RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W UBP10P53874 792 aaPredicted RBP9□□□□□ -0.97
SHC1YER096W PEX19Q07418 342 aa9□□□□□ -0.97
SHC1YER096W PSK2Q08217 1101 aa9□□□□□ -0.97
SHC1YER096W MPH3P0CE00 602 aa9□□□□□ -0.97
SHC1YER096W PRE8P23639 250 aa9□□□□□ -0.97
SHC1YER096W RDS1P25611 832 aa9□□□□□ -0.97
SHC1YER096W TTI1P36097 1038 aa9□□□□□ -0.97
SHC1YER096W MAL33P38157 468 aa9□□□□□ -0.97
SHC1YER096W RFC5P38251 354 aa9□□□□□ -0.97
SHC1YER096W BUD6P41697 788 aa9□□□□□ -0.97
SHC1YER096W SKG3Q06315 1026 aa9□□□□□ -0.97
SHC1YER096W YDL124WQ07551 312 aaKnown RBP9□□□□□ -0.97
SHC1YER096W CDC6P09119 513 aa8.99□□□□□ -0.97
SHC1YER096W KIN1P13185 1064 aa8.99□□□□□ -0.97
SHC1YER096W FRS2P15625 503 aaKnown RBP8.99□□□□□ -0.97
SHC1YER096W DIT2P21595 489 aa8.99□□□□□ -0.97
SHC1YER096W SRM1P21827 482 aa8.99□□□□□ -0.97
SHC1YER096W HYR1P40581 163 aaKnown RBP8.99□□□□□ -0.97
SHC1YER096W PUS5Q06244 254 aa8.99□□□□□ -0.97
SHC1YER096W PMA1P05030 918 aaKnown RBP8.98□□□□□ -0.97
SHC1YER096W RNR3P21672 869 aaKnown RBP8.98□□□□□ -0.97
SHC1YER096W RAD53P22216 821 aa8.98□□□□□ -0.97
SHC1YER096W RTG2P32608 588 aaKnown RBP8.98□□□□□ -0.97
SHC1YER096W YBL028CP38202 106 aa8.98□□□□□ -0.97
SHC1YER096W VPS8P39702 1274 aa8.98□□□□□ -0.97
SHC1YER096W EMP47P43555 445 aa8.98□□□□□ -0.97
SHC1YER096W RPT6Q01939 405 aaKnown RBP8.98□□□□□ -0.97
SHC1YER096W AIM7Q12156 149 aa8.98□□□□□ -0.97
SHC1YER096W CBP3P21560 335 aa8.97□□□□□ -0.97
SHC1YER096W BMH2P34730 273 aaKnown RBP8.97□□□□□ -0.97
SHC1YER096W PCI8P40512 444 aa8.97□□□□□ -0.97
SHC1YER096W DCS2Q12123 353 aa8.97□□□□□ -0.97
SHC1YER096W MET6P05694 767 aaKnown RBP8.96□□□□□ -0.97
SHC1YER096W KEX1P09620 729 aa8.96□□□□□ -0.97
SHC1YER096W SAM2P19358 384 aaKnown RBP8.96□□□□□ -0.97
SHC1YER096W RXT2P38255 430 aa8.96□□□□□ -0.97
SHC1YER096W RVS167P39743 482 aaKnown RBP8.96□□□□□ -0.97
SHC1YER096W PEX14P53112 341 aa8.96□□□□□ -0.97
SHC1YER096W KRE33P53914 1056 aaKnown RBP8.96□□□□□ -0.97
SHC1YER096W TUS1Q06412 1307 aa8.96□□□□□ -0.97
SHC1YER096W HSP82P02829 709 aaKnown RBP8.95□□□□□ -0.98
SHC1YER096W KNS1P32350 737 aaPredicted RBP8.95□□□□□ -0.98
SHC1YER096W SIS2P36024 562 aa8.95□□□□□ -0.98
SHC1YER096W ARL1P38116 183 aaKnown RBP8.95□□□□□ -0.98
SHC1YER096W VPS30Q02948 557 aa8.95□□□□□ -0.98
SHC1YER096W SUE1Q06524 206 aa8.95□□□□□ -0.98
SHC1YER096W APC11Q12157 165 aa8.95□□□□□ -0.98
SHC1YER096W STI1P15705 589 aaKnown RBP RIP-Chip data8.95□□□□□ -0.98not detected
SHC1YER096W RPL8BP29453 256 aaKnown RBP8.95□□□□□ -0.98
SHC1YER096W MAL31P38156 614 aa8.95□□□□□ -0.98
SHC1YER096W CST26P38226 397 aa8.95□□□□□ -0.98
SHC1YER096W NIT1P40447 199 aa8.95□□□□□ -0.98
SHC1YER096W FOL1P53848 824 aa8.95□□□□□ -0.98
SHC1YER096W NUC1P08466 329 aa8.94□□□□□ -0.98
SHC1YER096W CLC1P17891 233 aa8.94□□□□□ -0.98
SHC1YER096W DID4P36108 232 aa8.94□□□□□ -0.98
SHC1YER096W TIF4631P39935 952 aaKnown RBP8.94□□□□□ -0.98
SHC1YER096W LAP2Q10740 671 aa8.94□□□□□ -0.98
SHC1YER096W GET3Q12154 354 aaKnown RBP8.94□□□□□ -0.98
SHC1YER096W CSR2Q12734 1121 aa8.94□□□□□ -0.98
SHC1YER096W KRS1P15180 591 aaKnown RBP8.93□□□□□ -0.98
SHC1YER096W ALG2P43636 503 aa8.93□□□□□ -0.98
SHC1YER096W GIS4Q04233 774 aa8.93□□□□□ -0.98
SHC1YER096W YDR341CQ05506 607 aaKnown RBP8.93□□□□□ -0.98
SHC1YER096W DSE3Q08729 430 aa8.93□□□□□ -0.98
SHC1YER096W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.93□□□□□ -0.98not detected
SHC1YER096W CIT1P00890 479 aa8.92□□□□□ -0.98
SHC1YER096W URA1P28272 314 aaPredicted RBP8.92□□□□□ -0.98
SHC1YER096W MCM4P30665 933 aaKnown RBP8.92□□□□□ -0.98
SHC1YER096W ELM1P32801 640 aa8.92□□□□□ -0.98
SHC1YER096W NDT80P38830 627 aa8.92□□□□□ -0.98
SHC1YER096W CCT5P40413 562 aaKnown RBP8.92□□□□□ -0.98
SHC1YER096W YGL138CP53122 345 aa8.92□□□□□ -0.98
SHC1YER096W PIL1P53252 339 aaKnown RBP8.92□□□□□ -0.98
SHC1YER096W MDM1Q01846 1127 aa8.92□□□□□ -0.98
SHC1YER096W GDE1Q02979 1223 aa8.92□□□□□ -0.98
SHC1YER096W AIM44Q99299 758 aa8.92□□□□□ -0.98
SHC1YER096W FKS1P38631 1876 aaKnown RBP8.91□□□□□ -0.98
SHC1YER096W PGI1P12709 554 aaKnown RBP8.91□□□□□ -0.98
SHC1YER096W RPN12P32496 274 aa8.91□□□□□ -0.98
SHC1YER096W PNT1P38969 423 aa8.91□□□□□ -0.98
SHC1YER096W UBP9P39967 754 aa8.91□□□□□ -0.98
SHC1YER096W SNU71P53207 620 aaKnown RBP8.91□□□□□ -0.98
SHC1YER096W PTC5Q12511 572 aa8.91□□□□□ -0.98
SHC1YER096W ACA1P39970 489 aa8.9□□□□□ -0.98
SHC1YER096W ASE1P50275 885 aa8.9□□□□□ -0.98
SHC1YER096W PEX29Q03370 554 aa8.9□□□□□ -0.99
SHC1YER096W COG8Q04632 607 aa8.9□□□□□ -0.99
SHC1YER096W DDP1Q99321 188 aaKnown RBP8.9□□□□□ -0.99
SHC1YER096W TRS33Q99394 268 aa8.9□□□□□ -0.99
SHC1YER096W HXK1P04806 485 aaKnown RBP8.89□□□□□ -0.99
SHC1YER096W RGP1P16664 663 aa8.89□□□□□ -0.99
SHC1YER096W RFT1P38206 574 aaPredicted RBP8.89□□□□□ -0.99
SHC1YER096W RKM3P38222 552 aa8.89□□□□□ -0.99
SHC1YER096W VHR2P40041 505 aa8.89□□□□□ -0.99
SHC1YER096W PEA2P40091 420 aa8.89□□□□□ -0.99
SHC1YER096W NAF1P53919 492 aaKnown RBP8.89□□□□□ -0.99
SHC1YER096W SSL2Q00578 843 aa8.89□□□□□ -0.99
SHC1YER096W CLF1Q12309 687 aaPredicted RBP8.89□□□□□ -0.99
SHC1YER096W GPA1P08539 472 aa8.88□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms