RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeast

Gene RPL39, Length 156 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL39	YJL189W	PRP5	P21372	849 aa	Predicted RBP	4.18	□□□□□ -1.74
RPL39	YJL189W	NIT1	P40447	199 aa		4.18	□□□□□ -1.74
RPL39	YJL189W	TAF1	P46677	1066 aa		4.18	□□□□□ -1.74
RPL39	YJL189W	UTP22	P53254	1237 aa	Predicted RBP	4.18	□□□□□ -1.74
RPL39	YJL189W	UFD2	P54860	961 aa		4.18	□□□□□ -1.74
RPL39	YJL189W	CDA2	Q06703	312 aa		4.18	□□□□□ -1.74
RPL39	YJL189W	YLL054C	Q12244	843 aa		4.18	□□□□□ -1.74
RPL39	YJL189W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.17	□□□□□ -1.74
RPL39	YJL189W	TY1A-DR6	P0CX70	440 aa		4.17	□□□□□ -1.74
RPL39	YJL189W	TY1A-ER1	P0CX71	440 aa		4.17	□□□□□ -1.74
RPL39	YJL189W	TY1A-LR2	P0CX72	440 aa		4.17	□□□□□ -1.74
RPL39	YJL189W	TY1A-PL	P0CX73	440 aa		4.17	□□□□□ -1.74
RPL39	YJL189W	TY1A-JR1	P0CX74	440 aa		4.17	□□□□□ -1.74
RPL39	YJL189W	TY1A-LR3	P0CX75	440 aa		4.17	□□□□□ -1.74
RPL39	YJL189W	TY1A-ML2	P0CX76	440 aa		4.17	□□□□□ -1.74
RPL39	YJL189W	YGR045C	P53229	120 aa		4.17	□□□□□ -1.74
RPL39	YJL189W	YNL011C	P53980	444 aa		4.17	□□□□□ -1.74
RPL39	YJL189W	TY1A-GR1	Q12085	440 aa		4.17	□□□□□ -1.74
RPL39	YJL189W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.17	□□□□□ -1.74
RPL39	YJL189W	TY1A-OL	Q92392	440 aa	Known RBP	4.17	□□□□□ -1.74
RPL39	YJL189W	FLP1	P03870	423 aa		4.16	□□□□□ -1.74
RPL39	YJL189W	ADP1	P25371	1049 aa		4.16	□□□□□ -1.74
RPL39	YJL189W	NFS1	P25374	497 aa		4.16	□□□□□ -1.74
RPL39	YJL189W	PRO1	P32264	428 aa		4.16	□□□□□ -1.74
RPL39	YJL189W	TSA1	P34760	196 aa	Known RBP	4.16	□□□□□ -1.74
RPL39	YJL189W	YKL222C	P35995	705 aa		4.16	□□□□□ -1.74
RPL39	YJL189W	NMD3	P38861	518 aa	Known RBP	4.16	□□□□□ -1.74
RPL39	YJL189W	ALT1	P52893	592 aa		4.16	□□□□□ -1.74
RPL39	YJL189W	MON1	P53129	644 aa		4.16	□□□□□ -1.74
RPL39	YJL189W	PRP43	P53131	767 aa	Known RBP	4.16	□□□□□ -1.74
RPL39	YJL189W	YOR059C	Q08448	450 aa	Known RBP	4.16	□□□□□ -1.74
RPL39	YJL189W	TRE1	Q08919	783 aa		4.16	□□□□□ -1.74
RPL39	YJL189W	YVC1	Q12324	675 aa		4.16	□□□□□ -1.74
RPL39	YJL189W	YCR015C	P25616	317 aa		4.15	□□□□□ -1.75
RPL39	YJL189W	MCM5	P29496	775 aa	Known RBP	4.15	□□□□□ -1.75
RPL39	YJL189W	PEX7	P39108	375 aa		4.15	□□□□□ -1.75
RPL39	YJL189W	NUT1	P53114	1132 aa		4.15	□□□□□ -1.75
RPL39	YJL189W	RPL34A	P87262	121 aa	Predicted RBP	4.15	□□□□□ -1.75
RPL39	YJL189W	MSH6	Q03834	1242 aa		4.15	□□□□□ -1.75
RPL39	YJL189W	TRS120	Q04183	1289 aa		4.15	□□□□□ -1.75
RPL39	YJL189W	BSC2	Q05611	235 aa		4.15	□□□□□ -1.75
RPL39	YJL189W	ESC8	Q08119	714 aa		4.15	□□□□□ -1.75
RPL39	YJL189W	INP54	Q08227	384 aa	Known RBP	4.15	□□□□□ -1.75
RPL39	YJL189W	PTC7	P38797	343 aa		4.14	□□□□□ -1.75
RPL39	YJL189W	SLS1	P42900	643 aa		4.14	□□□□□ -1.75
RPL39	YJL189W	ATG1	P53104	897 aa		4.14	□□□□□ -1.75
RPL39	YJL189W	YAF9	P53930	226 aa		4.14	□□□□□ -1.75
RPL39	YJL189W	LPX1	Q12405	387 aa	Known RBP	4.14	□□□□□ -1.75
RPL39	YJL189W	TRL1	P09880	827 aa	Known RBP	4.13	□□□□□ -1.75
RPL39	YJL189W	THI80	P35202	319 aa		4.13	□□□□□ -1.75
RPL39	YJL189W	GRS1	P38088	690 aa	Known RBP	4.13	□□□□□ -1.75
RPL39	YJL189W	SAP155	P43612	1002 aa		4.13	□□□□□ -1.75
RPL39	YJL189W	ACF4	P47129	309 aa		4.13	□□□□□ -1.75
RPL39	YJL189W	GPI13	Q07830	1017 aa		4.13	□□□□□ -1.75
RPL39	YJL189W	AVO1	Q08236	1176 aa		4.13	□□□□□ -1.75
RPL39	YJL189W	GTS1	P40956	396 aa		4.12	□□□□□ -1.75
RPL39	YJL189W	CDC55	Q00362	526 aa		4.12	□□□□□ -1.75
RPL39	YJL189W	FRT1	Q99332	602 aa		4.12	□□□□□ -1.75
RPL39	YJL189W	SMY2	P32909	740 aa	Known RBP	4.11	□□□□□ -1.75
RPL39	YJL189W	PMT7	Q06644	662 aa		4.11	□□□□□ -1.75
RPL39	YJL189W	YDL177C	Q12257	170 aa		4.11	□□□□□ -1.75
RPL39	YJL189W	AIM3	P38266	947 aa	Known RBP	4.1	□□□□□ -1.75
RPL39	YJL189W	ETP1	P38748	585 aa	Known RBP	4.1	□□□□□ -1.75
RPL39	YJL189W	ERP5	P38819	212 aa		4.1	□□□□□ -1.75
RPL39	YJL189W	GIP4	P39732	760 aa		4.1	□□□□□ -1.75
RPL39	YJL189W	MDJ2	P42834	146 aa		4.1	□□□□□ -1.75
RPL39	YJL189W	TPP1	Q03796	238 aa		4.1	□□□□□ -1.75
RPL39	YJL189W	RLF2	Q12495	606 aa		4.1	□□□□□ -1.75
RPL39	YJL189W	EXO5	P38289	585 aa		4.09	□□□□□ -1.75
RPL39	YJL189W	NEM1	P38757	446 aa		4.09	□□□□□ -1.75
RPL39	YJL189W	PUS7	Q08647	676 aa	Known RBP	4.09	□□□□□ -1.75
RPL39	YJL189W	NNK1	P36003	928 aa		4.08	□□□□□ -1.76
RPL39	YJL189W	YKL077W	P36081	392 aa		4.08	□□□□□ -1.76
RPL39	YJL189W	ORC3	P54790	616 aa		4.08	□□□□□ -1.76
RPL39	YJL189W	NUT2	Q06213	157 aa		4.08	□□□□□ -1.76
RPL39	YJL189W	UGA4	P32837	571 aa		4.07	□□□□□ -1.76
RPL39	YJL189W	FLR1	P38124	548 aa		4.07	□□□□□ -1.76
RPL39	YJL189W	RVS167	P39743	482 aa	Known RBP	4.07	□□□□□ -1.76
RPL39	YJL189W	MRPL22	P53881	309 aa		4.07	□□□□□ -1.76
RPL39	YJL189W	YBL113C	Q7M4S9	792 aa		4.07	□□□□□ -1.76
RPL39	YJL189W	PRP6	P19735	899 aa	Predicted RBP	4.06	□□□□□ -1.76
RPL39	YJL189W	RET1	P22276	1149 aa	Known RBP	4.06	□□□□□ -1.76
RPL39	YJL189W	YNR063W	P53749	607 aa		4.06	□□□□□ -1.76
RPL39	YJL189W	YLR257W	Q06146	321 aa	Known RBP	4.06	□□□□□ -1.76
RPL39	YJL189W	NOC3	Q07896	663 aa	Predicted RBP	4.06	□□□□□ -1.76
RPL39	YJL189W	YAR028W	P39548	234 aa		4.05	□□□□□ -1.76
RPL39	YJL189W	PEX13	P80667	386 aa		4.05	□□□□□ -1.76
RPL39	YJL189W	ARL1	P38116	183 aa	Known RBP	4.04	□□□□□ -1.76
RPL39	YJL189W	UTP5	Q04177	643 aa	Known RBP	4.04	□□□□□ -1.76
RPL39	YJL189W	HAT1	Q12341	374 aa		4.04	□□□□□ -1.76
RPL39	YJL189W	SAM35	P14693	329 aa		4.03	□□□□□ -1.76
RPL39	YJL189W	MSH3	P25336	1018 aa		4.03	□□□□□ -1.76
RPL39	YJL189W	TOD6	P34219	525 aa		4.03	□□□□□ -1.76
RPL39	YJL189W	XKS1	P42826	600 aa		4.03	□□□□□ -1.76
RPL39	YJL189W	YCS4	Q06156	1176 aa		4.03	□□□□□ -1.76
RPL39	YJL189W	YPL277C	Q08989	487 aa		4.03	□□□□□ -1.76
RPL39	YJL189W	CDC3	P32457	520 aa	Known RBP	4.02	□□□□□ -1.77
RPL39	YJL189W	AIM26	P32858	118 aa		4.02	□□□□□ -1.77
RPL39	YJL189W	YHL012W	P38709	493 aa		4.02	□□□□□ -1.77
RPL39	YJL189W	RSA3	Q05942	220 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 66.2 ms