RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeastyeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCI8YIL071C NPR1P22211 790 aa6.21□□□□□ -1.42
PCI8YIL071C FLR1P38124 548 aa6.21□□□□□ -1.42
PCI8YIL071C REI1P38344 393 aaPredicted RBP6.21□□□□□ -1.42
PCI8YIL071C CTR9P89105 1077 aa6.21□□□□□ -1.42
PCI8YIL071C ALG6Q12001 544 aaKnown RBP6.21□□□□□ -1.42
PCI8YIL071C YVC1Q12324 675 aa6.21□□□□□ -1.42
PCI8YIL071C UTP22P53254 1237 aaPredicted RBP6.2□□□□□ -1.42
PCI8YIL071C EAR1Q03212 550 aa6.2□□□□□ -1.42
PCI8YIL071C NOB1Q08444 459 aaKnown RBP6.2□□□□□ -1.42
PCI8YIL071C NFS1P25374 497 aa6.19□□□□□ -1.42
PCI8YIL071C AIM3P38266 947 aaKnown RBP6.19□□□□□ -1.42
PCI8YIL071C PEX7P39108 375 aa6.19□□□□□ -1.42
PCI8YIL071C GIS1Q03833 894 aa6.19□□□□□ -1.42
PCI8YIL071C LPX1Q12405 387 aaKnown RBP6.19□□□□□ -1.42
PCI8YIL071C CMR1Q12510 522 aaKnown RBP6.19□□□□□ -1.42
PCI8YIL071C RIM11P38615 370 aa6.18□□□□□ -1.42
PCI8YIL071C DMA2P53924 522 aa6.18□□□□□ -1.42
PCI8YIL071C SMY2P32909 740 aaKnown RBP6.17□□□□□ -1.42
PCI8YIL071C PTC7P38797 343 aa6.17□□□□□ -1.42
PCI8YIL071C MRPL22P53881 309 aa6.17□□□□□ -1.42
PCI8YIL071C COBP00163 385 aa6.16□□□□□ -1.42
PCI8YIL071C LEO1P38439 464 aa6.16□□□□□ -1.42
PCI8YIL071C BOL3P39724 118 aa6.16□□□□□ -1.42
PCI8YIL071C RIM8P53179 542 aa6.16□□□□□ -1.42
PCI8YIL071C PRP5P21372 849 aaPredicted RBP6.15□□□□□ -1.43
PCI8YIL071C NNK1P36003 928 aa6.15□□□□□ -1.43
PCI8YIL071C ELA1P53861 379 aaPredicted RBP6.15□□□□□ -1.43
PCI8YIL071C UFD2P54860 961 aa6.15□□□□□ -1.43
PCI8YIL071C AVO1Q08236 1176 aa6.15□□□□□ -1.43
PCI8YIL071C GTS1P40956 396 aa6.13□□□□□ -1.43
PCI8YIL071C RSC4Q02206 625 aa6.13□□□□□ -1.43
PCI8YIL071C YGR045CP53229 120 aa6.12□□□□□ -1.43
PCI8YIL071C GSF2Q04697 403 aaKnown RBP6.11□□□□□ -1.43
PCI8YIL071C YDL177CQ12257 170 aa6.11□□□□□ -1.43
PCI8YIL071C ARL1P38116 183 aaKnown RBP6.1□□□□□ -1.43
PCI8YIL071C SOD2P00447 233 aa6.09□□□□□ -1.43
PCI8YIL071C DUR3P33413 735 aa6.09□□□□□ -1.43
PCI8YIL071C TOD6P34219 525 aa6.09□□□□□ -1.43
PCI8YIL071C ETP1P38748 585 aaKnown RBP6.09□□□□□ -1.43
PCI8YIL071C FOL2P51601 243 aaKnown RBP6.09□□□□□ -1.43
PCI8YIL071C GLO3P38682 493 aaKnown RBP6.08□□□□□ -1.44
PCI8YIL071C PMT7Q06644 662 aa6.08□□□□□ -1.44
PCI8YIL071C PUS7Q08647 676 aaKnown RBP6.08□□□□□ -1.44
PCI8YIL071C TPP1Q03796 238 aa6.07□□□□□ -1.44
PCI8YIL071C SNO2P53823 222 aa6.06□□□□□ -1.44
PCI8YIL071C RPS13P05756 151 aaKnown RBP6.05□□□□□ -1.44
PCI8YIL071C SAP155P43612 1002 aa6.05□□□□□ -1.44
PCI8YIL071C BSC2Q05611 235 aa6.05□□□□□ -1.44
PCI8YIL071C TY1A-LR4P0C2I8 440 aaKnown RBP6.04□□□□□ -1.44
PCI8YIL071C TY1A-DR6P0CX70 440 aa6.04□□□□□ -1.44
PCI8YIL071C TY1A-ER1P0CX71 440 aa6.04□□□□□ -1.44
PCI8YIL071C TY1A-LR2P0CX72 440 aa6.04□□□□□ -1.44
PCI8YIL071C TY1A-PLP0CX73 440 aa6.04□□□□□ -1.44
PCI8YIL071C TY1A-JR1P0CX74 440 aa6.04□□□□□ -1.44
PCI8YIL071C TY1A-LR3P0CX75 440 aa6.04□□□□□ -1.44
PCI8YIL071C TY1A-ML2P0CX76 440 aa6.04□□□□□ -1.44
PCI8YIL071C QDR1P40475 563 aa6.04□□□□□ -1.44
PCI8YIL071C YAF9P53930 226 aa6.04□□□□□ -1.44
PCI8YIL071C YPL277CQ08989 487 aa6.04□□□□□ -1.44
PCI8YIL071C TY1A-GR1Q12085 440 aa6.04□□□□□ -1.44
PCI8YIL071C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.04□□□□□ -1.44
PCI8YIL071C TY1A-OLQ92392 440 aaKnown RBP6.04□□□□□ -1.44
PCI8YIL071C MCM5P29496 775 aaKnown RBP6.03□□□□□ -1.44
PCI8YIL071C YKL077WP36081 392 aa6.03□□□□□ -1.44
PCI8YIL071C YHL012WP38709 493 aa6.03□□□□□ -1.44
PCI8YIL071C YNL011CP53980 444 aa6.03□□□□□ -1.44
PCI8YIL071C KAR5Q04746 504 aa6.03□□□□□ -1.44
PCI8YIL071C FLP1P03870 423 aa6.02□□□□□ -1.45
PCI8YIL071C ABZ1P37254 787 aaPredicted RBP6.02□□□□□ -1.45
PCI8YIL071C NUT1P53114 1132 aa6.02□□□□□ -1.45
PCI8YIL071C YLR358CO13565 187 aa6.01□□□□□ -1.45
PCI8YIL071C CLU1Q03690 1277 aaKnown RBP6.01□□□□□ -1.45
PCI8YIL071C SHU2P38957 223 aa6□□□□□ -1.45
PCI8YIL071C TUB2P02557 457 aaKnown RBP5.99□□□□□ -1.45
PCI8YIL071C MDL2P33311 773 aa5.99□□□□□ -1.45
PCI8YIL071C YAR028WP39548 234 aa5.99□□□□□ -1.45
PCI8YIL071C CDC55Q00362 526 aa5.99□□□□□ -1.45
PCI8YIL071C RVS167P39743 482 aaKnown RBP5.99□□□□□ -1.45
PCI8YIL071C TRS120Q04183 1289 aa5.99□□□□□ -1.45
PCI8YIL071C YLR257WQ06146 321 aaKnown RBP5.99□□□□□ -1.45
PCI8YIL071C SAM35P14693 329 aa5.98□□□□□ -1.45
PCI8YIL071C SHM2P37291 469 aaKnown RBP5.98□□□□□ -1.45
PCI8YIL071C HSE1P38753 452 aa5.98□□□□□ -1.45
PCI8YIL071C HRK1Q08732 759 aaKnown RBP5.98□□□□□ -1.45
PCI8YIL071C YOR352WQ08816 343 aa5.98□□□□□ -1.45
PCI8YIL071C RET1P22276 1149 aaKnown RBP5.97□□□□□ -1.45
PCI8YIL071C AIM26P32858 118 aa5.97□□□□□ -1.45
PCI8YIL071C SLS1P42900 643 aa5.97□□□□□ -1.45
PCI8YIL071C MTR4P47047 1073 aaKnown RBP5.97□□□□□ -1.45
PCI8YIL071C ATG1P53104 897 aa5.97□□□□□ -1.45
PCI8YIL071C INP54Q08227 384 aaKnown RBP5.97□□□□□ -1.45
PCI8YIL071C PNS1Q12412 539 aa5.97□□□□□ -1.45
PCI8YIL071C CTS1P29029 562 aa5.96□□□□□ -1.46
PCI8YIL071C ATG14P38270 344 aa5.96□□□□□ -1.46
PCI8YIL071C EXO5P38289 585 aa5.96□□□□□ -1.46
PCI8YIL071C NMD3P38861 518 aaKnown RBP5.96□□□□□ -1.46
PCI8YIL071C ACF4P47129 309 aa5.96□□□□□ -1.46
PCI8YIL071C LAP2Q10740 671 aa5.96□□□□□ -1.46
PCI8YIL071C TAD3Q9URQ3 322 aa5.96□□□□□ -1.46
PCI8YIL071C PRE10P21242 288 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
Retrieved 100 of 5,963 RNA–protein pairs in 85.6 ms