RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C SAM37P50110 327 aa4.05□□□□□ -1.76
YIR040CYIR040C ARI1P53111 347 aaKnown RBP4.05□□□□□ -1.76
YIR040CYIR040C DSE4P53753 1117 aa4.05□□□□□ -1.76
YIR040CYIR040C ELG1Q12050 791 aa4.05□□□□□ -1.76
YIR040CYIR040C QCR6P00127 147 aa4.04□□□□□ -1.76
YIR040CYIR040C PGM1P33401 570 aaKnown RBP4.04□□□□□ -1.76
YIR040CYIR040C THI12P42883 340 aa4.04□□□□□ -1.76
YIR040CYIR040C THI5P43534 340 aa4.04□□□□□ -1.76
YIR040CYIR040C DAK2P43550 591 aa4.04□□□□□ -1.76
YIR040CYIR040C OSW7P43611 510 aa4.04□□□□□ -1.76
YIR040CYIR040C THI11P47183 340 aa4.04□□□□□ -1.76
YIR040CYIR040C RTS3P53289 263 aa4.04□□□□□ -1.76
YIR040CYIR040C YAF9P53930 226 aa4.04□□□□□ -1.76
YIR040CYIR040C THI13Q07748 340 aa4.04□□□□□ -1.76
YIR040CYIR040C RLP24Q07915 199 aaKnown RBP4.04□□□□□ -1.76
YIR040CYIR040C REC8Q12188 680 aa4.04□□□□□ -1.76
YIR040CYIR040C HTS1P07263 546 aaKnown RBP4.03□□□□□ -1.76
YIR040CYIR040C RSC6P25632 483 aa4.03□□□□□ -1.76
YIR040CYIR040C SEC20P28791 383 aa4.03□□□□□ -1.76
YIR040CYIR040C UGA4P32837 571 aa4.03□□□□□ -1.76
YIR040CYIR040C MAE1P36013 669 aaKnown RBP4.03□□□□□ -1.76
YIR040CYIR040C TCB2P48231 1178 aa4.03□□□□□ -1.76
YIR040CYIR040C NCE103P53615 221 aa4.03□□□□□ -1.76
YIR040CYIR040C YCS4Q06156 1176 aa4.03□□□□□ -1.76
YIR040CYIR040C TY1A-LR4P0C2I8 440 aaKnown RBP4.02□□□□□ -1.77
YIR040CYIR040C TY1A-DR6P0CX70 440 aa4.02□□□□□ -1.77
YIR040CYIR040C TY1A-ER1P0CX71 440 aa4.02□□□□□ -1.77
YIR040CYIR040C TY1A-LR2P0CX72 440 aa4.02□□□□□ -1.77
YIR040CYIR040C TY1A-PLP0CX73 440 aa4.02□□□□□ -1.77
YIR040CYIR040C TY1A-JR1P0CX74 440 aa4.02□□□□□ -1.77
YIR040CYIR040C TY1A-LR3P0CX75 440 aa4.02□□□□□ -1.77
YIR040CYIR040C TY1A-ML2P0CX76 440 aa4.02□□□□□ -1.77
YIR040CYIR040C MCM5P29496 775 aaKnown RBP4.02□□□□□ -1.77
YIR040CYIR040C NAM7P30771 971 aaKnown RBP4.02□□□□□ -1.77
YIR040CYIR040C VPS35P34110 944 aa4.02□□□□□ -1.77
YIR040CYIR040C CIC1P38779 376 aaKnown RBP4.02□□□□□ -1.77
YIR040CYIR040C MPP10P47083 593 aaKnown RBP4.02□□□□□ -1.77
YIR040CYIR040C KIP3P53086 805 aaKnown RBP4.02□□□□□ -1.77
YIR040CYIR040C PMT7Q06644 662 aa4.02□□□□□ -1.77
YIR040CYIR040C TY1A-GR1Q12085 440 aa4.02□□□□□ -1.77
YIR040CYIR040C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.02□□□□□ -1.77
YIR040CYIR040C TY1A-OLQ92392 440 aaKnown RBP4.02□□□□□ -1.77
YIR040CYIR040C HSC82P15108 705 aaKnown RBP4.01□□□□□ -1.77
YIR040CYIR040C SWE1P32944 819 aa4.01□□□□□ -1.77
YIR040CYIR040C PRP40P33203 583 aaKnown RBP4.01□□□□□ -1.77
YIR040CYIR040C BRN1P38170 754 aa4.01□□□□□ -1.77
YIR040CYIR040C DAL4Q04895 635 aa4.01□□□□□ -1.77
YIR040CYIR040C YIG1Q08956 461 aa4.01□□□□□ -1.77
YIR040CYIR040C RNA1P11745 407 aaKnown RBP4□□□□□ -1.77
YIR040CYIR040C GCD6P32501 712 aaKnown RBP4□□□□□ -1.77
YIR040CYIR040C SLD2P34252 453 aa4□□□□□ -1.77
YIR040CYIR040C AKR1P39010 764 aa4□□□□□ -1.77
YIR040CYIR040C RVS167P39743 482 aaKnown RBP4□□□□□ -1.77
YIR040CYIR040C RPT2P40327 437 aaKnown RBP4□□□□□ -1.77
YIR040CYIR040C ENV11P53246 860 aa4□□□□□ -1.77
YIR040CYIR040C UTP22P53254 1237 aaPredicted RBP4□□□□□ -1.77
YIR040CYIR040C TLG1Q03322 224 aa4□□□□□ -1.77
YIR040CYIR040C YMR074CQ04773 145 aa4□□□□□ -1.77
YIR040CYIR040C ATE1P16639 503 aa3.99□□□□□ -1.77
YIR040CYIR040C RPT1P33299 467 aaKnown RBP3.99□□□□□ -1.77
YIR040CYIR040C EXO5P38289 585 aa3.99□□□□□ -1.77
YIR040CYIR040C FAA3P39002 694 aa3.99□□□□□ -1.77
YIR040CYIR040C FUN12P39730 1002 aaKnown RBP3.99□□□□□ -1.77
YIR040CYIR040C GCV1P48015 400 aa3.99□□□□□ -1.77
YIR040CYIR040C FAR11P53917 953 aa3.99□□□□□ -1.77
YIR040CYIR040C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
YIR040CYIR040C YLR122CQ12312 125 aa3.99□□□□□ -1.77
YIR040CYIR040C COQ2P32378 372 aa3.98□□□□□ -1.77
YIR040CYIR040C SLS1P42900 643 aa3.98□□□□□ -1.77
YIR040CYIR040C MEC3Q02574 474 aa3.98□□□□□ -1.77
YIR040CYIR040C ULP1Q02724 621 aa3.98□□□□□ -1.77
YIR040CYIR040C RRP15Q06511 250 aaPredicted RBP3.98□□□□□ -1.77
YIR040CYIR040C ALG6Q12001 544 aaKnown RBP3.98□□□□□ -1.77
YIR040CYIR040C TRP3P00937 484 aa3.97□□□□□ -1.77
YIR040CYIR040C HXK1P04806 485 aaKnown RBP3.97□□□□□ -1.77
YIR040CYIR040C SBP1P10080 294 aaKnown RBP3.97□□□□□ -1.77
YIR040CYIR040C GPT2P36148 743 aa3.97□□□□□ -1.77
YIR040CYIR040C REI1P38344 393 aaPredicted RBP3.97□□□□□ -1.77
YIR040CYIR040C SAF1P38352 637 aa3.97□□□□□ -1.77
YIR040CYIR040C NEM1P38757 446 aa3.97□□□□□ -1.77
YIR040CYIR040C POL32P47110 350 aa3.97□□□□□ -1.77
YIR040CYIR040C ALO1P54783 526 aaKnown RBP3.97□□□□□ -1.77
YIR040CYIR040C NOG1Q02892 647 aaKnown RBP3.97□□□□□ -1.77
YIR040CYIR040C YPL109CQ02981 657 aa3.97□□□□□ -1.77
YIR040CYIR040C DOT1Q04089 582 aaKnown RBP3.97□□□□□ -1.77
YIR040CYIR040C YOR223WQ12015 292 aa3.97□□□□□ -1.77
YIR040CYIR040C HEM13P11353 328 aaKnown RBP3.96□□□□□ -1.78
YIR040CYIR040C MSH3P25336 1018 aa3.96□□□□□ -1.78
YIR040CYIR040C MCM2P29469 868 aa3.96□□□□□ -1.78
YIR040CYIR040C YGL081WP53156 320 aa3.96□□□□□ -1.78
YIR040CYIR040C OXR1Q08952 273 aa3.96□□□□□ -1.78
YIR040CYIR040C PET111P08468 800 aa3.95□□□□□ -1.78
YIR040CYIR040C KAR2P16474 682 aaKnown RBP3.95□□□□□ -1.78
YIR040CYIR040C HEM3P28789 327 aa3.95□□□□□ -1.78
YIR040CYIR040C CDC11P32458 415 aa3.95□□□□□ -1.78
YIR040CYIR040C YKL077WP36081 392 aa3.95□□□□□ -1.78
YIR040CYIR040C KAE1P36132 386 aa3.95□□□□□ -1.78
YIR040CYIR040C YKR073CP36153 106 aa3.95□□□□□ -1.78
YIR040CYIR040C PEX28P38848 579 aa3.95□□□□□ -1.78
YIR040CYIR040C PIC2P40035 300 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms