RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C MXR1P40029 184 aa15.6■□□□□ 0.09
SHU1YHL006C RIT1P23796 513 aa15.59■□□□□ 0.09
SHU1YHL006C LDH1P38139 375 aa15.59■□□□□ 0.09
SHU1YHL006C BRE5P53741 515 aaKnown RBP15.59■□□□□ 0.09
SHU1YHL006C ALD6P54115 500 aaKnown RBP15.59■□□□□ 0.09
SHU1YHL006C ECM16Q04217 1267 aaKnown RBP15.59■□□□□ 0.09
SHU1YHL006C ARP8Q12386 881 aaKnown RBP RIP-Chip data15.59■□□□□ 0.09not detected
SHU1YHL006C UTR4P32626 227 aa15.58■□□□□ 0.08
SHU1YHL006C ANP1P32629 500 aa15.58■□□□□ 0.08
SHU1YHL006C HDA1P53973 706 aa15.58■□□□□ 0.08
SHU1YHL006C MET7Q08645 548 aa15.58■□□□□ 0.08
SHU1YHL006C YOR131CQ12486 218 aa15.58■□□□□ 0.08
SHU1YHL006C ECM29P38737 1868 aa15.57■□□□□ 0.08
SHU1YHL006C AAP1P37898 856 aaKnown RBP15.57■□□□□ 0.08
SHU1YHL006C SSF2Q12153 453 aaPredicted RBP15.57■□□□□ 0.08
SHU1YHL006C SUT2Q12286 268 aa15.57■□□□□ 0.08
SHU1YHL006C VAS1P07806 1104 aaKnown RBP15.56■□□□□ 0.08
SHU1YHL006C SAM1P10659 382 aaKnown RBP15.56■□□□□ 0.08
SHU1YHL006C PHO88P38264 188 aaPredicted RBP15.56■□□□□ 0.08
SHU1YHL006C PTK2P47116 818 aaKnown RBP15.56■□□□□ 0.08
SHU1YHL006C FOL1P53848 824 aa15.56■□□□□ 0.08
SHU1YHL006C RAD50P12753 1312 aa15.56■□□□□ 0.08
SHU1YHL006C AFG3P39925 761 aa15.55■□□□□ 0.08
SHU1YHL006C YAF9P53930 226 aa15.55■□□□□ 0.08
SHU1YHL006C VPS30Q02948 557 aa15.55■□□□□ 0.08
SHU1YHL006C BUL2Q03758 920 aaKnown RBP15.55■□□□□ 0.08
SHU1YHL006C SKI2P35207 1287 aaKnown RBP RIP-Chip data15.54■□□□□ 0.08not detected
SHU1YHL006C YKR018CP36114 725 aa15.54■□□□□ 0.08
SHU1YHL006C TMA64Q04600 565 aaKnown RBP15.54■□□□□ 0.08
SHU1YHL006C SRP40P32583 406 aaPredicted RBP15.53■□□□□ 0.08
SHU1YHL006C RGT1P32862 1170 aa15.53■□□□□ 0.08
SHU1YHL006C TGL1P34163 548 aa15.53■□□□□ 0.08
SHU1YHL006C CDC19P00549 500 aaKnown RBP15.52■□□□□ 0.08
SHU1YHL006C BCS1P32839 456 aa15.52■□□□□ 0.08
SHU1YHL006C SHP1P34223 423 aa15.52■□□□□ 0.08
SHU1YHL006C PES4P39684 611 aa15.52■□□□□ 0.08
SHU1YHL006C AIM21P40563 679 aa15.52■□□□□ 0.08
SHU1YHL006C YGR125WP53273 1036 aa15.52■□□□□ 0.08
SHU1YHL006C FPR4Q06205 392 aaPredicted RBP15.52■□□□□ 0.08
SHU1YHL006C SPN1Q06505 410 aaPredicted RBP15.52■□□□□ 0.08
SHU1YHL006C NUC1P08466 329 aa15.51■□□□□ 0.07
SHU1YHL006C RER2P35196 286 aa15.51■□□□□ 0.07
SHU1YHL006C CRG1P38892 291 aaRIP-Chip data15.51■□□□□ 0.07not detected
SHU1YHL006C YJR107WP47145 328 aa15.51■□□□□ 0.07
SHU1YHL006C SUE1Q06524 206 aa15.51■□□□□ 0.07
SHU1YHL006C UIP5P36137 443 aa15.5■□□□□ 0.07
SHU1YHL006C VPS45P38932 577 aa15.5■□□□□ 0.07
SHU1YHL006C RPT6Q01939 405 aaKnown RBP15.5■□□□□ 0.07
SHU1YHL006C CSC1Q06538 782 aa15.5■□□□□ 0.07
SHU1YHL006C MDM20Q12387 796 aaKnown RBP15.5■□□□□ 0.07
SHU1YHL006C RPL8BP29453 256 aaKnown RBP15.49■□□□□ 0.07
SHU1YHL006C TOM71P38825 639 aaKnown RBP15.49■□□□□ 0.07
SHU1YHL006C CLA4P48562 842 aa15.49■□□□□ 0.07
SHU1YHL006C ECM30Q06673 1274 aa15.49■□□□□ 0.07
SHU1YHL006C UTP4Q06679 776 aaKnown RBP15.49■□□□□ 0.07
SHU1YHL006C MAM3Q12296 706 aa15.49■□□□□ 0.07
SHU1YHL006C VPS29P38759 282 aa15.48■□□□□ 0.07
SHU1YHL006C MYO5Q04439 1219 aaKnown RBP15.48■□□□□ 0.07
SHU1YHL006C DUS3Q06053 668 aaKnown RBP15.48■□□□□ 0.07
SHU1YHL006C SPH1Q06160 661 aa15.48■□□□□ 0.07
SHU1YHL006C DBP1P24784 617 aaKnown RBP15.47■□□□□ 0.07
SHU1YHL006C CSM2P40465 213 aa15.47■□□□□ 0.07
SHU1YHL006C SLD5Q03406 294 aa15.47■□□□□ 0.07
SHU1YHL006C PGA3Q12746 312 aaKnown RBP15.47■□□□□ 0.07
SHU1YHL006C SRP54P20424 541 aaKnown RBP15.46■□□□□ 0.07
SHU1YHL006C MAK31P23059 88 aa15.46■□□□□ 0.07
SHU1YHL006C IMP2'P32351 346 aa15.46■□□□□ 0.07
SHU1YHL006C BRN1P38170 754 aa15.45■□□□□ 0.06
SHU1YHL006C KSP1P38691 1029 aaKnown RBP15.45■□□□□ 0.06
SHU1YHL006C CIC1P38779 376 aaKnown RBP15.45■□□□□ 0.06
SHU1YHL006C FIR1P40020 876 aa15.45■□□□□ 0.06
SHU1YHL006C YGL039WP53183 348 aaKnown RBP15.45■□□□□ 0.06
SHU1YHL006C TFC6Q06339 672 aa15.45■□□□□ 0.06
SHU1YHL006C ERP3Q12403 225 aa15.45■□□□□ 0.06
SHU1YHL006C YDR461C-AQ2V2P7 80 aa15.45■□□□□ 0.06
SHU1YHL006C TAO3P40468 2376 aa15.44■□□□□ 0.06
SHU1YHL006C YUR1P26725 428 aa15.44■□□□□ 0.06
SHU1YHL006C NDT80P38830 627 aa15.44■□□□□ 0.06
SHU1YHL006C SCS3P53012 380 aa15.44■□□□□ 0.06
SHU1YHL006C YPL034WQ03083 165 aa15.44■□□□□ 0.06
SHU1YHL006C ISW2Q08773 1120 aa15.44■□□□□ 0.06
SHU1YHL006C MSC6Q08818 692 aaKnown RBP15.44■□□□□ 0.06
SHU1YHL006C MCR1P36060 302 aaKnown RBP15.43■□□□□ 0.06
SHU1YHL006C CLF1Q12309 687 aaPredicted RBP15.43■□□□□ 0.06
SHU1YHL006C PHR1P05066 565 aaKnown RBP RIP-Chip data15.41■□□□□ 0.06not detected
SHU1YHL006C KTR2P33550 425 aa15.41■□□□□ 0.06
SHU1YHL006C HXT17P53631 564 aa15.41■□□□□ 0.06
SHU1YHL006C PEP3P27801 918 aa15.4■□□□□ 0.06
SHU1YHL006C YKR023WP36119 530 aaKnown RBP15.4■□□□□ 0.06
SHU1YHL006C DBP7P36120 742 aaKnown RBP15.4■□□□□ 0.06
SHU1YHL006C NOC2P39744 710 aaKnown RBP15.4■□□□□ 0.06
SHU1YHL006C MDM1Q01846 1127 aa15.4■□□□□ 0.06
SHU1YHL006C RKM4Q12504 494 aa15.4■□□□□ 0.06
SHU1YHL006C TKL1P23254 680 aaKnown RBP15.39■□□□□ 0.05
SHU1YHL006C SKP2P42843 763 aa15.39■□□□□ 0.05
SHU1YHL006C LSB1P53281 241 aa15.39■□□□□ 0.05
SHU1YHL006C YMR321CQ04898 105 aa15.39■□□□□ 0.05
SHU1YHL006C EST2Q06163 884 aa15.39■□□□□ 0.05
SHU1YHL006C GUD1Q07729 489 aa15.39■□□□□ 0.05
SHU1YHL006C MYO1P08964 1928 aa15.39■□□□□ 0.05
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms