RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	TY1A-PL	P0CX73	440 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	TY1A-JR1	P0CX74	440 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	TY1A-LR3	P0CX75	440 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	TY1A-ML2	P0CX76	440 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	PET112	P33893	541 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	SHU2	P38957	223 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	POL5	P39985	1022 aa	Known RBP	4.87	□□□□□ -1.63
VPS33	YLR396C	PEX13	P80667	386 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	MAG2	Q06436	670 aa	Known RBP	4.87	□□□□□ -1.63
VPS33	YLR396C	TY1A-GR1	Q12085	440 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.87	□□□□□ -1.63
VPS33	YLR396C	TY4A-H	Q6Q5P6	413 aa		4.87	□□□□□ -1.63
VPS33	YLR396C	TY1A-OL	Q92392	440 aa	Known RBP	4.87	□□□□□ -1.63
VPS33	YLR396C	AI1	P03875	834 aa		4.86	□□□□□ -1.63
VPS33	YLR396C	HEM13	P11353	328 aa	Known RBP	4.86	□□□□□ -1.63
VPS33	YLR396C	SEC23	P15303	768 aa	Known RBP	4.86	□□□□□ -1.63
VPS33	YLR396C	MNR2	P35724	969 aa		4.86	□□□□□ -1.63
VPS33	YLR396C	SBE2	P42223	864 aa	Known RBP	4.86	□□□□□ -1.63
VPS33	YLR396C	YGL140C	P53120	1219 aa		4.86	□□□□□ -1.63
VPS33	YLR396C	VPS16	Q03308	798 aa		4.86	□□□□□ -1.63
VPS33	YLR396C	PIN2	Q12057	282 aa		4.86	□□□□□ -1.63
VPS33	YLR396C	RDH54	P38086	958 aa		4.85	□□□□□ -1.63
VPS33	YLR396C	UTP22	P53254	1237 aa	Predicted RBP	4.85	□□□□□ -1.63
VPS33	YLR396C	GCR1	P07261	785 aa		4.84	□□□□□ -1.63
VPS33	YLR396C	SAC7	P17121	654 aa		4.84	□□□□□ -1.63
VPS33	YLR396C	YKL077W	P36081	392 aa		4.84	□□□□□ -1.63
VPS33	YLR396C	BOI2	P39969	1040 aa		4.84	□□□□□ -1.63
VPS33	YLR396C	XKS1	P42826	600 aa		4.84	□□□□□ -1.63
VPS33	YLR396C	YFL066C	P43538	392 aa		4.84	□□□□□ -1.63
VPS33	YLR396C	GCV1	P48015	400 aa		4.84	□□□□□ -1.63
VPS33	YLR396C	GNP1	P48813	663 aa		4.84	□□□□□ -1.63
VPS33	YLR396C	CLN2	P20438	545 aa		4.84	□□□□□ -1.64
VPS33	YLR396C	VMA4	P22203	233 aa	Known RBP	4.84	□□□□□ -1.64
VPS33	YLR396C	YNR014W	P53719	212 aa		4.84	□□□□□ -1.64
VPS33	YLR396C	ELG1	Q12050	791 aa		4.84	□□□□□ -1.64
VPS33	YLR396C	TAF13	P11747	167 aa		4.83	□□□□□ -1.64
VPS33	YLR396C	CDC34	P14682	295 aa		4.83	□□□□□ -1.64
VPS33	YLR396C	DUT1	P33317	147 aa		4.83	□□□□□ -1.64
VPS33	YLR396C	NEM1	P38757	446 aa		4.83	□□□□□ -1.64
VPS33	YLR396C	MAD1	P40957	749 aa		4.83	□□□□□ -1.64
VPS33	YLR396C	DSE4	P53753	1117 aa		4.83	□□□□□ -1.64
VPS33	YLR396C	HDA2	Q06629	674 aa		4.83	□□□□□ -1.64
VPS33	YLR396C	ERS1	P17261	260 aa		4.82	□□□□□ -1.64
VPS33	YLR396C	ARL1	P38116	183 aa	Known RBP	4.82	□□□□□ -1.64
VPS33	YLR396C	RRM3	P38766	723 aa		4.82	□□□□□ -1.64
VPS33	YLR396C	MEC3	Q02574	474 aa		4.82	□□□□□ -1.64
VPS33	YLR396C	SLS1	P42900	643 aa		4.82	□□□□□ -1.64
VPS33	YLR396C	MRL1	Q06815	381 aa		4.82	□□□□□ -1.64
VPS33	YLR396C	THI72	Q08579	599 aa		4.82	□□□□□ -1.64
VPS33	YLR396C	RTT10	Q08924	1013 aa		4.82	□□□□□ -1.64
VPS33	YLR396C	MCX1	P38323	520 aa	Predicted RBP	4.81	□□□□□ -1.64
VPS33	YLR396C	FAR11	P53917	953 aa		4.81	□□□□□ -1.64
VPS33	YLR396C	UTP5	Q04177	643 aa	Known RBP	4.81	□□□□□ -1.64
VPS33	YLR396C	TDA6	Q06466	467 aa		4.81	□□□□□ -1.64
VPS33	YLR396C	REC8	Q12188	680 aa		4.81	□□□□□ -1.64
VPS33	YLR396C	MAE1	P36013	669 aa	Known RBP	4.81	□□□□□ -1.64
VPS33	YLR396C	HXT13	P39924	564 aa		4.81	□□□□□ -1.64
VPS33	YLR396C	HXT17	P53631	564 aa		4.81	□□□□□ -1.64
VPS33	YLR396C	SIW14	P53965	281 aa		4.81	□□□□□ -1.64
VPS33	YLR396C	ALD6	P54115	500 aa	Known RBP	4.81	□□□□□ -1.64
VPS33	YLR396C	HXT15	P54854	567 aa		4.81	□□□□□ -1.64
VPS33	YLR396C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
VPS33	YLR396C	MDJ1	P35191	511 aa		4.8	□□□□□ -1.64
VPS33	YLR396C	REI1	P38344	393 aa	Predicted RBP	4.8	□□□□□ -1.64
VPS33	YLR396C	VAC8	P39968	578 aa		4.8	□□□□□ -1.64
VPS33	YLR396C	MTR4	P47047	1073 aa	Known RBP	4.8	□□□□□ -1.64
VPS33	YLR396C	TY1A-NL1	Q12391	440 aa	Known RBP	4.8	□□□□□ -1.64
VPS33	YLR396C	BUD9	P53226	547 aa		4.79	□□□□□ -1.64
VPS33	YLR396C	YGR053C	P53234	283 aa		4.79	□□□□□ -1.64
VPS33	YLR396C	NSG2	P53898	299 aa		4.79	□□□□□ -1.64
VPS33	YLR396C	GAS5	Q08193	484 aa		4.79	□□□□□ -1.64
VPS33	YLR396C	YLL054C	Q12244	843 aa		4.79	□□□□□ -1.64
VPS33	YLR396C	ENT3	P47160	408 aa		4.79	□□□□□ -1.64
VPS33	YLR396C	FAA4	P47912	694 aa	Known RBP	4.79	□□□□□ -1.64
VPS33	YLR396C	KIP3	P53086	805 aa	Known RBP	4.79	□□□□□ -1.64
VPS33	YLR396C	YMR074C	Q04773	145 aa		4.79	□□□□□ -1.64
VPS33	YLR396C	SFA1	P32771	386 aa		4.78	□□□□□ -1.64
VPS33	YLR396C	GDE1	Q02979	1223 aa		4.78	□□□□□ -1.64
VPS33	YLR396C	EST2	Q06163	884 aa		4.78	□□□□□ -1.64
VPS33	YLR396C	TMA46	Q12000	345 aa	Known RBP	4.78	□□□□□ -1.64
VPS33	YLR396C	AI3	P03877	415 aa		4.77	□□□□□ -1.65
VPS33	YLR396C	ADD66	P36040	267 aa		4.77	□□□□□ -1.65
VPS33	YLR396C	NCE103	P53615	221 aa		4.77	□□□□□ -1.65
VPS33	YLR396C	ROD1	Q02805	837 aa		4.77	□□□□□ -1.65
VPS33	YLR396C	EEB1	Q02891	456 aa		4.77	□□□□□ -1.65
VPS33	YLR396C	ALG6	Q12001	544 aa	Known RBP	4.77	□□□□□ -1.65
VPS33	YLR396C	YOR223W	Q12015	292 aa		4.77	□□□□□ -1.65
VPS33	YLR396C	SPO74	P45819	413 aa		4.77	□□□□□ -1.65
VPS33	YLR396C	CWC24	P53769	259 aa		4.77	□□□□□ -1.65
VPS33	YLR396C	RKM2	Q03942	479 aa		4.77	□□□□□ -1.65
VPS33	YLR396C	RAD27	P26793	382 aa		4.76	□□□□□ -1.65
VPS33	YLR396C	MKK2	P32491	506 aa		4.76	□□□□□ -1.65
VPS33	YLR396C	YDR215C	Q12240	137 aa		4.76	□□□□□ -1.65
VPS33	YLR396C	DED1	P06634	604 aa	Known RBP	4.76	□□□□□ -1.65
VPS33	YLR396C	AFG2	P32794	780 aa		4.76	□□□□□ -1.65
VPS33	YLR396C	RER2	P35196	286 aa		4.76	□□□□□ -1.65
VPS33	YLR396C	YGR045C	P53229	120 aa		4.76	□□□□□ -1.65
VPS33	YLR396C	SSF2	Q12153	453 aa	Predicted RBP	4.76	□□□□□ -1.65
VPS33	YLR396C	YCK2	P23292	546 aa	Known RBP	4.75	□□□□□ -1.65
VPS33	YLR396C	YAR028W	P39548	234 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms