RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A AVO1Q08236 1176 aa3.44□□□□□ -1.86
YMR172C-AYMR172C-A HTS1P07263 546 aaKnown RBP3.43□□□□□ -1.86
YMR172C-AYMR172C-A NFS1P25374 497 aa3.43□□□□□ -1.86
YMR172C-AYMR172C-A TAF1P46677 1066 aa3.43□□□□□ -1.86
YMR172C-AYMR172C-A UTP22P53254 1237 aaPredicted RBP3.43□□□□□ -1.86
YMR172C-AYMR172C-A ELA1P53861 379 aaPredicted RBP3.43□□□□□ -1.86
YMR172C-AYMR172C-A UFD2P54860 961 aa3.43□□□□□ -1.86
YMR172C-AYMR172C-A RPL34AP87262 121 aaPredicted RBP3.43□□□□□ -1.86
YMR172C-AYMR172C-A PTC7P38797 343 aa3.42□□□□□ -1.86
YMR172C-AYMR172C-A CTR9P89105 1077 aa3.42□□□□□ -1.86
YMR172C-AYMR172C-A MEC3Q02574 474 aa3.42□□□□□ -1.86
YMR172C-AYMR172C-A EAR1Q03212 550 aa3.42□□□□□ -1.86
YMR172C-AYMR172C-A CDA2Q06703 312 aa3.42□□□□□ -1.86
YMR172C-AYMR172C-A QDR1P40475 563 aa3.41□□□□□ -1.86
YMR172C-AYMR172C-A GTS1P40956 396 aa3.41□□□□□ -1.86
YMR172C-AYMR172C-A ALT1P52893 592 aa3.41□□□□□ -1.86
YMR172C-AYMR172C-A YVC1Q12324 675 aa3.41□□□□□ -1.86
YMR172C-AYMR172C-A CMR1Q12510 522 aaKnown RBP3.41□□□□□ -1.86
YMR172C-AYMR172C-A SMY2P32909 740 aaKnown RBP3.4□□□□□ -1.87
YMR172C-AYMR172C-A FOL2P51601 243 aaKnown RBP3.4□□□□□ -1.87
YMR172C-AYMR172C-A BSC2Q05611 235 aa3.4□□□□□ -1.87
YMR172C-AYMR172C-A COBP00163 385 aa3.39□□□□□ -1.87
YMR172C-AYMR172C-A MCM5P29496 775 aaKnown RBP3.39□□□□□ -1.87
YMR172C-AYMR172C-A NNK1P36003 928 aa3.39□□□□□ -1.87
YMR172C-AYMR172C-A AIM3P38266 947 aaKnown RBP3.39□□□□□ -1.87
YMR172C-AYMR172C-A ATG14P38270 344 aa3.39□□□□□ -1.87
YMR172C-AYMR172C-A RIM11P38615 370 aa3.39□□□□□ -1.87
YMR172C-AYMR172C-A TSA1P34760 196 aaKnown RBP3.38□□□□□ -1.87
YMR172C-AYMR172C-A YKL077WP36081 392 aa3.38□□□□□ -1.87
YMR172C-AYMR172C-A ETP1P38748 585 aaKnown RBP3.38□□□□□ -1.87
YMR172C-AYMR172C-A YGR045CP53229 120 aa3.38□□□□□ -1.87
YMR172C-AYMR172C-A MRPL22P53881 309 aa3.38□□□□□ -1.87
YMR172C-AYMR172C-A TPP1Q03796 238 aa3.38□□□□□ -1.87
YMR172C-AYMR172C-A PRP6P19735 899 aaPredicted RBP3.37□□□□□ -1.87
YMR172C-AYMR172C-A THI80P35202 319 aa3.37□□□□□ -1.87
YMR172C-AYMR172C-A PEX7P39108 375 aa3.37□□□□□ -1.87
YMR172C-AYMR172C-A MON1P53129 644 aa3.37□□□□□ -1.87
YMR172C-AYMR172C-A YNL011CP53980 444 aa3.37□□□□□ -1.87
YMR172C-AYMR172C-A RSC4Q02206 625 aa3.37□□□□□ -1.87
YMR172C-AYMR172C-A HDA2Q06629 674 aa3.37□□□□□ -1.87
YMR172C-AYMR172C-A PMT7Q06644 662 aa3.37□□□□□ -1.87
YMR172C-AYMR172C-A LPX1Q12405 387 aaKnown RBP3.37□□□□□ -1.87
YMR172C-AYMR172C-A DUR3P33413 735 aa3.36□□□□□ -1.87
YMR172C-AYMR172C-A NMD3P38861 518 aaKnown RBP3.36□□□□□ -1.87
YMR172C-AYMR172C-A ORC3P54790 616 aa3.36□□□□□ -1.87
YMR172C-AYMR172C-A INP54Q08227 384 aaKnown RBP3.36□□□□□ -1.87
YMR172C-AYMR172C-A PUS7Q08647 676 aaKnown RBP3.36□□□□□ -1.87
YMR172C-AYMR172C-A YOR352WQ08816 343 aa3.36□□□□□ -1.87
YMR172C-AYMR172C-A TOD6P34219 525 aa3.35□□□□□ -1.87
YMR172C-AYMR172C-A FLR1P38124 548 aa3.35□□□□□ -1.87
YMR172C-AYMR172C-A SHU2P38957 223 aa3.35□□□□□ -1.87
YMR172C-AYMR172C-A YAF9P53930 226 aa3.35□□□□□ -1.87
YMR172C-AYMR172C-A TRS120Q04183 1289 aa3.35□□□□□ -1.87
YMR172C-AYMR172C-A SUB2Q07478 446 aaKnown RBP3.35□□□□□ -1.87
YMR172C-AYMR172C-A FLP1P03870 423 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A TY1A-LR4P0C2I8 440 aaKnown RBP3.34□□□□□ -1.87
YMR172C-AYMR172C-A TY1A-DR6P0CX70 440 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A TY1A-ER1P0CX71 440 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A TY1A-LR2P0CX72 440 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A TY1A-PLP0CX73 440 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A TY1A-JR1P0CX74 440 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A TY1A-LR3P0CX75 440 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A TY1A-ML2P0CX76 440 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A PRP5P21372 849 aaPredicted RBP3.34□□□□□ -1.87
YMR172C-AYMR172C-A ARL1P38116 183 aaKnown RBP3.34□□□□□ -1.87
YMR172C-AYMR172C-A YHL012WP38709 493 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A ATG1P53104 897 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A NUT1P53114 1132 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A RIM8P53179 542 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A CDC55Q00362 526 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A UBP3Q01477 912 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
YMR172C-AYMR172C-A TY1A-GR1Q12085 440 aa3.34□□□□□ -1.87
YMR172C-AYMR172C-A TY1A-PR3Q6Q5H1 440 aaKnown RBP3.34□□□□□ -1.87
YMR172C-AYMR172C-A TY1A-OLQ92392 440 aaKnown RBP3.34□□□□□ -1.87
YMR172C-AYMR172C-A AIM26P32858 118 aa3.33□□□□□ -1.88
YMR172C-AYMR172C-A HSE1P38753 452 aa3.33□□□□□ -1.88
YMR172C-AYMR172C-A YAR028WP39548 234 aa3.33□□□□□ -1.88
YMR172C-AYMR172C-A MTR4P47047 1073 aaKnown RBP3.33□□□□□ -1.88
YMR172C-AYMR172C-A YNR063WP53749 607 aa3.33□□□□□ -1.88
YMR172C-AYMR172C-A SNO2P53823 222 aa3.33□□□□□ -1.88
YMR172C-AYMR172C-A YLR257WQ06146 321 aaKnown RBP3.33□□□□□ -1.88
YMR172C-AYMR172C-A LAP2Q10740 671 aa3.33□□□□□ -1.88
YMR172C-AYMR172C-A YDL177CQ12257 170 aa3.33□□□□□ -1.88
YMR172C-AYMR172C-A RPS13P05756 151 aaKnown RBP3.32□□□□□ -1.88
YMR172C-AYMR172C-A GRS1P38088 690 aaKnown RBP3.32□□□□□ -1.88
YMR172C-AYMR172C-A RVS167P39743 482 aaKnown RBP3.32□□□□□ -1.88
YMR172C-AYMR172C-A SLS1P42900 643 aa3.32□□□□□ -1.88
YMR172C-AYMR172C-A RET1P22276 1149 aaKnown RBP3.31□□□□□ -1.88
YMR172C-AYMR172C-A SAP155P43612 1002 aa3.31□□□□□ -1.88
YMR172C-AYMR172C-A ACF4P47129 309 aa3.31□□□□□ -1.88
YMR172C-AYMR172C-A NOC3Q07896 663 aaPredicted RBP3.31□□□□□ -1.88
YMR172C-AYMR172C-A HRK1Q08732 759 aaKnown RBP3.31□□□□□ -1.88
YMR172C-AYMR172C-A SOD2P00447 233 aa3.3□□□□□ -1.88
YMR172C-AYMR172C-A MDL2P33311 773 aa3.3□□□□□ -1.88
YMR172C-AYMR172C-A PEX13P80667 386 aa3.3□□□□□ -1.88
YMR172C-AYMR172C-A NBA1Q08229 501 aaKnown RBP3.3□□□□□ -1.88
YMR172C-AYMR172C-A YPL277CQ08989 487 aa3.3□□□□□ -1.88
YMR172C-AYMR172C-A EXO5P38289 585 aa3.29□□□□□ -1.88
YMR172C-AYMR172C-A RSM26P47141 266 aa3.29□□□□□ -1.88
YMR172C-AYMR172C-A GSF2Q04697 403 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms