RNA–Protein interactions for RNA: YHR100C

GEP4, Transcript of Mitochondrial phosphatidylglycerophosphatase (PGP phosphatase), yeast

Gene GEP4, Length 558 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEP4	YHR100C	EFM2	P38347	419 aa		4.07	□□□□□ -1.76
GEP4	YHR100C	GUA1	P38625	525 aa	Known RBP	4.07	□□□□□ -1.76
GEP4	YHR100C	GLO3	P38682	493 aa	Known RBP	4.07	□□□□□ -1.76
GEP4	YHR100C	PET100	P38958	111 aa		4.07	□□□□□ -1.76
GEP4	YHR100C	ARB1	P40024	610 aa	Known RBP	4.07	□□□□□ -1.76
GEP4	YHR100C	PXA1	P41909	870 aa		4.07	□□□□□ -1.76
GEP4	YHR100C	YJR115W	P47152	169 aa		4.07	□□□□□ -1.76
GEP4	YHR100C	ENP2	P48234	707 aa	Known RBP	4.07	□□□□□ -1.76
GEP4	YHR100C	ITC1	P53125	1264 aa		4.07	□□□□□ -1.76
GEP4	YHR100C	HOP2	P53187	214 aa		4.07	□□□□□ -1.76
GEP4	YHR100C	REX2	P54964	269 aa	Known RBP	4.07	□□□□□ -1.76
GEP4	YHR100C	SNZ1	Q03148	297 aa		4.07	□□□□□ -1.76
GEP4	YHR100C	YML119W	Q03208	357 aa		4.07	□□□□□ -1.76
GEP4	YHR100C	ATG38	Q05789	226 aa	Known RBP	4.07	□□□□□ -1.76
GEP4	YHR100C	DBP9	Q06218	594 aa	Known RBP	4.07	□□□□□ -1.76
GEP4	YHR100C	YLR352W	Q06479	807 aa		4.07	□□□□□ -1.76
GEP4	YHR100C	ARV1	Q06541	321 aa		4.07	□□□□□ -1.76
GEP4	YHR100C	UTP4	Q06679	776 aa	Known RBP	4.07	□□□□□ -1.76
GEP4	YHR100C	SLK19	Q08581	821 aa	Known RBP	4.07	□□□□□ -1.76
GEP4	YHR100C	BMS1	Q08965	1183 aa	Known RBP	4.07	□□□□□ -1.76
GEP4	YHR100C	RTP1	Q12751	981 aa		4.07	□□□□□ -1.76
GEP4	YHR100C	YGR161W-C	Q3E744	92 aa		4.07	□□□□□ -1.76
GEP4	YHR100C	HOM3	P10869	527 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	SEC23	P15303	768 aa	Known RBP	4.06	□□□□□ -1.76
GEP4	YHR100C	PET123	P17558	318 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	AAD3	P25612	363 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	BUD14	P27637	709 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	KTR1	P27810	393 aa	Known RBP	4.06	□□□□□ -1.76
GEP4	YHR100C	TPD3	P31383	635 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	VPH1	P32563	840 aa	Known RBP	4.06	□□□□□ -1.76
GEP4	YHR100C	MRE11	P32829	692 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	PEP12	P32854	288 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	YKL100C	P34248	587 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	RRN3	P36070	627 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	RKM3	P38222	552 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	TIF5	P38431	405 aa	Known RBP	4.06	□□□□□ -1.76
GEP4	YHR100C	CAJ1	P39101	391 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	RAD26	P40352	1085 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	ACF4	P47129	309 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	SRB7	P47822	140 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	SHE10	P53075	577 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	EFM5	P53200	248 aa	Known RBP	4.06	□□□□□ -1.76
GEP4	YHR100C	PXR1	P53335	271 aa	Predicted RBP	4.06	□□□□□ -1.76
GEP4	YHR100C	EAF7	P53911	425 aa	Known RBP	4.06	□□□□□ -1.76
GEP4	YHR100C	YNL050C	P53952	270 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	HEH2	Q03281	663 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	YDR444W	Q04093	687 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	RNH1	Q04740	348 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	PMT7	Q06644	662 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	NOC3	Q07896	663 aa	Predicted RBP	4.06	□□□□□ -1.76
GEP4	YHR100C	SRF1	Q12516	437 aa		4.06	□□□□□ -1.76
GEP4	YHR100C	PMS1	P14242	873 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	FAR1	P21268	830 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
GEP4	YHR100C	SRP40	P32583	406 aa	Predicted RBP	4.05	□□□□□ -1.76
GEP4	YHR100C	DLD1	P32891	587 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	TIF3	P34167	436 aa	Known RBP	4.05	□□□□□ -1.76
GEP4	YHR100C	ABZ1	P37254	787 aa	Predicted RBP	4.05	□□□□□ -1.76
GEP4	YHR100C	YLF2	P38746	405 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	YAP1801	P38856	637 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	CHZ1	P40019	153 aa	Predicted RBP	4.05	□□□□□ -1.76
GEP4	YHR100C	YER034W	P40022	185 aa	Known RBP	4.05	□□□□□ -1.76
GEP4	YHR100C	RTT105	P40063	208 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	IOC3	P43596	787 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	YGR016W	P53209	190 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	TFB3	Q03290	321 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	ATG16	Q03818	150 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	SPC19	Q03954	165 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	RAD33	Q04231	177 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	YMR111C	Q04461	462 aa	Predicted RBP	4.05	□□□□□ -1.76
GEP4	YHR100C	SMD2	Q06217	110 aa	Known RBP	4.05	□□□□□ -1.76
GEP4	YHR100C	SPP382	Q06411	708 aa	Predicted RBP	4.05	□□□□□ -1.76
GEP4	YHR100C	VIP1	Q06685	1146 aa	Known RBP	4.05	□□□□□ -1.76
GEP4	YHR100C	YOR352W	Q08816	343 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	RRI2	Q12348	645 aa		4.05	□□□□□ -1.76
GEP4	YHR100C	TUF1	P02992	437 aa	Known RBP	4.04	□□□□□ -1.76
GEP4	YHR100C	RPB2	P08518	1224 aa	Known RBP	4.04	□□□□□ -1.76
GEP4	YHR100C	RED1	P14291	827 aa		4.04	□□□□□ -1.76
GEP4	YHR100C	TPM1	P17536	199 aa	Known RBP	4.04	□□□□□ -1.76
GEP4	YHR100C	SUI2	P20459	304 aa	Known RBP	4.04	□□□□□ -1.76
GEP4	YHR100C	MCM3	P24279	971 aa	Known RBP	4.04	□□□□□ -1.76
GEP4	YHR100C	CDC60	P26637	1090 aa	Known RBP	4.04	□□□□□ -1.76
GEP4	YHR100C	SPT5	P27692	1063 aa	Known RBP	4.04	□□□□□ -1.76
GEP4	YHR100C	PEX18	P38855	283 aa		4.04	□□□□□ -1.76
GEP4	YHR100C	VPS41	P38959	992 aa		4.04	□□□□□ -1.76
GEP4	YHR100C	BEM4	P39011	633 aa		4.04	□□□□□ -1.76
GEP4	YHR100C	FTR1	P40088	404 aa		4.04	□□□□□ -1.76
GEP4	YHR100C	LAM5	P43560	674 aa		4.04	□□□□□ -1.76
GEP4	YHR100C	RAD17	P48581	401 aa		4.04	□□□□□ -1.76
GEP4	YHR100C	ATP22	P50273	684 aa	Predicted RBP	4.04	□□□□□ -1.76
GEP4	YHR100C	PAP2	P53632	584 aa	Known RBP	4.04	□□□□□ -1.76
GEP4	YHR100C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
GEP4	YHR100C	UTP14	Q04500	899 aa	Known RBP	4.04	□□□□□ -1.76
GEP4	YHR100C	ERB1	Q04660	807 aa	Known RBP	4.04	□□□□□ -1.76
GEP4	YHR100C	YDR338C	Q05497	695 aa		4.04	□□□□□ -1.76
GEP4	YHR100C	ORM2	Q06144	216 aa		4.04	□□□□□ -1.76
GEP4	YHR100C	SWA2	Q06677	668 aa		4.04	□□□□□ -1.76
GEP4	YHR100C	YPL191C	Q08930	360 aa		4.04	□□□□□ -1.76
GEP4	YHR100C	SLX4	Q12098	748 aa		4.04	□□□□□ -1.76
GEP4	YHR100C	ENT1	Q12518	454 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms