -2.04
UBP2YOR124C PTC3P34221 468 aaKnown RBP2.31□□□□□ -2.04
UBP2YOR124C PTC4P38089 393 aa2.31□□□□□ -2.04
UBP2YOR124C RRM3P38766 723 aa2.31□□□□□ -2.04
UBP2YOR124C ILM1P47155 203 aa2.31□□□□□ -2.04
UBP2YOR124C PKH3Q03306 898 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms