RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W AOS1Q06624 347 aa7.05□□□□□ -1.28
VMA16YHR026W ALE1Q08548 619 aa7.05□□□□□ -1.28
VMA16YHR026W KAR2P16474 682 aaKnown RBP7.04□□□□□ -1.28
VMA16YHR026W KCC4P25389 1037 aa7.04□□□□□ -1.28
VMA16YHR026W MAL31P38156 614 aa7.04□□□□□ -1.28
VMA16YHR026W AIM9P40053 627 aaKnown RBP7.04□□□□□ -1.28
VMA16YHR026W ACS2P52910 683 aaKnown RBP7.04□□□□□ -1.28
VMA16YHR026W SSP2Q08646 371 aa7.04□□□□□ -1.28
VMA16YHR026W HPR1P17629 752 aaKnown RBP7.03□□□□□ -1.28
VMA16YHR026W PHO87P25360 923 aa7.03□□□□□ -1.28
VMA16YHR026W DLD1P32891 587 aa7.03□□□□□ -1.28
VMA16YHR026W UBX7P38349 436 aa7.03□□□□□ -1.28
VMA16YHR026W NOP2P40991 618 aaKnown RBP7.03□□□□□ -1.28
VMA16YHR026W AAD14P42884 376 aa7.03□□□□□ -1.28
VMA16YHR026W VPS4P52917 437 aa7.03□□□□□ -1.28
VMA16YHR026W SYF1Q04048 859 aaPredicted RBP7.03□□□□□ -1.28
VMA16YHR026W WTM2Q12206 467 aa7.03□□□□□ -1.28
VMA16YHR026W CSR2Q12734 1121 aa7.03□□□□□ -1.28
VMA16YHR026W TSC13Q99190 310 aa7.03□□□□□ -1.28
VMA16YHR026W SPT2P06843 333 aaPredicted RBP7.02□□□□□ -1.29
VMA16YHR026W ARG82P07250 355 aa7.02□□□□□ -1.29
VMA16YHR026W AKL1P38080 1108 aaKnown RBP7.02□□□□□ -1.29
VMA16YHR026W MOT2P34909 587 aaKnown RBP7.01□□□□□ -1.29
VMA16YHR026W NTH2P35172 780 aa7.01□□□□□ -1.29
VMA16YHR026W TBS1P38114 1094 aa7.01□□□□□ -1.29
VMA16YHR026W UTP7P40055 554 aaKnown RBP7.01□□□□□ -1.29
VMA16YHR026W SLX8P40072 274 aa7.01□□□□□ -1.29
VMA16YHR026W RRT6P53117 311 aaPredicted RBP7.01□□□□□ -1.29
VMA16YHR026W GCR2Q01722 534 aa7.01□□□□□ -1.29
VMA16YHR026W VPS13Q07878 3144 aa7□□□□□ -1.29
VMA16YHR026W APE3P37302 537 aaKnown RBP7□□□□□ -1.29
VMA16YHR026W PNT1P38969 423 aa7□□□□□ -1.29
VMA16YHR026W DLD3P39976 496 aaKnown RBP7□□□□□ -1.29
VMA16YHR026W CRF1Q04930 467 aa7□□□□□ -1.29
VMA16YHR026W SWI5P08153 709 aa6.99□□□□□ -1.29
VMA16YHR026W HAP4P14064 554 aa6.99□□□□□ -1.29
VMA16YHR026W STV1P37296 890 aa6.99□□□□□ -1.29
VMA16YHR026W YFL034WP43564 1073 aa6.99□□□□□ -1.29
VMA16YHR026W ROM1P53046 1155 aa6.99□□□□□ -1.29
VMA16YHR026W PAP2P53632 584 aaKnown RBP6.99□□□□□ -1.29
VMA16YHR026W HAT1Q12341 374 aa6.99□□□□□ -1.29
VMA16YHR026W RPS6AP0CX37 236 aaKnown RBP6.98□□□□□ -1.29
VMA16YHR026W RPS6BP0CX38 236 aaPredicted RBP6.98□□□□□ -1.29
VMA16YHR026W AFG2P32794 780 aa6.98□□□□□ -1.29
VMA16YHR026W PRS1P32895 427 aaKnown RBP6.98□□□□□ -1.29
VMA16YHR026W RPP2BP02400 110 aaKnown RBP6.97□□□□□ -1.29
VMA16YHR026W RRG1Q12167 365 aaPredicted RBP6.97□□□□□ -1.29
VMA16YHR026W SSK22P25390 1331 aaPredicted RBP6.97□□□□□ -1.29
VMA16YHR026W IOC4Q04213 475 aa6.96□□□□□ -1.3
VMA16YHR026W APL2P36000 726 aaPredicted RBP6.95□□□□□ -1.3
VMA16YHR026W NUP85P46673 744 aa6.95□□□□□ -1.3
VMA16YHR026W YVH1Q02256 364 aaKnown RBP6.95□□□□□ -1.3
VMA16YHR026W RBA50Q04418 439 aa6.95□□□□□ -1.3
VMA16YHR026W GAS5Q08193 484 aa6.95□□□□□ -1.3
VMA16YHR026W LYS2P07702 1392 aa6.95□□□□□ -1.3
VMA16YHR026W HKR1P41809 1802 aa6.94□□□□□ -1.3
VMA16YHR026W CYT1P07143 309 aa6.94□□□□□ -1.3
VMA16YHR026W RPL34AP87262 121 aaPredicted RBP6.94□□□□□ -1.3
VMA16YHR026W SEN54Q02825 467 aaPredicted RBP6.94□□□□□ -1.3
VMA16YHR026W CBP1P07252 654 aa6.93□□□□□ -1.3
VMA16YHR026W YJR098CP47139 656 aa6.93□□□□□ -1.3
VMA16YHR026W LSC2P53312 427 aa6.93□□□□□ -1.3
VMA16YHR026W ALA1P40825 983 aaKnown RBP6.92□□□□□ -1.3
VMA16YHR026W SUM1P46676 1062 aa6.92□□□□□ -1.3
VMA16YHR026W NSE3Q05541 303 aa6.92□□□□□ -1.3
VMA16YHR026W OPT2Q06593 877 aa6.92□□□□□ -1.3
VMA16YHR026W RPP0P05317 312 aaKnown RBP6.91□□□□□ -1.3
VMA16YHR026W FBP1P09201 348 aa6.91□□□□□ -1.3
VMA16YHR026W VAN1P23642 535 aa6.91□□□□□ -1.3
VMA16YHR026W KRE2P27809 442 aa6.91□□□□□ -1.3
VMA16YHR026W MET22P32179 357 aa6.91□□□□□ -1.3
VMA16YHR026W UBX2Q04228 584 aa6.91□□□□□ -1.3
VMA16YHR026W GEF1P37020 779 aa6.9□□□□□ -1.3
VMA16YHR026W SSN3P39073 555 aa6.9□□□□□ -1.3
VMA16YHR026W VPS64Q03944 604 aa6.9□□□□□ -1.3
VMA16YHR026W SGD1Q06132 899 aa6.9□□□□□ -1.3
VMA16YHR026W GSM1P42950 618 aa6.89□□□□□ -1.31
VMA16YHR026W GSC2P40989 1895 aa6.89□□□□□ -1.31
VMA16YHR026W PAH1P32567 862 aa6.88□□□□□ -1.31
VMA16YHR026W TPS3P38426 1054 aaKnown RBP6.88□□□□□ -1.31
VMA16YHR026W YDR444WQ04093 687 aa6.88□□□□□ -1.31
VMA16YHR026W YLR225CQ05948 407 aaKnown RBP6.88□□□□□ -1.31
VMA16YHR026W YLR346CQ06139 101 aa6.88□□□□□ -1.31
VMA16YHR026W YPQ2Q06328 317 aa6.88□□□□□ -1.31
VMA16YHR026W PUN1Q06991 263 aa6.88□□□□□ -1.31
VMA16YHR026W DPH6Q12429 685 aa6.88□□□□□ -1.31
VMA16YHR026W ICP55P40051 511 aa6.87□□□□□ -1.31
VMA16YHR026W FLO11P08640 1367 aa6.86□□□□□ -1.31
VMA16YHR026W GAR1P28007 205 aaKnown RBP6.86□□□□□ -1.31
VMA16YHR026W SUV3P32580 737 aa6.86□□□□□ -1.31
VMA16YHR026W VPS27P40343 622 aaKnown RBP6.86□□□□□ -1.31
VMA16YHR026W SPR3P41901 512 aa6.86□□□□□ -1.31
VMA16YHR026W ZDS2P54786 942 aa6.86□□□□□ -1.31
VMA16YHR026W PRP42Q03776 544 aaKnown RBP6.86□□□□□ -1.31
VMA16YHR026W CDC45Q08032 650 aa6.86□□□□□ -1.31
VMA16YHR026W TRS33Q99394 268 aa6.86□□□□□ -1.31
VMA16YHR026W NIT1P40447 199 aa6.85□□□□□ -1.31
VMA16YHR026W RPT4P53549 437 aaKnown RBP6.85□□□□□ -1.31
VMA16YHR026W YNL050CP53952 270 aa6.85□□□□□ -1.31
VMA16YHR026W UBP2Q01476 1272 aa6.85□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 102.9 ms