RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C LPX1Q12405 387 aaKnown RBP3.36□□□□□ -1.87
VPS55YJR044C CMR1Q12510 522 aaKnown RBP3.36□□□□□ -1.87
VPS55YJR044C PRP6P19735 899 aaPredicted RBP3.35□□□□□ -1.87
VPS55YJR044C NPR1P22211 790 aa3.35□□□□□ -1.87
VPS55YJR044C ALT1P52893 592 aa3.35□□□□□ -1.87
VPS55YJR044C YVC1Q12324 675 aa3.35□□□□□ -1.87
VPS55YJR044C HTS1P07263 546 aaKnown RBP3.34□□□□□ -1.87
VPS55YJR044C RIM11P38615 370 aa3.34□□□□□ -1.87
VPS55YJR044C PTC7P38797 343 aa3.34□□□□□ -1.87
VPS55YJR044C PEX7P39108 375 aa3.34□□□□□ -1.87
VPS55YJR044C YLL054CQ12244 843 aa3.34□□□□□ -1.87
VPS55YJR044C YDL177CQ12257 170 aa3.34□□□□□ -1.87
VPS55YJR044C FUR4P05316 633 aaKnown RBP3.33□□□□□ -1.88
VPS55YJR044C NFS1P25374 497 aa3.33□□□□□ -1.88
VPS55YJR044C GTS1P40956 396 aa3.33□□□□□ -1.88
VPS55YJR044C ELA1P53861 379 aaPredicted RBP3.33□□□□□ -1.88
VPS55YJR044C ORC3P54790 616 aa3.33□□□□□ -1.88
VPS55YJR044C REI1P38344 393 aaPredicted RBP3.32□□□□□ -1.88
VPS55YJR044C ETP1P38748 585 aaKnown RBP3.32□□□□□ -1.88
VPS55YJR044C MRPL22P53881 309 aa3.32□□□□□ -1.88
VPS55YJR044C MEC3Q02574 474 aa3.32□□□□□ -1.88
VPS55YJR044C HDA2Q06629 674 aa3.32□□□□□ -1.88
VPS55YJR044C SSA4P22202 642 aaKnown RBP3.31□□□□□ -1.88
VPS55YJR044C YGR045CP53229 120 aa3.31□□□□□ -1.88
VPS55YJR044C UTP22P53254 1237 aaPredicted RBP3.31□□□□□ -1.88
VPS55YJR044C TY1A-LR4P0C2I8 440 aaKnown RBP3.3□□□□□ -1.88
VPS55YJR044C TY1A-DR6P0CX70 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-ER1P0CX71 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-LR2P0CX72 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-PLP0CX73 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-JR1P0CX74 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-LR3P0CX75 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-ML2P0CX76 440 aa3.3□□□□□ -1.88
VPS55YJR044C TOD6P34219 525 aa3.3□□□□□ -1.88
VPS55YJR044C ECM2P38241 364 aaKnown RBP3.3□□□□□ -1.88
VPS55YJR044C NMD3P38861 518 aaKnown RBP3.3□□□□□ -1.88
VPS55YJR044C GIS1Q03833 894 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-GR1Q12085 440 aa3.3□□□□□ -1.88
VPS55YJR044C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.3□□□□□ -1.88
VPS55YJR044C TY1A-OLQ92392 440 aaKnown RBP3.3□□□□□ -1.88
VPS55YJR044C PRP5P21372 849 aaPredicted RBP3.29□□□□□ -1.88
VPS55YJR044C SMY2P32909 740 aaKnown RBP3.29□□□□□ -1.88
VPS55YJR044C GLO3P38682 493 aaKnown RBP3.28□□□□□ -1.88
VPS55YJR044C RIM8P53179 542 aa3.28□□□□□ -1.88
VPS55YJR044C AVO1Q08236 1176 aa3.28□□□□□ -1.88
VPS55YJR044C RSC4Q02206 625 aa3.27□□□□□ -1.89
VPS55YJR044C TPP1Q03796 238 aa3.27□□□□□ -1.89
VPS55YJR044C YPL277CQ08989 487 aa3.27□□□□□ -1.89
VPS55YJR044C NNK1P36003 928 aa3.26□□□□□ -1.89
VPS55YJR044C QDR1P40475 563 aa3.26□□□□□ -1.89
VPS55YJR044C PUS7Q08647 676 aaKnown RBP3.26□□□□□ -1.89
VPS55YJR044C SOD2P00447 233 aa3.25□□□□□ -1.89
VPS55YJR044C SLS1P42900 643 aa3.25□□□□□ -1.89
VPS55YJR044C FLP1P03870 423 aa3.24□□□□□ -1.89
VPS55YJR044C RPS13P05756 151 aaKnown RBP3.24□□□□□ -1.89
VPS55YJR044C MCM5P29496 775 aaKnown RBP3.24□□□□□ -1.89
VPS55YJR044C SAP155P43612 1002 aa3.24□□□□□ -1.89
VPS55YJR044C MON1P53129 644 aa3.24□□□□□ -1.89
VPS55YJR044C YAF9P53930 226 aa3.24□□□□□ -1.89
VPS55YJR044C UFD2P54860 961 aa3.24□□□□□ -1.89
VPS55YJR044C KAR5Q04746 504 aa3.24□□□□□ -1.89
VPS55YJR044C CTS1P29029 562 aa3.23□□□□□ -1.89
VPS55YJR044C ABZ1P37254 787 aaPredicted RBP3.23□□□□□ -1.89
VPS55YJR044C SHM2P37291 469 aaKnown RBP3.23□□□□□ -1.89
VPS55YJR044C NUT1P53114 1132 aa3.23□□□□□ -1.89
VPS55YJR044C BSC2Q05611 235 aa3.23□□□□□ -1.89
VPS55YJR044C SAM35P14693 329 aa3.22□□□□□ -1.89
VPS55YJR044C YHL012WP38709 493 aa3.22□□□□□ -1.89
VPS55YJR044C NEM1P38757 446 aa3.22□□□□□ -1.89
VPS55YJR044C YNL011CP53980 444 aa3.22□□□□□ -1.89
VPS55YJR044C CLU1Q03690 1277 aaKnown RBP3.22□□□□□ -1.89
VPS55YJR044C YLR257WQ06146 321 aaKnown RBP3.22□□□□□ -1.89
VPS55YJR044C PMT7Q06644 662 aa3.22□□□□□ -1.89
VPS55YJR044C INP54Q08227 384 aaKnown RBP3.22□□□□□ -1.89
VPS55YJR044C MNL2Q12205 849 aa3.22□□□□□ -1.89
VPS55YJR044C AIM26P32858 118 aa3.21□□□□□ -1.9
VPS55YJR044C EXO5P38289 585 aa3.21□□□□□ -1.9
VPS55YJR044C LEO1P38439 464 aa3.21□□□□□ -1.9
VPS55YJR044C SNO2P53823 222 aa3.21□□□□□ -1.9
VPS55YJR044C TUB2P02557 457 aaKnown RBP3.2□□□□□ -1.9
VPS55YJR044C RET1P22276 1149 aaKnown RBP3.2□□□□□ -1.9
VPS55YJR044C YKL077WP36081 392 aa3.2□□□□□ -1.9
VPS55YJR044C ARL1P38116 183 aaKnown RBP3.2□□□□□ -1.9
VPS55YJR044C YAR028WP39548 234 aa3.2□□□□□ -1.9
VPS55YJR044C FOL2P51601 243 aaKnown RBP3.2□□□□□ -1.9
VPS55YJR044C GSF2Q04697 403 aaKnown RBP3.2□□□□□ -1.9
VPS55YJR044C TRS120Q04183 1289 aa3.19□□□□□ -1.9
VPS55YJR044C TAD3Q9URQ3 322 aa3.19□□□□□ -1.9
VPS55YJR044C YLR358CO13565 187 aa3.18□□□□□ -1.9
VPS55YJR044C PRE10P21242 288 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
VPS55YJR044C YJL045WP47052 634 aa3.18□□□□□ -1.9
VPS55YJR044C SPT20P50875 604 aa3.18□□□□□ -1.9
VPS55YJR044C ATG1P53104 897 aa3.18□□□□□ -1.9
VPS55YJR044C YNR063WP53749 607 aa3.18□□□□□ -1.9
VPS55YJR044C CDC55Q00362 526 aa3.18□□□□□ -1.9
VPS55YJR044C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
VPS55YJR044C RSA3Q05942 220 aaKnown RBP3.18□□□□□ -1.9
VPS55YJR044C PNS1Q12412 539 aa3.18□□□□□ -1.9
VPS55YJR044C MDL2P33311 773 aa3.17□□□□□ -1.9
VPS55YJR044C YDR132CQ03900 495 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms