RNA–Protein interactions for RNA: YLR250W

SSP120, Transcript of Protein of unknown function, yeastyeast

Gene SSP120, Length 705 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSP120YLR250W POL32P47110 350 aa6.77□□□□□ -1.33
SSP120YLR250W SCS3P53012 380 aa6.77□□□□□ -1.33
SSP120YLR250W SAM1P10659 382 aaKnown RBP6.76□□□□□ -1.33
SSP120YLR250W MIP1P15801 1254 aa6.76□□□□□ -1.33
SSP120YLR250W PRO3P32263 286 aaKnown RBP6.76□□□□□ -1.33
SSP120YLR250W SRP40P32583 406 aaPredicted RBP6.76□□□□□ -1.33
SSP120YLR250W IOC3P43596 787 aa6.76□□□□□ -1.33
SSP120YLR250W LAM4P38800 1345 aa6.76□□□□□ -1.33
SSP120YLR250W RAD18P10862 487 aa6.75□□□□□ -1.33
SSP120YLR250W SHP1P34223 423 aa6.75□□□□□ -1.33
SSP120YLR250W KSP1P38691 1029 aaKnown RBP6.75□□□□□ -1.33
SSP120YLR250W GPB2P39717 880 aa6.75□□□□□ -1.33
SSP120YLR250W AIM21P40563 679 aa6.75□□□□□ -1.33
SSP120YLR250W YRB30P53107 440 aaPredicted RBP6.75□□□□□ -1.33
SSP120YLR250W YGL039WP53183 348 aaKnown RBP6.75□□□□□ -1.33
SSP120YLR250W MRPS35P53292 345 aa6.75□□□□□ -1.33
SSP120YLR250W PKH3Q03306 898 aaPredicted RBP6.75□□□□□ -1.33
SSP120YLR250W YDR034W-BQ6Q5X2 51 aa6.75□□□□□ -1.33
SSP120YLR250W RGT1P32862 1170 aa6.74□□□□□ -1.33
SSP120YLR250W WHI3P34761 661 aaKnown RBP6.74□□□□□ -1.33
SSP120YLR250W GEF1P37020 779 aa6.74□□□□□ -1.33
SSP120YLR250W RTS1P38903 757 aa6.74□□□□□ -1.33
SSP120YLR250W FPR3P38911 411 aaKnown RBP6.74□□□□□ -1.33
SSP120YLR250W BBC1P47068 1157 aa6.74□□□□□ -1.33
SSP120YLR250W ALD6P54115 500 aaKnown RBP6.74□□□□□ -1.33
SSP120YLR250W TMA64Q04600 565 aaKnown RBP6.74□□□□□ -1.33
SSP120YLR250W MRD1Q06106 887 aaKnown RBP6.74□□□□□ -1.33
SSP120YLR250W AHC1Q12433 566 aa6.74□□□□□ -1.33
SSP120YLR250W RAD61Q99359 647 aa6.74□□□□□ -1.33
SSP120YLR250W YUR1P26725 428 aa6.73□□□□□ -1.33
SSP120YLR250W NPL4P33755 580 aa6.73□□□□□ -1.33
SSP120YLR250W PHO88P38264 188 aaPredicted RBP6.73□□□□□ -1.33
SSP120YLR250W UBP9P39967 754 aa6.73□□□□□ -1.33
SSP120YLR250W SKP2P42843 763 aa6.73□□□□□ -1.33
SSP120YLR250W SLD5Q03406 294 aa6.73□□□□□ -1.33
SSP120YLR250W SUE1Q06524 206 aa6.73□□□□□ -1.33
SSP120YLR250W TUS1Q06412 1307 aa6.73□□□□□ -1.33
SSP120YLR250W YMR084WA2P2R3 262 aa6.72□□□□□ -1.33
SSP120YLR250W TGL1P34163 548 aa6.72□□□□□ -1.33
SSP120YLR250W CDC27P38042 758 aa6.72□□□□□ -1.33
SSP120YLR250W NOC2P39744 710 aaKnown RBP6.72□□□□□ -1.33
SSP120YLR250W SLN1P39928 1220 aaPredicted RBP6.72□□□□□ -1.33
SSP120YLR250W CTR1P49573 406 aa6.72□□□□□ -1.33
SSP120YLR250W YGR125WP53273 1036 aa6.72□□□□□ -1.33
SSP120YLR250W SOL4P53315 255 aa6.72□□□□□ -1.33
SSP120YLR250W EAR1Q03212 550 aa6.72□□□□□ -1.33
SSP120YLR250W DUS3Q06053 668 aaKnown RBP6.72□□□□□ -1.33
SSP120YLR250W TAH18Q12181 623 aa6.72□□□□□ -1.33
SSP120YLR250W PDC1P06169 563 aaKnown RBP6.71□□□□□ -1.34
SSP120YLR250W NDT80P38830 627 aa6.71□□□□□ -1.34
SSP120YLR250W VPS8P39702 1274 aa6.71□□□□□ -1.34
SSP120YLR250W YFL040WP43562 540 aa6.71□□□□□ -1.34
SSP120YLR250W HDA1P53973 706 aa6.71□□□□□ -1.34
SSP120YLR250W MSC6Q08818 692 aaKnown RBP6.71□□□□□ -1.34
SSP120YLR250W CDC19P00549 500 aaKnown RBP6.7□□□□□ -1.34
SSP120YLR250W PRS1P32895 427 aaKnown RBP6.7□□□□□ -1.34
SSP120YLR250W VPS29P38759 282 aa6.7□□□□□ -1.34
SSP120YLR250W TOM71P38825 639 aaKnown RBP6.7□□□□□ -1.34
SSP120YLR250W RRP8P38961 392 aaKnown RBP6.7□□□□□ -1.34
SSP120YLR250W PTK2P47116 818 aaKnown RBP6.7□□□□□ -1.34
SSP120YLR250W ENP2P48234 707 aaKnown RBP6.7□□□□□ -1.34
SSP120YLR250W RPS15Q01855 142 aaKnown RBP6.7□□□□□ -1.34
SSP120YLR250W FMP30Q02883 468 aa6.7□□□□□ -1.34
SSP120YLR250W YMR321CQ04898 105 aa6.7□□□□□ -1.34
SSP120YLR250W CSC1Q06538 782 aa6.7□□□□□ -1.34
SSP120YLR250W ERP3Q12403 225 aa6.7□□□□□ -1.34
SSP120YLR250W YDR524C-BQ3E6R4 66 aa6.7□□□□□ -1.34
SSP120YLR250W UBR2Q07963 1872 aa6.7□□□□□ -1.34
SSP120YLR250W RIT1P23796 513 aa6.69□□□□□ -1.34
SSP120YLR250W KTR1P27810 393 aaKnown RBP6.69□□□□□ -1.34
SSP120YLR250W YGL015CP33199 130 aa6.69□□□□□ -1.34
SSP120YLR250W RIM101P33400 625 aa6.69□□□□□ -1.34
SSP120YLR250W DBP7P36120 742 aaKnown RBP6.69□□□□□ -1.34
SSP120YLR250W YAF9P53930 226 aa6.69□□□□□ -1.34
SSP120YLR250W UFD2P54860 961 aa6.69□□□□□ -1.34
SSP120YLR250W RKM4Q12504 494 aa6.69□□□□□ -1.34
SSP120YLR250W YKR018CP36114 725 aa6.68□□□□□ -1.34
SSP120YLR250W RFC1P38630 861 aaKnown RBP6.68□□□□□ -1.34
SSP120YLR250W VPS30Q02948 557 aa6.68□□□□□ -1.34
SSP120YLR250W SPH1Q06160 661 aa6.68□□□□□ -1.34
SSP120YLR250W PHR1P05066 565 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
SSP120YLR250W POX1P13711 748 aa6.67□□□□□ -1.34
SSP120YLR250W CAD1P24813 409 aaKnown RBP6.67□□□□□ -1.34
SSP120YLR250W MYO3P36006 1272 aa6.67□□□□□ -1.34
SSP120YLR250W MCR1P36060 302 aaKnown RBP6.67□□□□□ -1.34
SSP120YLR250W MET1P36150 593 aa6.67□□□□□ -1.34
SSP120YLR250W FLR1P38124 548 aa6.67□□□□□ -1.34
SSP120YLR250W OSH3P38713 996 aaKnown RBP6.67□□□□□ -1.34
SSP120YLR250W STM1P39015 273 aaKnown RBP6.67□□□□□ -1.34
SSP120YLR250W FOL1P53848 824 aa6.67□□□□□ -1.34
SSP120YLR250W DAK1P54838 584 aaKnown RBP6.67□□□□□ -1.34
SSP120YLR250W UTP4Q06679 776 aaKnown RBP6.67□□□□□ -1.34
SSP120YLR250W BRE1Q07457 700 aaKnown RBP6.67□□□□□ -1.34
SSP120YLR250W HOP09932 586 aa6.66□□□□□ -1.34
SSP120YLR250W ANP1P32629 500 aa6.66□□□□□ -1.34
SSP120YLR250W GRS1P38088 690 aaKnown RBP6.66□□□□□ -1.34
SSP120YLR250W REG2P38232 338 aa6.66□□□□□ -1.34
SSP120YLR250W YNL115CP53925 644 aa6.66□□□□□ -1.34
SSP120YLR250W VPS72Q03388 795 aa6.66□□□□□ -1.34
SSP120YLR250W TRM11Q12463 433 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms