RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	APE4	P38821	490 aa		4.02	□□□□□ -1.77
TMA108	YIL137C	PIP2	P52960	996 aa		4.02	□□□□□ -1.77
TMA108	YIL137C	APP1	P53933	587 aa		4.02	□□□□□ -1.77
TMA108	YIL137C	YPL191C	Q08930	360 aa		4.02	□□□□□ -1.77
TMA108	YIL137C	SRF1	Q12516	437 aa		4.02	□□□□□ -1.77
TMA108	YIL137C	FUR4	P05316	633 aa	Known RBP	4.02	□□□□□ -1.77
TMA108	YIL137C	BFA1	P47113	574 aa		4.02	□□□□□ -1.77
TMA108	YIL137C	SPC105	P53148	917 aa		4.02	□□□□□ -1.77
TMA108	YIL137C	GRC3	Q07845	632 aa		4.02	□□□□□ -1.77
TMA108	YIL137C	OPI10	Q08202	246 aa		4.02	□□□□□ -1.77
TMA108	YIL137C	TMA7	Q3E764	64 aa	Known RBP	4.02	□□□□□ -1.77
TMA108	YIL137C	GAL1	P04385	528 aa		4.01	□□□□□ -1.77
TMA108	YIL137C	NDE1	P40215	560 aa		4.01	□□□□□ -1.77
TMA108	YIL137C	YGR016W	P53209	190 aa		4.01	□□□□□ -1.77
TMA108	YIL137C	RSC1	P53236	928 aa		4.01	□□□□□ -1.77
TMA108	YIL137C	CIA1	Q05583	330 aa		4.01	□□□□□ -1.77
TMA108	YIL137C	FRA1	Q07825	749 aa		4.01	□□□□□ -1.77
TMA108	YIL137C	YOR131C	Q12486	218 aa		4.01	□□□□□ -1.77
TMA108	YIL137C	SST2	P11972	698 aa	Known RBP	4.01	□□□□□ -1.77
TMA108	YIL137C	PLC1	P32383	869 aa		4.01	□□□□□ -1.77
TMA108	YIL137C	CAB3	P36076	571 aa		4.01	□□□□□ -1.77
TMA108	YIL137C	PEA2	P40091	420 aa		4.01	□□□□□ -1.77
TMA108	YIL137C	SYH1	Q02875	849 aa	Known RBP	4.01	□□□□□ -1.77
TMA108	YIL137C	TRP5	P00931	707 aa	Known RBP	4	□□□□□ -1.77
TMA108	YIL137C	HSP82	P02829	709 aa	Known RBP	4	□□□□□ -1.77
TMA108	YIL137C	EUG1	P32474	517 aa		4	□□□□□ -1.77
TMA108	YIL137C	PET112	P33893	541 aa		4	□□□□□ -1.77
TMA108	YIL137C	UBP9	P39967	754 aa		4	□□□□□ -1.77
TMA108	YIL137C	TIM11	P81449	96 aa	Predicted RBP	4	□□□□□ -1.77
TMA108	YIL137C	UTP13	Q05946	817 aa	Known RBP	4	□□□□□ -1.77
TMA108	YIL137C	SRB8	P25648	1427 aa		4	□□□□□ -1.77
TMA108	YIL137C	NAT1	P12945	854 aa	Known RBP	4	□□□□□ -1.77
TMA108	YIL137C	UBP1	P25037	809 aa		4	□□□□□ -1.77
TMA108	YIL137C	BET3	P36149	193 aa		4	□□□□□ -1.77
TMA108	YIL137C	RRF1	P38771	230 aa		4	□□□□□ -1.77
TMA108	YIL137C	GNP1	P48813	663 aa		4	□□□□□ -1.77
TMA108	YIL137C	GPI8	P49018	411 aa		4	□□□□□ -1.77
TMA108	YIL137C	RTA1	P53047	317 aa		4	□□□□□ -1.77
TMA108	YIL137C	MPD2	Q99316	277 aa		4	□□□□□ -1.77
TMA108	YIL137C	THI4	P32318	326 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	APL2	P36000	726 aa	Predicted RBP	3.99	□□□□□ -1.77
TMA108	YIL137C	RSC8	P43609	557 aa	Known RBP	3.99	□□□□□ -1.77
TMA108	YIL137C	MTR4	P47047	1073 aa	Known RBP	3.99	□□□□□ -1.77
TMA108	YIL137C	YGR237C	P50089	785 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	EEB1	Q02891	456 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	YML131W	Q03102	365 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	PRP3	Q03338	469 aa	Predicted RBP	3.99	□□□□□ -1.77
TMA108	YIL137C	TAF8	Q03750	510 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	PUN1	Q06991	263 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	TSC13	Q99190	310 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	BNR1	P40450	1375 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	NUP188	P52593	1655 aa	Known RBP	3.99	□□□□□ -1.77
TMA108	YIL137C	KRR1	P25586	316 aa	Predicted RBP	3.99	□□□□□ -1.77
TMA108	YIL137C	VPS35	P34110	944 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	SLI15	P38283	698 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	AMN1	P38285	549 aa	Predicted RBP	3.99	□□□□□ -1.77
TMA108	YIL137C	YAP1801	P38856	637 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	NIT1	P40447	199 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
TMA108	YIL137C	SRB7	P47822	140 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	TUB4	P53378	473 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	MET14	Q02196	202 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	YPR109W	Q06104	294 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	GAS4	Q08271	471 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	CCP1	P00431	361 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	RPL8B	P29453	256 aa	Known RBP	3.99	□□□□□ -1.77
TMA108	YIL137C	TRZ1	P36159	838 aa	Predicted RBP	3.99	□□□□□ -1.77
TMA108	YIL137C	KIC1	P38692	1080 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	YDR056C	Q12025	205 aa		3.99	□□□□□ -1.77
TMA108	YIL137C	TRM1	P15565	570 aa	Known RBP	3.98	□□□□□ -1.77
TMA108	YIL137C	RPB10	P22139	70 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	HSP78	P33416	811 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	HAL5	P38970	855 aa	Known RBP	3.98	□□□□□ -1.77
TMA108	YIL137C	SEC26	P41810	973 aa	Known RBP	3.98	□□□□□ -1.77
TMA108	YIL137C	NAN1	Q02931	896 aa	Known RBP	3.98	□□□□□ -1.77
TMA108	YIL137C	SXM1	Q04175	944 aa	Known RBP	3.98	□□□□□ -1.77
TMA108	YIL137C	CAB1	Q04430	367 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	REH1	Q06709	432 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	SSP2	Q08646	371 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	PRI2	P20457	528 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	YBR197C	P38306	217 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	YHR218W	P38899	603 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	DJP1	P40564	432 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	TIM54	P47045	478 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	UPF3	P48412	387 aa	Known RBP	3.98	□□□□□ -1.77
TMA108	YIL137C	YGR250C	P53316	781 aa	Known RBP	3.98	□□□□□ -1.77
TMA108	YIL137C	CDC55	Q00362	526 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	VMS1	Q04311	632 aa	Known RBP	3.98	□□□□□ -1.77
TMA108	YIL137C	BRE4	Q07660	1125 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	MED1	Q12321	566 aa		3.98	□□□□□ -1.77
TMA108	YIL137C	CYB2	P00175	591 aa		3.97	□□□□□ -1.77
TMA108	YIL137C	CYT1	P07143	309 aa		3.97	□□□□□ -1.77
TMA108	YIL137C	MEF1	P25039	761 aa		3.97	□□□□□ -1.77
TMA108	YIL137C	BRF1	P29056	596 aa		3.97	□□□□□ -1.77
TMA108	YIL137C	YHL041W	P38730	149 aa		3.97	□□□□□ -1.77
TMA108	YIL137C	GPP2	P40106	250 aa	Known RBP	3.97	□□□□□ -1.77
TMA108	YIL137C	DAS1	P47005	663 aa		3.97	□□□□□ -1.77
TMA108	YIL137C	SCY1	P53009	804 aa		3.97	□□□□□ -1.77
TMA108	YIL137C	FOX2	Q02207	900 aa	Known RBP	3.97	□□□□□ -1.77
TMA108	YIL137C	RRP6	Q12149	733 aa	Known RBP	3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms