RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W HVG1P0CE11 249 aa6.74□□□□□ -1.33
VPS36YLR417W RAD4P14736 754 aa6.74□□□□□ -1.33
VPS36YLR417W SCW11P53189 542 aa6.74□□□□□ -1.33
VPS36YLR417W ALG12P53730 551 aa6.74□□□□□ -1.33
VPS36YLR417W HDA2Q06629 674 aa6.74□□□□□ -1.33
VPS36YLR417W CCP1P00431 361 aa6.73□□□□□ -1.33
VPS36YLR417W DIT1P21623 536 aa6.73□□□□□ -1.33
VPS36YLR417W MSC7P38694 644 aa6.73□□□□□ -1.33
VPS36YLR417W YJL181WP46987 611 aa6.73□□□□□ -1.33
VPS36YLR417W SIW14P53965 281 aa6.73□□□□□ -1.33
VPS36YLR417W TY1A-BLQ12266 440 aa6.73□□□□□ -1.33
VPS36YLR417W YKL069WP36088 180 aa6.73□□□□□ -1.33
VPS36YLR417W AMN1P38285 549 aaPredicted RBP6.73□□□□□ -1.33
VPS36YLR417W FPR3P38911 411 aaKnown RBP6.73□□□□□ -1.33
VPS36YLR417W BAS1P22035 811 aa6.72□□□□□ -1.33
VPS36YLR417W YKL077WP36081 392 aa6.72□□□□□ -1.33
VPS36YLR417W RDH54P38086 958 aa6.72□□□□□ -1.33
VPS36YLR417W BRE2P43132 505 aa6.72□□□□□ -1.33
VPS36YLR417W TIM54P47045 478 aa6.72□□□□□ -1.33
VPS36YLR417W YJR124CP47159 448 aa6.72□□□□□ -1.33
VPS36YLR417W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
VPS36YLR417W SOG2Q08817 791 aa6.72□□□□□ -1.33
VPS36YLR417W HEM13P11353 328 aaKnown RBP6.71□□□□□ -1.34
VPS36YLR417W VMA4P22203 233 aaKnown RBP6.71□□□□□ -1.34
VPS36YLR417W TFA2P36145 328 aa6.71□□□□□ -1.34
VPS36YLR417W EXO5P38289 585 aa6.71□□□□□ -1.34
VPS36YLR417W HXT13P39924 564 aa6.71□□□□□ -1.34
VPS36YLR417W TYW3P53177 273 aa6.71□□□□□ -1.34
VPS36YLR417W HXT17P53631 564 aa6.71□□□□□ -1.34
VPS36YLR417W FAR11P53917 953 aa6.71□□□□□ -1.34
VPS36YLR417W HXT15P54854 567 aa6.71□□□□□ -1.34
VPS36YLR417W YMR265CQ03508 461 aaKnown RBP6.71□□□□□ -1.34
VPS36YLR417W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
VPS36YLR417W FPS1P23900 669 aa6.7□□□□□ -1.34
VPS36YLR417W AGP1P25376 633 aa6.7□□□□□ -1.34
VPS36YLR417W YNR065CP53751 1116 aa6.7□□□□□ -1.34
VPS36YLR417W SPO20Q04359 397 aa6.7□□□□□ -1.34
VPS36YLR417W HTS1P07263 546 aaKnown RBP6.7□□□□□ -1.34
VPS36YLR417W LYP1P32487 611 aa6.7□□□□□ -1.34
VPS36YLR417W RER2P35196 286 aa6.7□□□□□ -1.34
VPS36YLR417W FET4P40988 552 aa6.7□□□□□ -1.34
VPS36YLR417W TRP2P00899 507 aaKnown RBP6.69□□□□□ -1.34
VPS36YLR417W CHZ1P40019 153 aaPredicted RBP6.69□□□□□ -1.34
VPS36YLR417W PRK1P40494 810 aa6.69□□□□□ -1.34
VPS36YLR417W GUP1P53154 560 aa6.69□□□□□ -1.34
VPS36YLR417W SHE9Q04172 456 aa6.69□□□□□ -1.34
VPS36YLR417W SPO75Q07798 868 aa6.69□□□□□ -1.34
VPS36YLR417W PPM2Q08282 695 aa6.69□□□□□ -1.34
VPS36YLR417W SBA1P28707 216 aaKnown RBP6.68□□□□□ -1.34
VPS36YLR417W LSB6P42951 607 aa6.68□□□□□ -1.34
VPS36YLR417W CUZ1P53899 274 aa6.68□□□□□ -1.34
VPS36YLR417W REC8Q12188 680 aa6.68□□□□□ -1.34
VPS36YLR417W YDR461C-AQ2V2P7 80 aa6.68□□□□□ -1.34
VPS36YLR417W YHR020WP38708 688 aaKnown RBP6.67□□□□□ -1.34
VPS36YLR417W NUP82P40368 713 aa6.67□□□□□ -1.34
VPS36YLR417W LEM3P42838 414 aa6.67□□□□□ -1.34
VPS36YLR417W TY1A-DR2Q03964 440 aaKnown RBP6.67□□□□□ -1.34
VPS36YLR417W TY1A-MR1Q04215 440 aa6.67□□□□□ -1.34
VPS36YLR417W MRP10O75012 95 aa6.67□□□□□ -1.34
VPS36YLR417W MRP8P35719 219 aa6.67□□□□□ -1.34
VPS36YLR417W YBR184WP38299 523 aa6.67□□□□□ -1.34
VPS36YLR417W ROG3P43602 733 aa6.67□□□□□ -1.34
VPS36YLR417W ROD1Q02805 837 aa6.67□□□□□ -1.34
VPS36YLR417W FLC1Q08967 793 aa6.67□□□□□ -1.34
VPS36YLR417W MET6P05694 767 aaKnown RBP6.66□□□□□ -1.34
VPS36YLR417W STE5P32917 917 aa6.66□□□□□ -1.34
VPS36YLR417W IRR1P40541 1150 aa6.66□□□□□ -1.34
VPS36YLR417W UTP22P53254 1237 aaPredicted RBP6.66□□□□□ -1.34
VPS36YLR417W EST2Q06163 884 aa6.66□□□□□ -1.34
VPS36YLR417W OSH2Q12451 1283 aa6.66□□□□□ -1.34
VPS36YLR417W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
VPS36YLR417W ARL1P38116 183 aaKnown RBP6.65□□□□□ -1.34
VPS36YLR417W ADE12P80210 433 aaKnown RBP6.65□□□□□ -1.34
VPS36YLR417W YIG1Q08956 461 aa6.65□□□□□ -1.34
VPS36YLR417W TY1A-LR4P0C2I8 440 aaKnown RBP6.64□□□□□ -1.35
VPS36YLR417W TY1A-DR6P0CX70 440 aa6.64□□□□□ -1.35
VPS36YLR417W TY1A-ER1P0CX71 440 aa6.64□□□□□ -1.35
VPS36YLR417W TY1A-LR2P0CX72 440 aa6.64□□□□□ -1.35
VPS36YLR417W TY1A-PLP0CX73 440 aa6.64□□□□□ -1.35
VPS36YLR417W TY1A-JR1P0CX74 440 aa6.64□□□□□ -1.35
VPS36YLR417W TY1A-LR3P0CX75 440 aa6.64□□□□□ -1.35
VPS36YLR417W TY1A-ML2P0CX76 440 aa6.64□□□□□ -1.35
VPS36YLR417W VBA5P36172 582 aa6.64□□□□□ -1.35
VPS36YLR417W SEA4P38164 1038 aa6.64□□□□□ -1.35
VPS36YLR417W GGA2P38817 585 aaKnown RBP6.64□□□□□ -1.35
VPS36YLR417W RSP5P39940 809 aaKnown RBP6.64□□□□□ -1.35
VPS36YLR417W MTR4P47047 1073 aaKnown RBP6.64□□□□□ -1.35
VPS36YLR417W YGR125WP53273 1036 aa6.64□□□□□ -1.35
VPS36YLR417W HAS1Q03532 505 aaKnown RBP6.64□□□□□ -1.35
VPS36YLR417W POB3Q04636 552 aaKnown RBP6.64□□□□□ -1.35
VPS36YLR417W TY1A-GR1Q12085 440 aa6.64□□□□□ -1.35
VPS36YLR417W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.64□□□□□ -1.35
VPS36YLR417W TY1A-OLQ92392 440 aaKnown RBP6.64□□□□□ -1.35
VPS36YLR417W RPL8BP29453 256 aaKnown RBP6.64□□□□□ -1.35
VPS36YLR417W MKK2P32491 506 aa6.64□□□□□ -1.35
VPS36YLR417W ABD1P32783 436 aaPredicted RBP6.64□□□□□ -1.35
VPS36YLR417W ADD66P36040 267 aa6.64□□□□□ -1.35
VPS36YLR417W NEO1P40527 1151 aa6.64□□□□□ -1.35
VPS36YLR417W LYS5P50113 272 aa6.64□□□□□ -1.35
VPS36YLR417W UTP5Q04177 643 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 168 ms