RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C IOC3P43596 787 aa4.04□□□□□ -1.76
SSM4YIL030C ENV11P53246 860 aa4.04□□□□□ -1.76
SSM4YIL030C FAP1P53971 965 aa4.04□□□□□ -1.76
SSM4YIL030C VPS38Q05919 439 aa4.04□□□□□ -1.76
SSM4YIL030C TRS33Q99394 268 aa4.04□□□□□ -1.76
SSM4YIL030C RAD57P25301 460 aa4.04□□□□□ -1.76
SSM4YIL030C YKR075CP36155 307 aa4.04□□□□□ -1.76
SSM4YIL030C CCT4P39078 528 aaKnown RBP4.04□□□□□ -1.76
SSM4YIL030C ALD3P54114 506 aa4.04□□□□□ -1.76
SSM4YIL030C RPT6Q01939 405 aaKnown RBP4.04□□□□□ -1.76
SSM4YIL030C VFA1P40080 203 aa4.04□□□□□ -1.76
SSM4YIL030C YCG1Q06680 1035 aa4.04□□□□□ -1.76
SSM4YIL030C SSF2Q12153 453 aaPredicted RBP4.04□□□□□ -1.76
SSM4YIL030C SEC39Q12745 709 aa4.04□□□□□ -1.76
SSM4YIL030C CDC6P09119 513 aa4.03□□□□□ -1.76
SSM4YIL030C PRP16P15938 1071 aaPredicted RBP4.03□□□□□ -1.76
SSM4YIL030C ADE2P21264 571 aaKnown RBP4.03□□□□□ -1.76
SSM4YIL030C PRP5P21372 849 aaPredicted RBP4.03□□□□□ -1.76
SSM4YIL030C CAP1P28495 268 aaKnown RBP4.03□□□□□ -1.76
SSM4YIL030C FRD1P32614 470 aaKnown RBP4.03□□□□□ -1.76
SSM4YIL030C SIP5P40210 489 aaKnown RBP4.03□□□□□ -1.76
SSM4YIL030C PSR1Q07800 427 aa4.03□□□□□ -1.76
SSM4YIL030C DID4P36108 232 aa4.03□□□□□ -1.76
SSM4YIL030C GRX7P38068 203 aa4.03□□□□□ -1.76
SSM4YIL030C YBR032WP38223 100 aa4.03□□□□□ -1.76
SSM4YIL030C GPD2P41911 440 aaKnown RBP4.03□□□□□ -1.76
SSM4YIL030C DPL1Q05567 589 aa4.03□□□□□ -1.76
SSM4YIL030C SPN1Q06505 410 aaPredicted RBP4.03□□□□□ -1.76
SSM4YIL030C SFI1Q12369 946 aa4.03□□□□□ -1.76
SSM4YIL030C SNF3P10870 884 aa4.03□□□□□ -1.77
SSM4YIL030C NIP100P33420 868 aa4.03□□□□□ -1.77
SSM4YIL030C PTC4P38089 393 aa4.03□□□□□ -1.77
SSM4YIL030C RRM3P38766 723 aa4.03□□□□□ -1.77
SSM4YIL030C ROG3P43602 733 aa4.03□□□□□ -1.77
SSM4YIL030C ESC2Q06340 456 aa4.03□□□□□ -1.77
SSM4YIL030C GPN2Q08726 347 aaPredicted RBP4.03□□□□□ -1.77
SSM4YIL030C MSB4Q12317 492 aa4.03□□□□□ -1.77
SSM4YIL030C PDB1P32473 366 aaKnown RBP4.02□□□□□ -1.77
SSM4YIL030C NFU1P32860 256 aa4.02□□□□□ -1.77
SSM4YIL030C TBS1P38114 1094 aa4.02□□□□□ -1.77
SSM4YIL030C RET3P53600 189 aa4.02□□□□□ -1.77
SSM4YIL030C ZDS2P54786 942 aa4.02□□□□□ -1.77
SSM4YIL030C GET3Q12154 354 aaKnown RBP4.02□□□□□ -1.77
SSM4YIL030C EUG1P32474 517 aa4.02□□□□□ -1.77
SSM4YIL030C SRL3P36167 246 aa4.02□□□□□ -1.77
SSM4YIL030C PCH2P38126 564 aa4.02□□□□□ -1.77
SSM4YIL030C RIO1Q12196 484 aaKnown RBP4.02□□□□□ -1.77
SSM4YIL030C PPR1P07272 904 aaPredicted RBP4.02□□□□□ -1.77
SSM4YIL030C SWI4P25302 1093 aaKnown RBP4.02□□□□□ -1.77
SSM4YIL030C YHL050CP38721 697 aa4.02□□□□□ -1.77
SSM4YIL030C PAP2P53632 584 aaKnown RBP4.02□□□□□ -1.77
SSM4YIL030C YNL058CP53947 316 aa4.02□□□□□ -1.77
SSM4YIL030C IME1P21190 360 aa4.01□□□□□ -1.77
SSM4YIL030C DIT2P21595 489 aa4.01□□□□□ -1.77
SSM4YIL030C MNR2P35724 969 aa4.01□□□□□ -1.77
SSM4YIL030C MRX1P40050 688 aa4.01□□□□□ -1.77
SSM4YIL030C GET4Q12125 312 aa4.01□□□□□ -1.77
SSM4YIL030C ISY1P21374 235 aaPredicted RBP4.01□□□□□ -1.77
SSM4YIL030C SAP190P36123 1033 aa4.01□□□□□ -1.77
SSM4YIL030C ERG7P38604 731 aa4.01□□□□□ -1.77
SSM4YIL030C MIC19P43594 170 aa4.01□□□□□ -1.77
SSM4YIL030C TAD1P53065 400 aa4.01□□□□□ -1.77
SSM4YIL030C PEX14P53112 341 aa4.01□□□□□ -1.77
SSM4YIL030C SUB1P54000 292 aaKnown RBP4.01□□□□□ -1.77
SSM4YIL030C ARD1P07347 238 aaPredicted RBP4.01□□□□□ -1.77
SSM4YIL030C CKA2P19454 339 aa4.01□□□□□ -1.77
SSM4YIL030C KIP2P28743 706 aa4.01□□□□□ -1.77
SSM4YIL030C BCH2P36122 765 aa4.01□□□□□ -1.77
SSM4YIL030C ADE17P38009 592 aaKnown RBP4.01□□□□□ -1.77
SSM4YIL030C MIP6P38760 659 aaKnown RBP4.01□□□□□ -1.77
SSM4YIL030C XKS1P42826 600 aa4.01□□□□□ -1.77
SSM4YIL030C SYH1Q02875 849 aaKnown RBP4.01□□□□□ -1.77
SSM4YIL030C VAC14Q06708 880 aa4.01□□□□□ -1.77
SSM4YIL030C MEU1Q07938 337 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
SSM4YIL030C PLP2Q12017 286 aa4.01□□□□□ -1.77
SSM4YIL030C AI2P03876 854 aa4□□□□□ -1.77
SSM4YIL030C ADE3P07245 946 aaKnown RBP4□□□□□ -1.77
SSM4YIL030C SWC3P31376 625 aa4□□□□□ -1.77
SSM4YIL030C SET5P38890 526 aaKnown RBP4□□□□□ -1.77
SSM4YIL030C SHQ1P40486 507 aaPredicted RBP4□□□□□ -1.77
SSM4YIL030C YKE2P52553 114 aa4□□□□□ -1.77
SSM4YIL030C VPS16Q03308 798 aa4□□□□□ -1.77
SSM4YIL030C TOS4Q06266 489 aa4□□□□□ -1.77
SSM4YIL030C MAK16P10962 306 aaPredicted RBP4□□□□□ -1.77
SSM4YIL030C MSH4P40965 878 aaPredicted RBP4□□□□□ -1.77
SSM4YIL030C PRP31P49704 494 aaPredicted RBP4□□□□□ -1.77
SSM4YIL030C FMN1Q03778 218 aa4□□□□□ -1.77
SSM4YIL030C SKG3Q06315 1026 aa4□□□□□ -1.77
SSM4YIL030C CUR1Q06469 252 aa4□□□□□ -1.77
SSM4YIL030C RPB2P08518 1224 aaKnown RBP4□□□□□ -1.77
SSM4YIL030C PET123P17558 318 aa4□□□□□ -1.77
SSM4YIL030C RNR3P21672 869 aaKnown RBP4□□□□□ -1.77
SSM4YIL030C SAD1P43589 448 aa4□□□□□ -1.77
SSM4YIL030C NAF1P53919 492 aaKnown RBP4□□□□□ -1.77
SSM4YIL030C MEC3Q02574 474 aa4□□□□□ -1.77
SSM4YIL030C EEB1Q02891 456 aa4□□□□□ -1.77
SSM4YIL030C PKH1Q03407 766 aa4□□□□□ -1.77
SSM4YIL030C STE20Q03497 939 aaKnown RBP4□□□□□ -1.77
SSM4YIL030C VTI1Q04338 217 aa4□□□□□ -1.77
SSM4YIL030C TUM1Q08686 304 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 79 ms