RNA–Protein interactions for RNA: YIL167W

SDL1, Transcript of Open reading frame unlikely to produce a functional protein in S288C, yeast

Gene SDL1, Length 633 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDL1	YIL167W	NOG1	Q02892	647 aa	Known RBP	4.94	□□□□□ -1.62
SDL1	YIL167W	REC8	Q12188	680 aa		4.94	□□□□□ -1.62
SDL1	YIL167W	PRP40	P33203	583 aa	Known RBP	4.93	□□□□□ -1.62
SDL1	YIL167W	MON1	P53129	644 aa		4.93	□□□□□ -1.62
SDL1	YIL167W	YOR223W	Q12015	292 aa		4.93	□□□□□ -1.62
SDL1	YIL167W	COQ2	P32378	372 aa		4.92	□□□□□ -1.62
SDL1	YIL167W	SAF1	P38352	637 aa		4.92	□□□□□ -1.62
SDL1	YIL167W	KIP3	P53086	805 aa	Known RBP	4.92	□□□□□ -1.62
SDL1	YIL167W	ASF1	P32447	279 aa		4.91	□□□□□ -1.62
SDL1	YIL167W	YKL077W	P36081	392 aa		4.91	□□□□□ -1.62
SDL1	YIL167W	YMR074C	Q04773	145 aa		4.91	□□□□□ -1.62
SDL1	YIL167W	DAL4	Q04895	635 aa		4.91	□□□□□ -1.62
SDL1	YIL167W	GLT1	Q12680	2145 aa	Known RBP	4.9	□□□□□ -1.62
SDL1	YIL167W	SBP1	P10080	294 aa	Known RBP	4.9	□□□□□ -1.63
SDL1	YIL167W	RPT1	P33299	467 aa	Known RBP	4.9	□□□□□ -1.63
SDL1	YIL167W	EXO5	P38289	585 aa		4.9	□□□□□ -1.63
SDL1	YIL167W	MGE1	P38523	228 aa		4.9	□□□□□ -1.63
SDL1	YIL167W	ULP1	Q02724	621 aa		4.9	□□□□□ -1.63
SDL1	YIL167W	HXK1	P04806	485 aa	Known RBP	4.89	□□□□□ -1.63
SDL1	YIL167W	KAE1	P36132	386 aa		4.89	□□□□□ -1.63
SDL1	YIL167W	REI1	P38344	393 aa	Predicted RBP	4.89	□□□□□ -1.63
SDL1	YIL167W	POL32	P47110	350 aa		4.89	□□□□□ -1.63
SDL1	YIL167W	YPL109C	Q02981	657 aa		4.89	□□□□□ -1.63
SDL1	YIL167W	ADI1	Q03677	179 aa		4.89	□□□□□ -1.63
SDL1	YIL167W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
SDL1	YIL167W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.88	□□□□□ -1.63
SDL1	YIL167W	TY1A-DR6	P0CX70	440 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	TY1A-ER1	P0CX71	440 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	TY1A-LR2	P0CX72	440 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	TY1A-PL	P0CX73	440 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	TY1A-JR1	P0CX74	440 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	TY1A-LR3	P0CX75	440 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	TY1A-ML2	P0CX76	440 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	CHS2	P14180	963 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	YJR107W	P47145	328 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	YGR122W	P53272	402 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	DOT1	Q04089	582 aa	Known RBP	4.88	□□□□□ -1.63
SDL1	YIL167W	RRP15	Q06511	250 aa	Predicted RBP	4.88	□□□□□ -1.63
SDL1	YIL167W	GIC2	Q06648	383 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	TY1A-GR1	Q12085	440 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	YLR122C	Q12312	125 aa		4.88	□□□□□ -1.63
SDL1	YIL167W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.88	□□□□□ -1.63
SDL1	YIL167W	TY1A-OL	Q92392	440 aa	Known RBP	4.88	□□□□□ -1.63
SDL1	YIL167W	MSB1	P21339	1137 aa	Known RBP	4.87	□□□□□ -1.63
SDL1	YIL167W	VMA4	P22203	233 aa	Known RBP	4.87	□□□□□ -1.63
SDL1	YIL167W	MSH3	P25336	1018 aa		4.87	□□□□□ -1.63
SDL1	YIL167W	SQT1	P35184	431 aa		4.87	□□□□□ -1.63
SDL1	YIL167W	AKR1	P39010	764 aa		4.87	□□□□□ -1.63
SDL1	YIL167W	MTR4	P47047	1073 aa	Known RBP	4.87	□□□□□ -1.63
SDL1	YIL167W	TOS4	Q06266	489 aa		4.87	□□□□□ -1.63
SDL1	YIL167W	TAF13	P11747	167 aa		4.86	□□□□□ -1.63
SDL1	YIL167W	NAM7	P30771	971 aa	Known RBP	4.86	□□□□□ -1.63
SDL1	YIL167W	UGA4	P32837	571 aa		4.86	□□□□□ -1.63
SDL1	YIL167W	GPT2	P36148	743 aa		4.86	□□□□□ -1.63
SDL1	YIL167W	FAA3	P39002	694 aa		4.86	□□□□□ -1.63
SDL1	YIL167W	RSM26	P47141	266 aa		4.86	□□□□□ -1.63
SDL1	YIL167W	MCD1	Q12158	566 aa		4.86	□□□□□ -1.63
SDL1	YIL167W	ATE1	P16639	503 aa		4.85	□□□□□ -1.63
SDL1	YIL167W	NEM1	P38757	446 aa		4.85	□□□□□ -1.63
SDL1	YIL167W	PEX28	P38848	579 aa		4.85	□□□□□ -1.63
SDL1	YIL167W	SPO74	P45819	413 aa		4.85	□□□□□ -1.63
SDL1	YIL167W	AVO1	Q08236	1176 aa		4.85	□□□□□ -1.63
SDL1	YIL167W	MED7	Q08278	222 aa		4.85	□□□□□ -1.63
SDL1	YIL167W	YOR059C	Q08448	450 aa	Known RBP	4.85	□□□□□ -1.63
SDL1	YIL167W	SEC23	P15303	768 aa	Known RBP	4.84	□□□□□ -1.63
SDL1	YIL167W	NNK1	P36003	928 aa		4.84	□□□□□ -1.63
SDL1	YIL167W	RDH54	P38086	958 aa		4.84	□□□□□ -1.63
SDL1	YIL167W	MMM1	P41800	426 aa		4.84	□□□□□ -1.63
SDL1	YIL167W	MRPS18	P42847	217 aa		4.84	□□□□□ -1.63
SDL1	YIL167W	SLS1	P42900	643 aa		4.84	□□□□□ -1.63
SDL1	YIL167W	YGL140C	P53120	1219 aa		4.84	□□□□□ -1.63
SDL1	YIL167W	YGR045C	P53229	120 aa		4.84	□□□□□ -1.63
SDL1	YIL167W	PEX13	P80667	386 aa		4.84	□□□□□ -1.63
SDL1	YIL167W	RKM2	Q03942	479 aa		4.84	□□□□□ -1.63
SDL1	YIL167W	UTP5	Q04177	643 aa	Known RBP	4.84	□□□□□ -1.63
SDL1	YIL167W	ALG6	Q12001	544 aa	Known RBP	4.84	□□□□□ -1.63
SDL1	YIL167W	RAD2	P07276	1031 aa		4.83	□□□□□ -1.64
SDL1	YIL167W	CYC8	P14922	966 aa		4.83	□□□□□ -1.64
SDL1	YIL167W	PRE9	P23638	258 aa	Known RBP	4.83	□□□□□ -1.64
SDL1	YIL167W	SMY2	P32909	740 aa	Known RBP	4.83	□□□□□ -1.64
SDL1	YIL167W	MSH4	P40965	878 aa	Predicted RBP	4.83	□□□□□ -1.64
SDL1	YIL167W	ALT1	P52893	592 aa		4.83	□□□□□ -1.64
SDL1	YIL167W	RMD1	Q03441	430 aa		4.83	□□□□□ -1.64
SDL1	YIL167W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
SDL1	YIL167W	YAR028W	P39548	234 aa		4.82	□□□□□ -1.64
SDL1	YIL167W	PIC2	P40035	300 aa		4.82	□□□□□ -1.64
SDL1	YIL167W	CIT3	P43635	486 aa		4.82	□□□□□ -1.64
SDL1	YIL167W	ENT3	P47160	408 aa		4.82	□□□□□ -1.64
SDL1	YIL167W	INP52	P50942	1183 aa		4.82	□□□□□ -1.64
SDL1	YIL167W	YGR130C	P53278	816 aa		4.82	□□□□□ -1.64
SDL1	YIL167W	LAP2	Q10740	671 aa		4.82	□□□□□ -1.64
SDL1	YIL167W	TRP3	P00937	484 aa		4.81	□□□□□ -1.64
SDL1	YIL167W	RPS4A	P0CX35	261 aa	Known RBP	4.81	□□□□□ -1.64
SDL1	YIL167W	RPS4B	P0CX36	261 aa	Known RBP	4.81	□□□□□ -1.64
SDL1	YIL167W	YKR073C	P36153	106 aa		4.81	□□□□□ -1.64
SDL1	YIL167W	HSE1	P38753	452 aa		4.81	□□□□□ -1.64
SDL1	YIL167W	RPS26A	P39938	119 aa	Known RBP	4.81	□□□□□ -1.64
SDL1	YIL167W	RPS26B	P39939	119 aa	Known RBP	4.81	□□□□□ -1.64
SDL1	YIL167W	ELA1	P53861	379 aa	Predicted RBP	4.81	□□□□□ -1.64
SDL1	YIL167W	ALO1	P54783	526 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms